RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 DYNC1H1Q14204 4646 aaKnown RBP12.54□□□□□ -0.4
RNF149-201ENST00000295317 ATP5EP56381 51 aaPredicted RBP12.54□□□□□ -0.4
RNF149-201ENST00000295317 TRAV22A0A0B4J277 110 aa12.53□□□□□ -0.4
RNF149-201ENST00000295317 ASB16-AS1Q495Z4 193 aa12.53□□□□□ -0.4
RNF149-201ENST00000295317 FP248Q71RG6 208 aaPredicted RBP12.53□□□□□ -0.4
RNF149-201ENST00000295317 C1orf64Q8NEQ6 169 aa12.53□□□□□ -0.4
RNF149-201ENST00000295317 KRTAP1-4P0C5Y4 121 aa12.52□□□□□ -0.4
RNF149-201ENST00000295317 KMT2CQ8NEZ4 4911 aaKnown RBP12.52□□□□□ -0.4
RNF149-201ENST00000295317 SSBP3-AS1Q7Z2R9 100 aa12.52□□□□□ -0.41
RNF149-201ENST00000295317 FAT1Q14517 4588 aa12.51□□□□□ -0.41
RNF149-201ENST00000295317 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
RNF149-201ENST00000295317 MRPL34Q9BQ48 92 aaKnown RBP12.46□□□□□ -0.42
RNF149-201ENST00000295317 PLA2G1BP04054 148 aaKnown RBP12.44□□□□□ -0.42
RNF149-201ENST00000295317 PCOTHQ58A44 107 aa12.44□□□□□ -0.42
RNF149-201ENST00000295317 CD164Q04900 197 aa12.44□□□□□ -0.42
RNF149-201ENST00000295317 MPLKIPQ8TAP9 179 aa12.44□□□□□ -0.42
RNF149-201ENST00000295317 SMIM26A0A096LP01 95 aa12.43□□□□□ -0.42
RNF149-201ENST00000295317 C1orf195Q5TG92 126 aa12.39□□□□□ -0.43
RNF149-201ENST00000295317 RYR2Q92736 4967 aa12.39□□□□□ -0.43
RNF149-201ENST00000295317 Q5W150 140 aa12.37□□□□□ -0.43
RNF149-201ENST00000295317 TP53AIP1Q9HCN2 124 aa12.37□□□□□ -0.43
RNF149-201ENST00000295317 APOBP04114 4563 aaKnown RBP12.36□□□□□ -0.43
RNF149-201ENST00000295317 H3BPC8 53 aa12.35□□□□□ -0.43
RNF149-201ENST00000295317 RETNLBQ9BQ08 111 aa12.34□□□□□ -0.43
RNF149-201ENST00000295317 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
RNF149-201ENST00000295317 TYMSOSQ8TAI1 123 aa12.33□□□□□ -0.44
RNF149-201ENST00000295317 CYP4F30PQ9H0H9 118 aa12.32□□□□□ -0.44
RNF149-201ENST00000295317 A0A1B0GVY2 172 aa12.31□□□□□ -0.44
RNF149-201ENST00000295317 LINC00313P59037 77 aa12.28□□□□□ -0.44
RNF149-201ENST00000295317 LINC00336Q6ZUF6 198 aa12.27□□□□□ -0.45
RNF149-201ENST00000295317 C4orf48Q5BLP8 95 aa12.24□□□□□ -0.45
RNF149-201ENST00000295317 SPANXA2-OT1Q8N9U9 137 aa12.24□□□□□ -0.45
RNF149-201ENST00000295317 KRTAP13-3Q3SY46 172 aa12.21□□□□□ -0.45
RNF149-201ENST00000295317 C8orf87E5RJ46 101 aa12.2□□□□□ -0.46
RNF149-201ENST00000295317 IGLV7-46A0A075B6I9 117 aa12.18□□□□□ -0.46
RNF149-201ENST00000295317 LIMD2Q9BT23 127 aa12.18□□□□□ -0.46
RNF149-201ENST00000295317 Q8N9P0 234 aaPredicted RBP12.16□□□□□ -0.46
RNF149-201ENST00000295317 KRTAP16-1A8MUX0 517 aa12.15□□□□□ -0.46
RNF149-201ENST00000295317 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
RNF149-201ENST00000295317 LINC00304Q8N9R0 145 aa12.14□□□□□ -0.47
RNF149-201ENST00000295317 SPINK1P00995 79 aa12.13□□□□□ -0.47
RNF149-201ENST00000295317 PSPHP1O15172 72 aa12.12□□□□□ -0.47
RNF149-201ENST00000295317 COA5Q86WW8 74 aa12.12□□□□□ -0.47
RNF149-201ENST00000295317 RYR3Q15413 4870 aa12.12□□□□□ -0.47
RNF149-201ENST00000295317 LOC101927531A0A1B0GV80 90 aa12.08□□□□□ -0.48
RNF149-201ENST00000295317 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
RNF149-201ENST00000295317 PKHD1L1Q86WI1 4243 aa12.04□□□□□ -0.48
RNF149-201ENST00000295317 Q1T7F1 81 aa12.04□□□□□ -0.48
RNF149-201ENST00000295317 FAM229AH3BQW9 127 aa12.02□□□□□ -0.48
RNF149-201ENST00000295317 HRES1P13985 223 aa12.02□□□□□ -0.49
RNF149-201ENST00000295317 A8MUN3 132 aa12□□□□□ -0.49
RNF149-201ENST00000295317 PRO0628Q9UI54 55 aa11.99□□□□□ -0.49
RNF149-201ENST00000295317 BRK1Q8WUW1 75 aa11.99□□□□□ -0.49
RNF149-201ENST00000295317 IGKV2D-30A0A075B6S6 120 aa11.98□□□□□ -0.49
RNF149-201ENST00000295317 IGKV2-30P06310 120 aa11.98□□□□□ -0.49
RNF149-201ENST00000295317 C9orf92A6NGG3 77 aa11.97□□□□□ -0.49
RNF149-201ENST00000295317 HSPG2P98160 4391 aa11.97□□□□□ -0.49
RNF149-201ENST00000295317 FLG2Q5D862 2391 aaPredicted RBP11.96□□□□□ -0.49
RNF149-201ENST00000295317 SPAG11AQ6PDA7 123 aa11.92□□□□□ -0.5
RNF149-201ENST00000295317 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
RNF149-201ENST00000295317 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
RNF149-201ENST00000295317 RPS29P62273 56 aaKnown RBP11.86□□□□□ -0.51
RNF149-201ENST00000295317 KRTAP17-1Q9BYP8 105 aa11.86□□□□□ -0.51
RNF149-201ENST00000295317 Q5VV11 94 aa11.85□□□□□ -0.51
RNF149-201ENST00000295317 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
RNF149-201ENST00000295317 TNXBP22105 4242 aa11.83□□□□□ -0.52
RNF149-201ENST00000295317 A8MU10 97 aa11.81□□□□□ -0.52
RNF149-201ENST00000295317 MYCBP2O75592 4640 aa11.8□□□□□ -0.52
RNF149-201ENST00000295317 Q8N1X5 172 aa11.8□□□□□ -0.52
RNF149-201ENST00000295317 V9GYY9 64 aa11.8□□□□□ -0.52
RNF149-201ENST00000295317 Q5VSD8 79 aa11.79□□□□□ -0.52
RNF149-201ENST00000295317 DMAC1Q96GE9 116 aa11.78□□□□□ -0.52
RNF149-201ENST00000295317 RYR1P21817 5038 aa11.78□□□□□ -0.52
RNF149-201ENST00000295317 ACYP2P14621 99 aa11.77□□□□□ -0.53
RNF149-201ENST00000295317 CHKB-CPT1BH3BT56 60 aa11.75□□□□□ -0.53
RNF149-201ENST00000295317 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
RNF149-201ENST00000295317 EPPK1P58107 5090 aaKnown RBP11.71□□□□□ -0.54
RNF149-201ENST00000295317 C7orf65Q6ZTY9 151 aa11.68□□□□□ -0.54
RNF149-201ENST00000295317 LINC01558Q9Y6Z2 57 aa11.67□□□□□ -0.54
RNF149-201ENST00000295317 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
RNF149-201ENST00000295317 A8MUU9 505 aa11.64□□□□□ -0.55
RNF149-201ENST00000295317 KRTAP10-8P60410 259 aa11.63□□□□□ -0.55
RNF149-201ENST00000295317 Q75L30 129 aa11.6□□□□□ -0.55
RNF149-201ENST00000295317 A6NED7 52 aa11.59□□□□□ -0.55
RNF149-201ENST00000295317 SPINK7P58062 85 aa11.56□□□□□ -0.56
RNF149-201ENST00000295317 LCA10Q71F78 164 aa11.54□□□□□ -0.56
RNF149-201ENST00000295317 KRTAP3-1Q9BYR8 98 aa11.46□□□□□ -0.58
RNF149-201ENST00000295317 SPTSSBQ8NFR3 76 aa11.43□□□□□ -0.58
RNF149-201ENST00000295317 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
RNF149-201ENST00000295317 A0A1B0GU69 56 aa11.4□□□□□ -0.58
RNF149-201ENST00000295317 KRTAP4-5Q9BYR2 181 aa11.33□□□□□ -0.6
RNF149-201ENST00000295317 CDC42SE1Q9NRR8 79 aa11.33□□□□□ -0.6
RNF149-201ENST00000295317 ATP11AUNQ6ZP68 121 aa11.32□□□□□ -0.6
RNF149-201ENST00000295317 ABCA13Q86UQ4 5058 aa11.32□□□□□ -0.6
RNF149-201ENST00000295317 XP32Q5T750 250 aa11.32□□□□□ -0.6
RNF149-201ENST00000295317 LPAP08519 4548 aa11.32□□□□□ -0.6
RNF149-201ENST00000295317 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
RNF149-201ENST00000295317 LRP2P98164 4655 aa11.27□□□□□ -0.6
RNF149-201ENST00000295317 RPL37P61927 97 aaKnown RBP11.25□□□□□ -0.61
RNF149-201ENST00000295317 SEC61GP60059 68 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms