RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.41
SOX17-201ENST00000297316 SPINK6Q6UWN8 80 aa12.45□□□□□ -0.42
SOX17-201ENST00000297316 SSBP3-AS1Q7Z2R9 100 aa12.45□□□□□ -0.42
SOX17-201ENST00000297316 CASC2Q6XLA1 102 aa12.43□□□□□ -0.42
SOX17-201ENST00000297316 MMP24-AS1A0A0U1RRL7 71 aa12.43□□□□□ -0.42
SOX17-201ENST00000297316 MPLKIPQ8TAP9 179 aa12.43□□□□□ -0.42
SOX17-201ENST00000297316 HSPG2P98160 4391 aa12.41□□□□□ -0.42
SOX17-201ENST00000297316 hDV103S1A0JD37 113 aa12.39□□□□□ -0.43
SOX17-201ENST00000297316 NDUFB1O75438 58 aa12.39□□□□□ -0.43
SOX17-201ENST00000297316 CD164Q04900 197 aa12.39□□□□□ -0.43
SOX17-201ENST00000297316 PRR26Q8N8Z3 221 aa12.36□□□□□ -0.43
SOX17-201ENST00000297316 C1orf64Q8NEQ6 169 aa12.36□□□□□ -0.43
SOX17-201ENST00000297316 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
SOX17-201ENST00000297316 IGHV6-1A0A0B4J1U7 121 aa12.34□□□□□ -0.43
SOX17-201ENST00000297316 A0A1B0GVX0 72 aa12.34□□□□□ -0.43
SOX17-201ENST00000297316 MP68P56378 58 aa12.34□□□□□ -0.43
SOX17-201ENST00000297316 TYMSOSQ8TAI1 123 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 C8orf17Q9NRJ1 99 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 SEC61GP60059 68 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 PRR4Q16378 134 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 NOTCH2NLQ7Z3S9 236 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 V9GYY9 64 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 RYR1P21817 5038 aa12.33□□□□□ -0.44
SOX17-201ENST00000297316 ASB16-AS1Q495Z4 193 aa12.31□□□□□ -0.44
SOX17-201ENST00000297316 LINC00208Q96KT6 92 aa12.31□□□□□ -0.44
SOX17-201ENST00000297316 C1orf195Q5TG92 126 aa12.3□□□□□ -0.44
SOX17-201ENST00000297316 TRAV22A0A0B4J277 110 aa12.29□□□□□ -0.44
SOX17-201ENST00000297316 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
SOX17-201ENST00000297316 KIAA1109Q2LD37 5005 aa12.29□□□□□ -0.44
SOX17-201ENST00000297316 CDK2AP2O75956 126 aa12.29□□□□□ -0.44
SOX17-201ENST00000297316 BRK1Q8WUW1 75 aa12.29□□□□□ -0.44
SOX17-201ENST00000297316 KRTAP17-1Q9BYP8 105 aa12.29□□□□□ -0.44
SOX17-201ENST00000297316 H0Y9P7 68 aa12.26□□□□□ -0.45
SOX17-201ENST00000297316 PKHD1L1Q86WI1 4243 aa12.25□□□□□ -0.45
SOX17-201ENST00000297316 FAM229AH3BQW9 127 aa12.25□□□□□ -0.45
SOX17-201ENST00000297316 Q5VSD8 79 aa12.23□□□□□ -0.45
SOX17-201ENST00000297316 H3BPC8 53 aa12.2□□□□□ -0.46
SOX17-201ENST00000297316 Q1T7F1 81 aa12.19□□□□□ -0.46
SOX17-201ENST00000297316 C4orf48Q5BLP8 95 aa12.19□□□□□ -0.46
SOX17-201ENST00000297316 LRP1Q07954 4544 aaKnown RBP12.19□□□□□ -0.46
SOX17-201ENST00000297316 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
SOX17-201ENST00000297316 MRPL34Q9BQ48 92 aaKnown RBP12.17□□□□□ -0.46
SOX17-201ENST00000297316 SPANXA2-OT1Q8N9U9 137 aa12.14□□□□□ -0.47
SOX17-201ENST00000297316 SPINK1P00995 79 aa12.14□□□□□ -0.47
SOX17-201ENST00000297316 NDUFS5O43920 106 aa12.13□□□□□ -0.47
SOX17-201ENST00000297316 LIMD2Q9BT23 127 aa12.12□□□□□ -0.47
SOX17-201ENST00000297316 TP53AIP1Q9HCN2 124 aa12.09□□□□□ -0.47
SOX17-201ENST00000297316 FLG2Q5D862 2391 aaPredicted RBP12.08□□□□□ -0.48
SOX17-201ENST00000297316 PSPHP1O15172 72 aa12.08□□□□□ -0.48
SOX17-201ENST00000297316 C8orf87E5RJ46 101 aa12.06□□□□□ -0.48
SOX17-201ENST00000297316 TNXBP22105 4242 aa12.05□□□□□ -0.48
SOX17-201ENST00000297316 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
SOX17-201ENST00000297316 LINC00313P59037 77 aa12.03□□□□□ -0.48
SOX17-201ENST00000297316 FAT3Q8TDW7 4589 aa12.01□□□□□ -0.49
SOX17-201ENST00000297316 Q5W150 140 aa12□□□□□ -0.49
SOX17-201ENST00000297316 Q8N1X5 172 aa12□□□□□ -0.49
SOX17-201ENST00000297316 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
SOX17-201ENST00000297316 RPS29P62273 56 aaKnown RBP11.98□□□□□ -0.49
SOX17-201ENST00000297316 KRTAP16-1A8MUX0 517 aa11.98□□□□□ -0.49
SOX17-201ENST00000297316 IGLV7-46A0A075B6I9 117 aa11.97□□□□□ -0.49
SOX17-201ENST00000297316 A8MUN3 132 aa11.97□□□□□ -0.49
SOX17-201ENST00000297316 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
SOX17-201ENST00000297316 PMAIP1Q13794 54 aa11.96□□□□□ -0.49
SOX17-201ENST00000297316 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.49
SOX17-201ENST00000297316 KRTAP10-8P60410 259 aa11.94□□□□□ -0.5
SOX17-201ENST00000297316 RETNLBQ9BQ08 111 aa11.94□□□□□ -0.5
SOX17-201ENST00000297316 Q8N9P0 234 aaPredicted RBP11.93□□□□□ -0.5
SOX17-201ENST00000297316 COA5Q86WW8 74 aa11.92□□□□□ -0.5
SOX17-201ENST00000297316 Q5VV11 94 aa11.89□□□□□ -0.51
SOX17-201ENST00000297316 KRTAP4-5Q9BYR2 181 aa11.88□□□□□ -0.51
SOX17-201ENST00000297316 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
SOX17-201ENST00000297316 PRR15LQ9BU68 103 aa11.82□□□□□ -0.52
SOX17-201ENST00000297316 MT1HL1P0DM35 61 aa11.8□□□□□ -0.52
SOX17-201ENST00000297316 LOC101927531A0A1B0GV80 90 aa11.79□□□□□ -0.52
SOX17-201ENST00000297316 C9orf92A6NGG3 77 aa11.78□□□□□ -0.52
SOX17-201ENST00000297316 CHKB-CPT1BH3BT56 60 aa11.78□□□□□ -0.52
SOX17-201ENST00000297316 A8MU10 97 aa11.76□□□□□ -0.53
SOX17-201ENST00000297316 HRES1P13985 223 aa11.72□□□□□ -0.53
SOX17-201ENST00000297316 Q75L30 129 aa11.7□□□□□ -0.54
SOX17-201ENST00000297316 BIRC6Q9NR09 4857 aa11.69□□□□□ -0.54
SOX17-201ENST00000297316 ABCA13Q86UQ4 5058 aa11.68□□□□□ -0.54
SOX17-201ENST00000297316 IGKV2-30P06310 120 aa11.68□□□□□ -0.54
SOX17-201ENST00000297316 LINC01558Q9Y6Z2 57 aa11.65□□□□□ -0.54
SOX17-201ENST00000297316 A6NED7 52 aa11.63□□□□□ -0.55
SOX17-201ENST00000297316 IGKV2D-30A0A075B6S6 120 aa11.6□□□□□ -0.55
SOX17-201ENST00000297316 LCA10Q71F78 164 aa11.6□□□□□ -0.55
SOX17-201ENST00000297316 HERC2O95714 4834 aa11.59□□□□□ -0.55
SOX17-201ENST00000297316 C20orf166-AS1Q96NR2 134 aa11.57□□□□□ -0.56
SOX17-201ENST00000297316 A8MUU9 505 aa11.56□□□□□ -0.56
SOX17-201ENST00000297316 KTN1-AS1Q86SY8 53 aa11.52□□□□□ -0.57
SOX17-201ENST00000297316 SPTSSBQ8NFR3 76 aa11.52□□□□□ -0.57
SOX17-201ENST00000297316 ACYP2P14621 99 aa11.51□□□□□ -0.57
SOX17-201ENST00000297316 CDC42SE1Q9NRR8 79 aa11.49□□□□□ -0.57
SOX17-201ENST00000297316 ATP11AUNQ6ZP68 121 aa11.48□□□□□ -0.57
SOX17-201ENST00000297316 RBM12B-AS1Q9P1G2 102 aa11.47□□□□□ -0.57
SOX17-201ENST00000297316 SPINK7P58062 85 aa11.46□□□□□ -0.57
SOX17-201ENST00000297316 DMAC1Q96GE9 116 aa11.46□□□□□ -0.57
SOX17-201ENST00000297316 C7orf65Q6ZTY9 151 aa11.43□□□□□ -0.58
SOX17-201ENST00000297316 XP32Q5T750 250 aa11.38□□□□□ -0.59
SOX17-201ENST00000297316 LPAP08519 4548 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms