RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 ZNF861PO60384 105 aa11.65□□□□□ -0.54
NKX6-1-201ENST00000295886 ZNF706Q9Y5V0 76 aaPredicted RBP11.65□□□□□ -0.54
NKX6-1-201ENST00000295886 SPTSSBQ8NFR3 76 aa11.64□□□□□ -0.55
NKX6-1-201ENST00000295886 A0A1B0GVX0 72 aa11.63□□□□□ -0.55
NKX6-1-201ENST00000295886 ASB16-AS1Q495Z4 193 aa11.63□□□□□ -0.55
NKX6-1-201ENST00000295886 PLAC8Q9NZF1 115 aa11.63□□□□□ -0.55
NKX6-1-201ENST00000295886 SPINK6Q6UWN8 80 aa11.63□□□□□ -0.55
NKX6-1-201ENST00000295886 Q6ZR54 194 aa11.62□□□□□ -0.55
NKX6-1-201ENST00000295886 IGLV7-46A0A075B6I9 117 aa11.61□□□□□ -0.55
NKX6-1-201ENST00000295886 CDK2AP2O75956 126 aa11.61□□□□□ -0.55
NKX6-1-201ENST00000295886 CD164Q04900 197 aa11.61□□□□□ -0.55
NKX6-1-201ENST00000295886 A6NED7 52 aa11.6□□□□□ -0.55
NKX6-1-201ENST00000295886 DNAH6Q9C0G6 4158 aa11.6□□□□□ -0.55
NKX6-1-201ENST00000295886 LCA10Q71F78 164 aa11.59□□□□□ -0.55
NKX6-1-201ENST00000295886 Q75L30 129 aa11.59□□□□□ -0.55
NKX6-1-201ENST00000295886 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
NKX6-1-201ENST00000295886 TP53AIP1Q9HCN2 124 aa11.56□□□□□ -0.56
NKX6-1-201ENST00000295886 LOC101927531A0A1B0GV80 90 aa11.56□□□□□ -0.56
NKX6-1-201ENST00000295886 MRPL34Q9BQ48 92 aaKnown RBP11.55□□□□□ -0.56
NKX6-1-201ENST00000295886 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
NKX6-1-201ENST00000295886 DNHD1Q96M86 4753 aa11.52□□□□□ -0.56
NKX6-1-201ENST00000295886 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
NKX6-1-201ENST00000295886 SPAG11AQ6PDA7 123 aa11.52□□□□□ -0.57
NKX6-1-201ENST00000295886 ATP11AUNQ6ZP68 121 aa11.52□□□□□ -0.57
NKX6-1-201ENST00000295886 LY6G6CO95867 125 aa11.51□□□□□ -0.57
NKX6-1-201ENST00000295886 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
NKX6-1-201ENST00000295886 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
NKX6-1-201ENST00000295886 DNAH11Q96DT5 4516 aa11.49□□□□□ -0.57
NKX6-1-201ENST00000295886 Q5W150 140 aa11.46□□□□□ -0.57
NKX6-1-201ENST00000295886 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
NKX6-1-201ENST00000295886 CDC42SE1Q9NRR8 79 aa11.45□□□□□ -0.58
NKX6-1-201ENST00000295886 LINC01558Q9Y6Z2 57 aa11.45□□□□□ -0.58
NKX6-1-201ENST00000295886 DNAH5Q8TE73 4624 aa11.44□□□□□ -0.58
NKX6-1-201ENST00000295886 A6NN06 94 aa11.41□□□□□ -0.58
NKX6-1-201ENST00000295886 HRES1P13985 223 aa11.4□□□□□ -0.58
NKX6-1-201ENST00000295886 RBM12B-AS1Q9P1G2 102 aa11.38□□□□□ -0.59
NKX6-1-201ENST00000295886 LRP1BQ9NZR2 4599 aa11.36□□□□□ -0.59
NKX6-1-201ENST00000295886 SPINK7P58062 85 aa11.36□□□□□ -0.59
NKX6-1-201ENST00000295886 RETNLBQ9BQ08 111 aa11.36□□□□□ -0.59
NKX6-1-201ENST00000295886 KRTAP13-3Q3SY46 172 aa11.32□□□□□ -0.6
NKX6-1-201ENST00000295886 KRTAP13-2Q52LG2 175 aa11.3□□□□□ -0.6
NKX6-1-201ENST00000295886 SSBP3-AS1Q7Z2R9 100 aa11.3□□□□□ -0.6
NKX6-1-201ENST00000295886 HYDINQ4G0P3 5121 aa11.29□□□□□ -0.6
NKX6-1-201ENST00000295886 KRTAP10-1P60331 282 aa11.27□□□□□ -0.6
NKX6-1-201ENST00000295886 PRR26Q8N8Z3 221 aa11.27□□□□□ -0.6
NKX6-1-201ENST00000295886 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
NKX6-1-201ENST00000295886 PKD1P98161 4303 aa11.25□□□□□ -0.61
NKX6-1-201ENST00000295886 LINC00313P59037 77 aa11.25□□□□□ -0.61
NKX6-1-201ENST00000295886 C8orf87E5RJ46 101 aa11.21□□□□□ -0.61
NKX6-1-201ENST00000295886 VPS13BQ7Z7G8 4022 aa11.2□□□□□ -0.62
NKX6-1-201ENST00000295886 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
NKX6-1-201ENST00000295886 Q6ZSA8 131 aa11.16□□□□□ -0.62
NKX6-1-201ENST00000295886 KRTAP1-4P0C5Y4 121 aa11.14□□□□□ -0.63
NKX6-1-201ENST00000295886 ACYP2P14621 99 aa11.13□□□□□ -0.63
NKX6-1-201ENST00000295886 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
NKX6-1-201ENST00000295886 KRTAP16-1A8MUX0 517 aa11.09□□□□□ -0.63
NKX6-1-201ENST00000295886 IGKV2-30P06310 120 aa11.07□□□□□ -0.64
NKX6-1-201ENST00000295886 DMAC1Q96GE9 116 aa11.06□□□□□ -0.64
NKX6-1-201ENST00000295886 IGKV2D-30A0A075B6S6 120 aa11.06□□□□□ -0.64
NKX6-1-201ENST00000295886 PLA2G1BP04054 148 aaKnown RBP11.06□□□□□ -0.64
NKX6-1-201ENST00000295886 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
NKX6-1-201ENST00000295886 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
NKX6-1-201ENST00000295886 PRAC1Q96KF2 57 aa11.01□□□□□ -0.65
NKX6-1-201ENST00000295886 A0A1B0GU69 56 aa10.99□□□□□ -0.65
NKX6-1-201ENST00000295886 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
NKX6-1-201ENST00000295886 ADM2Q7Z4H4 148 aa10.95□□□□□ -0.66
NKX6-1-201ENST00000295886 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
NKX6-1-201ENST00000295886 SPINK1P00995 79 aa10.88□□□□□ -0.67
NKX6-1-201ENST00000295886 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
NKX6-1-201ENST00000295886 MIR22HGQ0VDD5 57 aa10.85□□□□□ -0.67
NKX6-1-201ENST00000295886 UQCR11O14957 56 aa10.83□□□□□ -0.68
NKX6-1-201ENST00000295886 LINC00304Q8N9R0 145 aa10.83□□□□□ -0.68
NKX6-1-201ENST00000295886 Q8N1X5 172 aa10.82□□□□□ -0.68
NKX6-1-201ENST00000295886 SACSQ9NZJ4 4579 aa10.82□□□□□ -0.68
NKX6-1-201ENST00000295886 FAT1Q14517 4588 aa10.81□□□□□ -0.68
NKX6-1-201ENST00000295886 DYNC1H1Q14204 4646 aaKnown RBP10.79□□□□□ -0.68
NKX6-1-201ENST00000295886 C9orf92A6NGG3 77 aa10.77□□□□□ -0.69
NKX6-1-201ENST00000295886 LINC01554Q52M75 96 aa10.73□□□□□ -0.69
NKX6-1-201ENST00000295886 APOBP04114 4563 aaKnown RBP10.62□□□□□ -0.71
NKX6-1-201ENST00000295886 CSAG1Q6PB30 78 aa10.62□□□□□ -0.71
NKX6-1-201ENST00000295886 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
NKX6-1-201ENST00000295886 KRTAP10-4P60372 401 aaPredicted RBP10.56□□□□□ -0.72
NKX6-1-201ENST00000295886 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
NKX6-1-201ENST00000295886 A8MUU9 505 aa10.54□□□□□ -0.72
NKX6-1-201ENST00000295886 C20orf166-AS1Q96NR2 134 aa10.54□□□□□ -0.72
NKX6-1-201ENST00000295886 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
NKX6-1-201ENST00000295886 KRTAP3-1Q9BYR8 98 aa10.52□□□□□ -0.73
NKX6-1-201ENST00000295886 KMT2CQ8NEZ4 4911 aaKnown RBP10.43□□□□□ -0.74
NKX6-1-201ENST00000295886 FLG2Q5D862 2391 aaPredicted RBP10.43□□□□□ -0.74
NKX6-1-201ENST00000295886 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
NKX6-1-201ENST00000295886 RYR2Q92736 4967 aa10.4□□□□□ -0.75
NKX6-1-201ENST00000295886 H0YAA0 97 aa10.39□□□□□ -0.75
NKX6-1-201ENST00000295886 H3BS24 57 aa10.31□□□□□ -0.76
NKX6-1-201ENST00000295886 FAT3Q8TDW7 4589 aa10.3□□□□□ -0.76
NKX6-1-201ENST00000295886 A0A1B0GU33 70 aa10.29□□□□□ -0.76
NKX6-1-201ENST00000295886 HSPG2P98160 4391 aa10.27□□□□□ -0.77
NKX6-1-201ENST00000295886 MYCBP2O75592 4640 aa10.26□□□□□ -0.77
NKX6-1-201ENST00000295886 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
NKX6-1-201ENST00000295886 TNXBP22105 4242 aa10.25□□□□□ -0.77
NKX6-1-201ENST00000295886 COX6B2Q6YFQ2 88 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms