RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 RYR2Q92736 4967 aa8.53□□□□□ -1.04
SHCBP1-201ENST00000303383 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
SHCBP1-201ENST00000303383 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
SHCBP1-201ENST00000303383 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
SHCBP1-201ENST00000303383 KLKP1Q107X0 134 aa8.52□□□□□ -1.05
SHCBP1-201ENST00000303383 KMT2CQ8NEZ4 4911 aaKnown RBP8.52□□□□□ -1.05
SHCBP1-201ENST00000303383 CASC2Q6XLA1 102 aa8.5□□□□□ -1.05
SHCBP1-201ENST00000303383 Q96NJ1 140 aa8.49□□□□□ -1.05
SHCBP1-201ENST00000303383 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
SHCBP1-201ENST00000303383 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
SHCBP1-201ENST00000303383 FAM229AH3BQW9 127 aa8.48□□□□□ -1.05
SHCBP1-201ENST00000303383 ATP5EP56381 51 aaPredicted RBP8.48□□□□□ -1.05
SHCBP1-201ENST00000303383 VPS13BQ7Z7G8 4022 aa8.47□□□□□ -1.05
SHCBP1-201ENST00000303383 LIMD2Q9BT23 127 aa8.46□□□□□ -1.05
SHCBP1-201ENST00000303383 OCR1Q9BZK8 76 aa8.45□□□□□ -1.06
SHCBP1-201ENST00000303383 A8MU10 97 aa8.44□□□□□ -1.06
SHCBP1-201ENST00000303383 A0A1B0GVX0 72 aa8.44□□□□□ -1.06
SHCBP1-201ENST00000303383 hDV103S1A0JD37 113 aa8.43□□□□□ -1.06
SHCBP1-201ENST00000303383 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
SHCBP1-201ENST00000303383 A8MUN3 132 aa8.41□□□□□ -1.06
SHCBP1-201ENST00000303383 MMP24-AS1A0A0U1RRL7 71 aa8.41□□□□□ -1.06
SHCBP1-201ENST00000303383 NDUFC1O43677 76 aa8.41□□□□□ -1.06
SHCBP1-201ENST00000303383 TMEM254Q8TBM7 123 aa8.41□□□□□ -1.06
SHCBP1-201ENST00000303383 NDUFS5O43920 106 aa8.4□□□□□ -1.06
SHCBP1-201ENST00000303383 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
SHCBP1-201ENST00000303383 PSPHP1O15172 72 aa8.4□□□□□ -1.06
SHCBP1-201ENST00000303383 SPINK1P00995 79 aa8.4□□□□□ -1.06
SHCBP1-201ENST00000303383 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
SHCBP1-201ENST00000303383 KRTAP29-1A8MX34 341 aaPredicted RBP8.39□□□□□ -1.07
SHCBP1-201ENST00000303383 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
SHCBP1-201ENST00000303383 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
SHCBP1-201ENST00000303383 MP68P56378 58 aa8.36□□□□□ -1.07
SHCBP1-201ENST00000303383 Q5VSD8 79 aa8.35□□□□□ -1.07
SHCBP1-201ENST00000303383 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
SHCBP1-201ENST00000303383 Q1T7F1 81 aa8.35□□□□□ -1.07
SHCBP1-201ENST00000303383 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
SHCBP1-201ENST00000303383 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
SHCBP1-201ENST00000303383 LCA10Q71F78 164 aa8.33□□□□□ -1.08
SHCBP1-201ENST00000303383 MRPL34Q9BQ48 92 aaKnown RBP8.33□□□□□ -1.08
SHCBP1-201ENST00000303383 FAT1Q14517 4588 aa8.32□□□□□ -1.08
SHCBP1-201ENST00000303383 LINC00313P59037 77 aa8.31□□□□□ -1.08
SHCBP1-201ENST00000303383 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
SHCBP1-201ENST00000303383 TP53AIP1Q9HCN2 124 aa8.3□□□□□ -1.08
SHCBP1-201ENST00000303383 H0Y9P7 68 aa8.3□□□□□ -1.08
SHCBP1-201ENST00000303383 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
SHCBP1-201ENST00000303383 LINC00208Q96KT6 92 aa8.28□□□□□ -1.08
SHCBP1-201ENST00000303383 RYR3Q15413 4870 aa8.28□□□□□ -1.08
SHCBP1-201ENST00000303383 A6NN06 94 aa8.27□□□□□ -1.09
SHCBP1-201ENST00000303383 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.09
SHCBP1-201ENST00000303383 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.09
SHCBP1-201ENST00000303383 H3BPC8 53 aa8.22□□□□□ -1.09
SHCBP1-201ENST00000303383 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
SHCBP1-201ENST00000303383 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
SHCBP1-201ENST00000303383 Q5VV11 94 aa8.17□□□□□ -1.1
SHCBP1-201ENST00000303383 Q8N1X5 172 aa8.17□□□□□ -1.1
SHCBP1-201ENST00000303383 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
SHCBP1-201ENST00000303383 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
SHCBP1-201ENST00000303383 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
SHCBP1-201ENST00000303383 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
SHCBP1-201ENST00000303383 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
SHCBP1-201ENST00000303383 HSPG2P98160 4391 aa8.13□□□□□ -1.11
SHCBP1-201ENST00000303383 Q8N9P0 234 aaPredicted RBP8.11□□□□□ -1.11
SHCBP1-201ENST00000303383 J3QL48 77 aa8.1□□□□□ -1.11
SHCBP1-201ENST00000303383 PCOTHQ58A44 107 aa8.1□□□□□ -1.11
SHCBP1-201ENST00000303383 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
SHCBP1-201ENST00000303383 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
SHCBP1-201ENST00000303383 RYR1P21817 5038 aa8.1□□□□□ -1.11
SHCBP1-201ENST00000303383 PRR4Q16378 134 aa8.1□□□□□ -1.11
SHCBP1-201ENST00000303383 DMBT1Q9UGM3 2413 aaPredicted RBP8.09□□□□□ -1.11
SHCBP1-201ENST00000303383 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
SHCBP1-201ENST00000303383 Q5W150 140 aa8.08□□□□□ -1.12
SHCBP1-201ENST00000303383 LOC101927531A0A1B0GV80 90 aa8.08□□□□□ -1.12
SHCBP1-201ENST00000303383 PRAC1Q96KF2 57 aa8.08□□□□□ -1.12
SHCBP1-201ENST00000303383 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
SHCBP1-201ENST00000303383 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
SHCBP1-201ENST00000303383 A6NED7 52 aa8.02□□□□□ -1.13
SHCBP1-201ENST00000303383 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
SHCBP1-201ENST00000303383 SPANXA2-OT1Q8N9U9 137 aa8.01□□□□□ -1.13
SHCBP1-201ENST00000303383 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
SHCBP1-201ENST00000303383 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
SHCBP1-201ENST00000303383 PRR15LQ9BU68 103 aa7.99□□□□□ -1.13
SHCBP1-201ENST00000303383 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
SHCBP1-201ENST00000303383 IGKV2-30P06310 120 aa7.99□□□□□ -1.13
SHCBP1-201ENST00000303383 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
SHCBP1-201ENST00000303383 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
SHCBP1-201ENST00000303383 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
SHCBP1-201ENST00000303383 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
SHCBP1-201ENST00000303383 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
SHCBP1-201ENST00000303383 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
SHCBP1-201ENST00000303383 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
SHCBP1-201ENST00000303383 Q75L30 129 aa7.92□□□□□ -1.14
SHCBP1-201ENST00000303383 A8MUU9 505 aa7.91□□□□□ -1.14
SHCBP1-201ENST00000303383 KRTAP4-5Q9BYR2 181 aa7.9□□□□□ -1.15
SHCBP1-201ENST00000303383 TNXBP22105 4242 aa7.9□□□□□ -1.15
SHCBP1-201ENST00000303383 HRES1P13985 223 aa7.88□□□□□ -1.15
SHCBP1-201ENST00000303383 FAT3Q8TDW7 4589 aa7.87□□□□□ -1.15
SHCBP1-201ENST00000303383 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
SHCBP1-201ENST00000303383 COA5Q86WW8 74 aa7.83□□□□□ -1.16
SHCBP1-201ENST00000303383 ACYP2P14621 99 aa7.81□□□□□ -1.16
SHCBP1-201ENST00000303383 XP32Q5T750 250 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms