RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 Q75L30 129 aa5.9□□□□□ -1.46
TRIM44-201ENST00000299413 USP34Q70CQ2 3546 aa5.9□□□□□ -1.47
TRIM44-201ENST00000299413 CDH23Q9H251 3354 aa5.89□□□□□ -1.47
TRIM44-201ENST00000299413 H3BS24 57 aa5.89□□□□□ -1.47
TRIM44-201ENST00000299413 ROMO1P60602 79 aa5.89□□□□□ -1.47
TRIM44-201ENST00000299413 FP248Q71RG6 208 aaPredicted RBP5.88□□□□□ -1.47
TRIM44-201ENST00000299413 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
TRIM44-201ENST00000299413 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
TRIM44-201ENST00000299413 PANO1I0J062 215 aa5.86□□□□□ -1.47
TRIM44-201ENST00000299413 A0A087X002 238 aa5.84□□□□□ -1.47
TRIM44-201ENST00000299413 NBPF19A0A087WUL8 3843 aa5.82□□□□□ -1.48
TRIM44-201ENST00000299413 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
TRIM44-201ENST00000299413 Q6ZR54 194 aa5.81□□□□□ -1.48
TRIM44-201ENST00000299413 SPTBN5Q9NRC6 3674 aaKnown RBP5.8□□□□□ -1.48
TRIM44-201ENST00000299413 TGP01266 2768 aa5.8□□□□□ -1.48
TRIM44-201ENST00000299413 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
TRIM44-201ENST00000299413 A8MUU9 505 aa5.8□□□□□ -1.48
TRIM44-201ENST00000299413 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
TRIM44-201ENST00000299413 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
TRIM44-201ENST00000299413 Q5VV11 94 aa5.78□□□□□ -1.48
TRIM44-201ENST00000299413 SPRR1BP22528 89 aa5.78□□□□□ -1.48
TRIM44-201ENST00000299413 CYSTM1Q9H1C7 97 aa5.78□□□□□ -1.48
TRIM44-201ENST00000299413 MYO15AQ9UKN7 3530 aa5.76□□□□□ -1.49
TRIM44-201ENST00000299413 ZFHX3Q15911 3703 aa5.75□□□□□ -1.49
TRIM44-201ENST00000299413 A8MU10 97 aa5.75□□□□□ -1.49
TRIM44-201ENST00000299413 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
TRIM44-201ENST00000299413 SPRR1AP35321 89 aa5.73□□□□□ -1.49
TRIM44-201ENST00000299413 MXRA5Q9NR99 2828 aa5.72□□□□□ -1.49
TRIM44-201ENST00000299413 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
TRIM44-201ENST00000299413 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
TRIM44-201ENST00000299413 WDFY3Q8IZQ1 3526 aa5.69□□□□□ -1.5
TRIM44-201ENST00000299413 MEGF8Q7Z7M0 2845 aa5.68□□□□□ -1.5
TRIM44-201ENST00000299413 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
TRIM44-201ENST00000299413 LOC400499M0QZD8 3231 aa5.66□□□□□ -1.5
TRIM44-201ENST00000299413 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.5
TRIM44-201ENST00000299413 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
TRIM44-201ENST00000299413 Q5XG85 94 aa5.64□□□□□ -1.51
TRIM44-201ENST00000299413 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
TRIM44-201ENST00000299413 LAMA5O15230 3695 aa5.62□□□□□ -1.51
TRIM44-201ENST00000299413 ZFHX4Q86UP3 3567 aa5.62□□□□□ -1.51
TRIM44-201ENST00000299413 HRNRQ86YZ3 2850 aaPredicted RBP5.62□□□□□ -1.51
TRIM44-201ENST00000299413 DMDP11532 3685 aa5.57□□□□□ -1.52
TRIM44-201ENST00000299413 ASPMQ8IZT6 3477 aa5.56□□□□□ -1.52
TRIM44-201ENST00000299413 TNP1P09430 55 aa5.55□□□□□ -1.52
TRIM44-201ENST00000299413 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
TRIM44-201ENST00000299413 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
TRIM44-201ENST00000299413 NDUFAF8A1L188 74 aa5.52□□□□□ -1.53
TRIM44-201ENST00000299413 KRTAP16-1A8MUX0 517 aa5.5□□□□□ -1.53
TRIM44-201ENST00000299413 DCHS1Q96JQ0 3298 aa5.49□□□□□ -1.53
TRIM44-201ENST00000299413 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
TRIM44-201ENST00000299413 Q6ZRN7 208 aaPredicted RBP5.48□□□□□ -1.53
TRIM44-201ENST00000299413 SMG1Q96Q15 3661 aaKnown RBP5.45□□□□□ -1.54
TRIM44-201ENST00000299413 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
TRIM44-201ENST00000299413 P0C880 135 aa5.43□□□□□ -1.54
TRIM44-201ENST00000299413 KRTAP29-1A8MX34 341 aaPredicted RBP5.42□□□□□ -1.54
TRIM44-201ENST00000299413 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
TRIM44-201ENST00000299413 SPENQ96T58 3664 aaKnown RBP5.38□□□□□ -1.55
TRIM44-201ENST00000299413 KRTAP7-1Q8IUC3 87 aa5.37□□□□□ -1.55
TRIM44-201ENST00000299413 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
TRIM44-201ENST00000299413 XP32Q5T750 250 aa5.35□□□□□ -1.55
TRIM44-201ENST00000299413 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
TRIM44-201ENST00000299413 OTOGQ6ZRI0 2925 aa5.3□□□□□ -1.56
TRIM44-201ENST00000299413 RELNP78509 3460 aa5.26□□□□□ -1.57
TRIM44-201ENST00000299413 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
TRIM44-201ENST00000299413 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
TRIM44-201ENST00000299413 TRRAPQ9Y4A5 3859 aa5.24□□□□□ -1.57
TRIM44-201ENST00000299413 CSMD1Q96PZ7 3565 aa5.24□□□□□ -1.57
TRIM44-201ENST00000299413 VPS13CQ709C8 3753 aa5.24□□□□□ -1.57
TRIM44-201ENST00000299413 A6NN06 94 aa5.23□□□□□ -1.57
TRIM44-201ENST00000299413 KRTAP21-3Q3LHN1 58 aa5.21□□□□□ -1.58
TRIM44-201ENST00000299413 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
TRIM44-201ENST00000299413 CUBNO60494 3623 aa5.15□□□□□ -1.58
TRIM44-201ENST00000299413 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
TRIM44-201ENST00000299413 H0YAA0 97 aa5.13□□□□□ -1.59
TRIM44-201ENST00000299413 KRTAP1-4P0C5Y4 121 aa5.12□□□□□ -1.59
TRIM44-201ENST00000299413 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
TRIM44-201ENST00000299413 KRTAP13-3Q3SY46 172 aa5.06□□□□□ -1.6
TRIM44-201ENST00000299413 AKAP9Q99996 3911 aa5.02□□□□□ -1.61
TRIM44-201ENST00000299413 CSMD3Q7Z407 3707 aa5.01□□□□□ -1.61
TRIM44-201ENST00000299413 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
TRIM44-201ENST00000299413 SVEP1Q4LDE5 3571 aa4.93□□□□□ -1.62
TRIM44-201ENST00000299413 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
TRIM44-201ENST00000299413 CSMD2Q7Z408 3487 aa4.92□□□□□ -1.62
TRIM44-201ENST00000299413 MUC3AQ02505 3323 aa4.9□□□□□ -1.62
TRIM44-201ENST00000299413 LYSTQ99698 3801 aa4.85□□□□□ -1.63
TRIM44-201ENST00000299413 BSNQ9UPA5 3926 aa4.77□□□□□ -1.65
TRIM44-201ENST00000299413 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
TRIM44-201ENST00000299413 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
TRIM44-201ENST00000299413 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
TRIM44-201ENST00000299413 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
TRIM44-201ENST00000299413 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
TRIM44-201ENST00000299413 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
TRIM44-201ENST00000299413 DNAH1Q9P2D7 4330 aa4.59□□□□□ -1.68
TRIM44-201ENST00000299413 ANK3Q12955 4377 aaKnown RBP4.57□□□□□ -1.68
TRIM44-201ENST00000299413 ANK2Q01484 3957 aa4.55□□□□□ -1.68
TRIM44-201ENST00000299413 DNAH7Q8WXX0 4024 aa4.55□□□□□ -1.68
TRIM44-201ENST00000299413 VPS13BQ7Z7G8 4022 aa4.51□□□□□ -1.69
TRIM44-201ENST00000299413 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
TRIM44-201ENST00000299413 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
TRIM44-201ENST00000299413 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms