RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
TSC1-201ENST00000298552 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
TSC1-201ENST00000298552 Q6ZRN7 208 aaPredicted RBP4.19□□□□□ -1.74
TSC1-201ENST00000298552 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
TSC1-201ENST00000298552 WDFY4Q6ZS81 3184 aa4.19□□□□□ -1.74
TSC1-201ENST00000298552 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
TSC1-201ENST00000298552 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
TSC1-201ENST00000298552 HTTP42858 3142 aa4.17□□□□□ -1.74
TSC1-201ENST00000298552 NIPBLQ6KC79 2804 aaeCLIP4.15□□□□□ -1.75
TSC1-201ENST00000298552 CELSR3Q9NYQ7 3312 aa4.15□□□□□ -1.75
TSC1-201ENST00000298552 PDZD2O15018 2839 aa4.14□□□□□ -1.75
TSC1-201ENST00000298552 BRCA2P51587 3418 aa4.14□□□□□ -1.75
TSC1-201ENST00000298552 MXRA5Q9NR99 2828 aa4.12□□□□□ -1.75
TSC1-201ENST00000298552 ZANQ9Y493 2812 aa4.11□□□□□ -1.75
TSC1-201ENST00000298552 BOD1L1Q8NFC6 3051 aa4.1□□□□□ -1.75
TSC1-201ENST00000298552 CRYBG3Q68DQ2 2970 aa4.09□□□□□ -1.75
TSC1-201ENST00000298552 TGP01266 2768 aa4.08□□□□□ -1.76
TSC1-201ENST00000298552 DCHS2Q6V1P9 2916 aa4.08□□□□□ -1.76
TSC1-201ENST00000298552 KRTAP10-2P60368 255 aa4.07□□□□□ -1.76
TSC1-201ENST00000298552 FREM2Q5SZK8 3169 aa4.07□□□□□ -1.76
TSC1-201ENST00000298552 CDH23Q9H251 3354 aa4.06□□□□□ -1.76
TSC1-201ENST00000298552 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
TSC1-201ENST00000298552 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
TSC1-201ENST00000298552 UNC80Q8N2C7 3258 aa4.04□□□□□ -1.76
TSC1-201ENST00000298552 REV3LO60673 3130 aa4.03□□□□□ -1.76
TSC1-201ENST00000298552 CELSR2Q9HCU4 2923 aa4.02□□□□□ -1.77
TSC1-201ENST00000298552 DNAH14Q0VDD8 3507 aa4.02□□□□□ -1.77
TSC1-201ENST00000298552 ASH1LQ9NR48 2969 aaKnown RBP4.02□□□□□ -1.77
TSC1-201ENST00000298552 DMXL2Q8TDJ6 3036 aa4.02□□□□□ -1.77
TSC1-201ENST00000298552 DMXL1Q9Y485 3027 aa4.02□□□□□ -1.77
TSC1-201ENST00000298552 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
TSC1-201ENST00000298552 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
TSC1-201ENST00000298552 VWFP04275 2813 aa3.98□□□□□ -1.77
TSC1-201ENST00000298552 HRNRQ86YZ3 2850 aaPredicted RBP3.96□□□□□ -1.78
TSC1-201ENST00000298552 VCANP13611 3396 aa3.95□□□□□ -1.78
TSC1-201ENST00000298552 FBN2P35556 2912 aa3.95□□□□□ -1.78
TSC1-201ENST00000298552 COL6A3P12111 3177 aa3.94□□□□□ -1.78
TSC1-201ENST00000298552 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
TSC1-201ENST00000298552 ATMQ13315 3056 aa3.93□□□□□ -1.78
TSC1-201ENST00000298552 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
TSC1-201ENST00000298552 TENM4Q6N022 2769 aa3.92□□□□□ -1.78
TSC1-201ENST00000298552 MEGF8Q7Z7M0 2845 aa3.91□□□□□ -1.78
TSC1-201ENST00000298552 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
TSC1-201ENST00000298552 SZT2Q5T011 3432 aa3.91□□□□□ -1.78
TSC1-201ENST00000298552 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
TSC1-201ENST00000298552 COL12A1Q99715 3063 aa3.9□□□□□ -1.78
TSC1-201ENST00000298552 XP32Q5T750 250 aa3.9□□□□□ -1.79
TSC1-201ENST00000298552 SPTBN5Q9NRC6 3674 aaKnown RBP3.9□□□□□ -1.79
TSC1-201ENST00000298552 SPEGQ15772 3267 aa3.89□□□□□ -1.79
TSC1-201ENST00000298552 H0YAA0 97 aa3.89□□□□□ -1.79
TSC1-201ENST00000298552 PKD1L1Q8TDX9 2849 aa3.88□□□□□ -1.79
TSC1-201ENST00000298552 KRTAP13-1Q8IUC0 172 aa3.87□□□□□ -1.79
TSC1-201ENST00000298552 SPENQ96T58 3664 aaKnown RBP3.87□□□□□ -1.79
TSC1-201ENST00000298552 CFAP47Q6ZTR5 3102 aa3.86□□□□□ -1.79
TSC1-201ENST00000298552 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
TSC1-201ENST00000298552 OTOGQ6ZRI0 2925 aa3.85□□□□□ -1.79
TSC1-201ENST00000298552 EYSQ5T1H1 3165 aa3.84□□□□□ -1.8
TSC1-201ENST00000298552 MT3P25713 68 aa3.82□□□□□ -1.8
TSC1-201ENST00000298552 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
TSC1-201ENST00000298552 A0A1B0GVY2 172 aa3.81□□□□□ -1.8
TSC1-201ENST00000298552 WDFY3Q8IZQ1 3526 aa3.8□□□□□ -1.8
TSC1-201ENST00000298552 FBN1P35555 2871 aaKnown RBP3.79□□□□□ -1.8
TSC1-201ENST00000298552 CELSR1Q9NYQ6 3014 aa3.77□□□□□ -1.81
TSC1-201ENST00000298552 LOC400499M0QZD8 3231 aa3.77□□□□□ -1.81
TSC1-201ENST00000298552 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
TSC1-201ENST00000298552 COL7A1Q02388 2944 aa3.73□□□□□ -1.81
TSC1-201ENST00000298552 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
TSC1-201ENST00000298552 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
TSC1-201ENST00000298552 DMDP11532 3685 aa3.69□□□□□ -1.82
TSC1-201ENST00000298552 ZFHX4Q86UP3 3567 aa3.68□□□□□ -1.82
TSC1-201ENST00000298552 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
TSC1-201ENST00000298552 LAMA5O15230 3695 aa3.67□□□□□ -1.82
TSC1-201ENST00000298552 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
TSC1-201ENST00000298552 MYO15AQ9UKN7 3530 aa3.65□□□□□ -1.83
TSC1-201ENST00000298552 ASPMQ8IZT6 3477 aa3.64□□□□□ -1.83
TSC1-201ENST00000298552 ZFHX3Q15911 3703 aa3.62□□□□□ -1.83
TSC1-201ENST00000298552 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
TSC1-201ENST00000298552 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
TSC1-201ENST00000298552 MUC3AQ02505 3323 aa3.58□□□□□ -1.84
TSC1-201ENST00000298552 BSNQ9UPA5 3926 aa3.57□□□□□ -1.84
TSC1-201ENST00000298552 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
TSC1-201ENST00000298552 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
TSC1-201ENST00000298552 VPS13CQ709C8 3753 aa3.56□□□□□ -1.84
TSC1-201ENST00000298552 RELNP78509 3460 aa3.54□□□□□ -1.84
TSC1-201ENST00000298552 DCHS1Q96JQ0 3298 aa3.49□□□□□ -1.85
TSC1-201ENST00000298552 SMG1Q96Q15 3661 aaKnown RBP3.45□□□□□ -1.86
TSC1-201ENST00000298552 FBN3Q75N90 2809 aa3.44□□□□□ -1.86
TSC1-201ENST00000298552 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
TSC1-201ENST00000298552 TRRAPQ9Y4A5 3859 aa3.42□□□□□ -1.86
TSC1-201ENST00000298552 CSMD1Q96PZ7 3565 aa3.41□□□□□ -1.86
TSC1-201ENST00000298552 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
TSC1-201ENST00000298552 ZNF469Q96JG9 3925 aaPredicted RBP3.36□□□□□ -1.87
TSC1-201ENST00000298552 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
TSC1-201ENST00000298552 CSMD2Q7Z408 3487 aa3.28□□□□□ -1.89
TSC1-201ENST00000298552 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.89
TSC1-201ENST00000298552 LYSTQ99698 3801 aa3.27□□□□□ -1.89
TSC1-201ENST00000298552 HECTD4Q9Y4D8 3996 aa3.26□□□□□ -1.89
TSC1-201ENST00000298552 ANK2Q01484 3957 aa3.25□□□□□ -1.89
TSC1-201ENST00000298552 SVEP1Q4LDE5 3571 aa3.25□□□□□ -1.89
TSC1-201ENST00000298552 CUBNO60494 3623 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms