RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
RGPD3-201ENST00000304514 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
RGPD3-201ENST00000304514 COL6A5A8TX70 2615 aa4.22□□□□□ -1.73
RGPD3-201ENST00000304514 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
RGPD3-201ENST00000304514 LY6G6CO95867 125 aa4.21□□□□□ -1.74
RGPD3-201ENST00000304514 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
RGPD3-201ENST00000304514 IGHV6-1A0A0B4J1U7 121 aa4.21□□□□□ -1.74
RGPD3-201ENST00000304514 HSPG2P98160 4391 aa4.2□□□□□ -1.74
RGPD3-201ENST00000304514 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
RGPD3-201ENST00000304514 MRPL34Q9BQ48 92 aaKnown RBP4.2□□□□□ -1.74
RGPD3-201ENST00000304514 KRTAP13-2Q52LG2 175 aa4.19□□□□□ -1.74
RGPD3-201ENST00000304514 STAB2Q8WWQ8 2551 aa4.19□□□□□ -1.74
RGPD3-201ENST00000304514 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
RGPD3-201ENST00000304514 PRR4Q16378 134 aa4.19□□□□□ -1.74
RGPD3-201ENST00000304514 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
RGPD3-201ENST00000304514 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
RGPD3-201ENST00000304514 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
RGPD3-201ENST00000304514 TNXBP22105 4242 aa4.17□□□□□ -1.74
RGPD3-201ENST00000304514 SSBP3-AS1Q7Z2R9 100 aa4.16□□□□□ -1.74
RGPD3-201ENST00000304514 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
RGPD3-201ENST00000304514 Q5W150 140 aa4.15□□□□□ -1.74
RGPD3-201ENST00000304514 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.75
RGPD3-201ENST00000304514 CDK2AP2O75956 126 aa4.15□□□□□ -1.75
RGPD3-201ENST00000304514 COA5Q86WW8 74 aa4.14□□□□□ -1.75
RGPD3-201ENST00000304514 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
RGPD3-201ENST00000304514 NDUFS5O43920 106 aa4.13□□□□□ -1.75
RGPD3-201ENST00000304514 RYR2Q92736 4967 aa4.13□□□□□ -1.75
RGPD3-201ENST00000304514 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
RGPD3-201ENST00000304514 Q5VV11 94 aa4.13□□□□□ -1.75
RGPD3-201ENST00000304514 KRTAP21-3Q3LHN1 58 aa4.12□□□□□ -1.75
RGPD3-201ENST00000304514 C1orf195Q5TG92 126 aa4.12□□□□□ -1.75
RGPD3-201ENST00000304514 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
RGPD3-201ENST00000304514 V9GYY9 64 aa4.11□□□□□ -1.75
RGPD3-201ENST00000304514 LOC101927531A0A1B0GV80 90 aa4.11□□□□□ -1.75
RGPD3-201ENST00000304514 HRES1P13985 223 aa4.11□□□□□ -1.75
RGPD3-201ENST00000304514 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
RGPD3-201ENST00000304514 PSPHP1O15172 72 aa4.1□□□□□ -1.75
RGPD3-201ENST00000304514 SPINK6Q6UWN8 80 aa4.1□□□□□ -1.75
RGPD3-201ENST00000304514 LINC00313P59037 77 aa4.09□□□□□ -1.75
RGPD3-201ENST00000304514 A8MUN3 132 aa4.09□□□□□ -1.75
RGPD3-201ENST00000304514 MGAM2Q2M2H8 2515 aa4.09□□□□□ -1.76
RGPD3-201ENST00000304514 LIMD2Q9BT23 127 aa4.08□□□□□ -1.76
RGPD3-201ENST00000304514 Q75L30 129 aa4.08□□□□□ -1.76
RGPD3-201ENST00000304514 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
RGPD3-201ENST00000304514 FAT1Q14517 4588 aa4.07□□□□□ -1.76
RGPD3-201ENST00000304514 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
RGPD3-201ENST00000304514 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
RGPD3-201ENST00000304514 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
RGPD3-201ENST00000304514 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
RGPD3-201ENST00000304514 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
RGPD3-201ENST00000304514 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
RGPD3-201ENST00000304514 A8MU10 97 aa4.04□□□□□ -1.76
RGPD3-201ENST00000304514 FAM229AH3BQW9 127 aa4.04□□□□□ -1.76
RGPD3-201ENST00000304514 SPINK1P00995 79 aa4.02□□□□□ -1.77
RGPD3-201ENST00000304514 PLA2G1BP04054 148 aaKnown RBP4.02□□□□□ -1.77
RGPD3-201ENST00000304514 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
RGPD3-201ENST00000304514 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
RGPD3-201ENST00000304514 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
RGPD3-201ENST00000304514 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
RGPD3-201ENST00000304514 LCA10Q71F78 164 aa4□□□□□ -1.77
RGPD3-201ENST00000304514 TGP01266 2768 aa4□□□□□ -1.77
RGPD3-201ENST00000304514 ACYP2P14621 99 aa4□□□□□ -1.77
RGPD3-201ENST00000304514 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
RGPD3-201ENST00000304514 LINC00304Q8N9R0 145 aa3.98□□□□□ -1.77
RGPD3-201ENST00000304514 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
RGPD3-201ENST00000304514 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
RGPD3-201ENST00000304514 SPINK7P58062 85 aa3.96□□□□□ -1.78
RGPD3-201ENST00000304514 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
RGPD3-201ENST00000304514 C4orf48Q5BLP8 95 aa3.95□□□□□ -1.78
RGPD3-201ENST00000304514 RYR3Q15413 4870 aa3.94□□□□□ -1.78
RGPD3-201ENST00000304514 LRP1Q07954 4544 aaKnown RBP3.94□□□□□ -1.78
RGPD3-201ENST00000304514 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
RGPD3-201ENST00000304514 A6NN06 94 aa3.93□□□□□ -1.78
RGPD3-201ENST00000304514 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
RGPD3-201ENST00000304514 A6NED7 52 aa3.93□□□□□ -1.78
RGPD3-201ENST00000304514 A8MUU9 505 aa3.93□□□□□ -1.78
RGPD3-201ENST00000304514 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
RGPD3-201ENST00000304514 C7orf65Q6ZTY9 151 aa3.91□□□□□ -1.78
RGPD3-201ENST00000304514 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
RGPD3-201ENST00000304514 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
RGPD3-201ENST00000304514 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
RGPD3-201ENST00000304514 RYR1P21817 5038 aa3.86□□□□□ -1.79
RGPD3-201ENST00000304514 A0A1B0GU69 56 aa3.86□□□□□ -1.79
RGPD3-201ENST00000304514 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
RGPD3-201ENST00000304514 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
RGPD3-201ENST00000304514 Q8N1X5 172 aa3.85□□□□□ -1.79
RGPD3-201ENST00000304514 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
RGPD3-201ENST00000304514 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.79
RGPD3-201ENST00000304514 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
RGPD3-201ENST00000304514 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
RGPD3-201ENST00000304514 LPAP08519 4548 aa3.82□□□□□ -1.8
RGPD3-201ENST00000304514 MIR22HGQ0VDD5 57 aa3.79□□□□□ -1.8
RGPD3-201ENST00000304514 Q5VSD8 79 aa3.78□□□□□ -1.8
RGPD3-201ENST00000304514 MUC17Q685J3 4493 aa3.78□□□□□ -1.8
RGPD3-201ENST00000304514 UQCR11O14957 56 aa3.77□□□□□ -1.81
RGPD3-201ENST00000304514 RPL37P61927 97 aaKnown RBP3.75□□□□□ -1.81
RGPD3-201ENST00000304514 H0YAA0 97 aa3.75□□□□□ -1.81
RGPD3-201ENST00000304514 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
RGPD3-201ENST00000304514 EPPK1P58107 5090 aaKnown RBP3.75□□□□□ -1.81
RGPD3-201ENST00000304514 XP32Q5T750 250 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms