RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 SERP2Q8N6R1 65 aa6.18□□□□□ -1.42
RFC4-201ENST00000296273 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
RFC4-201ENST00000296273 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
RFC4-201ENST00000296273 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
RFC4-201ENST00000296273 A0A087WVE0 104 aa6.14□□□□□ -1.43
RFC4-201ENST00000296273 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
RFC4-201ENST00000296273 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
RFC4-201ENST00000296273 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
RFC4-201ENST00000296273 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
RFC4-201ENST00000296273 FAT4Q6V0I7 4981 aa6.12□□□□□ -1.43
RFC4-201ENST00000296273 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
RFC4-201ENST00000296273 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
RFC4-201ENST00000296273 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
RFC4-201ENST00000296273 J3KT08 172 aa6.1□□□□□ -1.43
RFC4-201ENST00000296273 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
RFC4-201ENST00000296273 MUC17Q685J3 4493 aa6.1□□□□□ -1.43
RFC4-201ENST00000296273 IGKV4-1P06312 121 aa6.09□□□□□ -1.43
RFC4-201ENST00000296273 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
RFC4-201ENST00000296273 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.43
RFC4-201ENST00000296273 A0A087WSZ3 146 aa6.06□□□□□ -1.44
RFC4-201ENST00000296273 DSCR10P59022 87 aa6.05□□□□□ -1.44
RFC4-201ENST00000296273 CD164Q04900 197 aa6.05□□□□□ -1.44
RFC4-201ENST00000296273 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
RFC4-201ENST00000296273 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
RFC4-201ENST00000296273 NDUFC1O43677 76 aa6.04□□□□□ -1.44
RFC4-201ENST00000296273 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
RFC4-201ENST00000296273 LINC00472Q9H8W2 130 aa6.03□□□□□ -1.44
RFC4-201ENST00000296273 IGLV9-49A0A0B4J1Y8 123 aa6.02□□□□□ -1.45
RFC4-201ENST00000296273 NDUFB1O75438 58 aa6.02□□□□□ -1.45
RFC4-201ENST00000296273 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
RFC4-201ENST00000296273 A8MWP4 228 aa6.01□□□□□ -1.45
RFC4-201ENST00000296273 HCG22E2RYF7 251 aa6.01□□□□□ -1.45
RFC4-201ENST00000296273 TMEM258P61165 79 aa6.01□□□□□ -1.45
RFC4-201ENST00000296273 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
RFC4-201ENST00000296273 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
RFC4-201ENST00000296273 PRR15Q8IV56 129 aa6□□□□□ -1.45
RFC4-201ENST00000296273 Q8N9L7 120 aa6□□□□□ -1.45
RFC4-201ENST00000296273 OCR1Q9BZK8 76 aa6□□□□□ -1.45
RFC4-201ENST00000296273 K7EQZ3 153 aa5.99□□□□□ -1.45
RFC4-201ENST00000296273 MOBPQ13875 183 aa5.99□□□□□ -1.45
RFC4-201ENST00000296273 A0A0G2JQZ4 141 aa5.97□□□□□ -1.45
RFC4-201ENST00000296273 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
RFC4-201ENST00000296273 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
RFC4-201ENST00000296273 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
RFC4-201ENST00000296273 C20orf197Q8N268 126 aa5.97□□□□□ -1.45
RFC4-201ENST00000296273 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.45
RFC4-201ENST00000296273 Q5XG85 94 aa5.95□□□□□ -1.46
RFC4-201ENST00000296273 SPINK1P00995 79 aa5.94□□□□□ -1.46
RFC4-201ENST00000296273 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
RFC4-201ENST00000296273 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
RFC4-201ENST00000296273 H3BPC8 53 aa5.93□□□□□ -1.46
RFC4-201ENST00000296273 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
RFC4-201ENST00000296273 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
RFC4-201ENST00000296273 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
RFC4-201ENST00000296273 Q96NJ1 140 aa5.92□□□□□ -1.46
RFC4-201ENST00000296273 TP53AIP1Q9HCN2 124 aa5.92□□□□□ -1.46
RFC4-201ENST00000296273 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
RFC4-201ENST00000296273 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
RFC4-201ENST00000296273 A0A1B0GVX0 72 aa5.9□□□□□ -1.47
RFC4-201ENST00000296273 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.47
RFC4-201ENST00000296273 H7BZZ5 65 aa5.9□□□□□ -1.47
RFC4-201ENST00000296273 MP68P56378 58 aa5.9□□□□□ -1.47
RFC4-201ENST00000296273 LIMD2Q9BT23 127 aa5.9□□□□□ -1.47
RFC4-201ENST00000296273 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
RFC4-201ENST00000296273 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
RFC4-201ENST00000296273 HRCT1Q6UXD1 115 aa5.88□□□□□ -1.47
RFC4-201ENST00000296273 WFDC13Q8IUB5 93 aa5.88□□□□□ -1.47
RFC4-201ENST00000296273 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
RFC4-201ENST00000296273 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
RFC4-201ENST00000296273 FAM236DA0A1B0GTK5 79 aa5.86□□□□□ -1.47
RFC4-201ENST00000296273 FAM236CP0DP71 79 aa5.86□□□□□ -1.47
RFC4-201ENST00000296273 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
RFC4-201ENST00000296273 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
RFC4-201ENST00000296273 SNURFQ9Y675 71 aa5.85□□□□□ -1.47
RFC4-201ENST00000296273 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
RFC4-201ENST00000296273 SEC61GP60059 68 aa5.82□□□□□ -1.48
RFC4-201ENST00000296273 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
RFC4-201ENST00000296273 SERP1Q9Y6X1 66 aa5.82□□□□□ -1.48
RFC4-201ENST00000296273 IGHV6-1A0A0B4J1U7 121 aa5.81□□□□□ -1.48
RFC4-201ENST00000296273 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
RFC4-201ENST00000296273 H0Y9P7 68 aa5.8□□□□□ -1.48
RFC4-201ENST00000296273 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
RFC4-201ENST00000296273 MT1HP80294 61 aa5.79□□□□□ -1.48
RFC4-201ENST00000296273 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
RFC4-201ENST00000296273 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RFC4-201ENST00000296273 C1orf195Q5TG92 126 aa5.78□□□□□ -1.48
RFC4-201ENST00000296273 SPANXA2-OT1Q8N9U9 137 aa5.78□□□□□ -1.48
RFC4-201ENST00000296273 LINC00313P59037 77 aa5.77□□□□□ -1.49
RFC4-201ENST00000296273 LINC00208Q96KT6 92 aa5.77□□□□□ -1.49
RFC4-201ENST00000296273 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
RFC4-201ENST00000296273 NDUFS5O43920 106 aa5.74□□□□□ -1.49
RFC4-201ENST00000296273 PCOTHQ58A44 107 aa5.74□□□□□ -1.49
RFC4-201ENST00000296273 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
RFC4-201ENST00000296273 CYP4F30PQ9H0H9 118 aa5.74□□□□□ -1.49
RFC4-201ENST00000296273 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
RFC4-201ENST00000296273 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
RFC4-201ENST00000296273 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
RFC4-201ENST00000296273 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
RFC4-201ENST00000296273 C9orf92A6NGG3 77 aa5.68□□□□□ -1.5
RFC4-201ENST00000296273 M0R2T5 61 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms