RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 A0A087X002 238 aa8.23□□□□□ -1.09
NXF1-201ENST00000294172 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
NXF1-201ENST00000294172 PRR4Q16378 134 aa8.23□□□□□ -1.09
NXF1-201ENST00000294172 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
NXF1-201ENST00000294172 MPLKIPQ8TAP9 179 aa8.23□□□□□ -1.09
NXF1-201ENST00000294172 C8orf17Q9NRJ1 99 aa8.23□□□□□ -1.09
NXF1-201ENST00000294172 H0Y9P7 68 aa8.21□□□□□ -1.09
NXF1-201ENST00000294172 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
NXF1-201ENST00000294172 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
NXF1-201ENST00000294172 CD164Q04900 197 aa8.19□□□□□ -1.1
NXF1-201ENST00000294172 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
NXF1-201ENST00000294172 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
NXF1-201ENST00000294172 NDUFS5O43920 106 aa8.17□□□□□ -1.1
NXF1-201ENST00000294172 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
NXF1-201ENST00000294172 CYP4F30PQ9H0H9 118 aa8.15□□□□□ -1.1
NXF1-201ENST00000294172 H3BPC8 53 aa8.14□□□□□ -1.11
NXF1-201ENST00000294172 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
NXF1-201ENST00000294172 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
NXF1-201ENST00000294172 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
NXF1-201ENST00000294172 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
NXF1-201ENST00000294172 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
NXF1-201ENST00000294172 C1orf195Q5TG92 126 aa8.12□□□□□ -1.11
NXF1-201ENST00000294172 SMR3BP02814 79 aaPredicted RBP8.09□□□□□ -1.11
NXF1-201ENST00000294172 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
NXF1-201ENST00000294172 RYR2Q92736 4967 aa8.07□□□□□ -1.12
NXF1-201ENST00000294172 KMT2CQ8NEZ4 4911 aaKnown RBP8.06□□□□□ -1.12
NXF1-201ENST00000294172 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
NXF1-201ENST00000294172 FAT1Q14517 4588 aa8.05□□□□□ -1.12
NXF1-201ENST00000294172 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
NXF1-201ENST00000294172 Q1T7F1 81 aa8.04□□□□□ -1.12
NXF1-201ENST00000294172 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
NXF1-201ENST00000294172 PCOTHQ58A44 107 aa8.04□□□□□ -1.12
NXF1-201ENST00000294172 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
NXF1-201ENST00000294172 LINC00313P59037 77 aa8.03□□□□□ -1.12
NXF1-201ENST00000294172 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
NXF1-201ENST00000294172 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
NXF1-201ENST00000294172 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
NXF1-201ENST00000294172 PSPHP1O15172 72 aa8□□□□□ -1.13
NXF1-201ENST00000294172 Q5W150 140 aa7.99□□□□□ -1.13
NXF1-201ENST00000294172 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
NXF1-201ENST00000294172 SPINK1P00995 79 aa7.97□□□□□ -1.13
NXF1-201ENST00000294172 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
NXF1-201ENST00000294172 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
NXF1-201ENST00000294172 H3BS24 57 aa7.94□□□□□ -1.14
NXF1-201ENST00000294172 COA5Q86WW8 74 aa7.94□□□□□ -1.14
NXF1-201ENST00000294172 A8MUN3 132 aa7.92□□□□□ -1.14
NXF1-201ENST00000294172 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
NXF1-201ENST00000294172 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
NXF1-201ENST00000294172 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
NXF1-201ENST00000294172 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.15
NXF1-201ENST00000294172 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
NXF1-201ENST00000294172 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
NXF1-201ENST00000294172 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
NXF1-201ENST00000294172 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
NXF1-201ENST00000294172 Q5VV11 94 aa7.85□□□□□ -1.15
NXF1-201ENST00000294172 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
NXF1-201ENST00000294172 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.15
NXF1-201ENST00000294172 RYR3Q15413 4870 aa7.83□□□□□ -1.16
NXF1-201ENST00000294172 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
NXF1-201ENST00000294172 HRES1P13985 223 aa7.82□□□□□ -1.16
NXF1-201ENST00000294172 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
NXF1-201ENST00000294172 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
NXF1-201ENST00000294172 IGKV2D-30A0A075B6S6 120 aa7.77□□□□□ -1.17
NXF1-201ENST00000294172 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
NXF1-201ENST00000294172 HSPG2P98160 4391 aa7.74□□□□□ -1.17
NXF1-201ENST00000294172 A8MU10 97 aa7.74□□□□□ -1.17
NXF1-201ENST00000294172 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
NXF1-201ENST00000294172 Q75L30 129 aa7.73□□□□□ -1.17
NXF1-201ENST00000294172 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
NXF1-201ENST00000294172 A6NED7 52 aa7.7□□□□□ -1.18
NXF1-201ENST00000294172 ACYP2P14621 99 aa7.7□□□□□ -1.18
NXF1-201ENST00000294172 Q5VSD8 79 aa7.7□□□□□ -1.18
NXF1-201ENST00000294172 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
NXF1-201ENST00000294172 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
NXF1-201ENST00000294172 RYR1P21817 5038 aa7.68□□□□□ -1.18
NXF1-201ENST00000294172 Q8N1X5 172 aa7.66□□□□□ -1.18
NXF1-201ENST00000294172 TNXBP22105 4242 aa7.65□□□□□ -1.18
NXF1-201ENST00000294172 LCA10Q71F78 164 aa7.65□□□□□ -1.18
NXF1-201ENST00000294172 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
NXF1-201ENST00000294172 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
NXF1-201ENST00000294172 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
NXF1-201ENST00000294172 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
NXF1-201ENST00000294172 A8MUU9 505 aa7.61□□□□□ -1.19
NXF1-201ENST00000294172 SPTSSBQ8NFR3 76 aa7.61□□□□□ -1.19
NXF1-201ENST00000294172 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
NXF1-201ENST00000294172 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
NXF1-201ENST00000294172 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
NXF1-201ENST00000294172 SPINK7P58062 85 aa7.59□□□□□ -1.19
NXF1-201ENST00000294172 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
NXF1-201ENST00000294172 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
NXF1-201ENST00000294172 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
NXF1-201ENST00000294172 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
NXF1-201ENST00000294172 EPPK1P58107 5090 aaKnown RBP7.54□□□□□ -1.2
NXF1-201ENST00000294172 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
NXF1-201ENST00000294172 A0A1B0GU69 56 aa7.49□□□□□ -1.21
NXF1-201ENST00000294172 A6NN06 94 aa7.44□□□□□ -1.22
NXF1-201ENST00000294172 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
NXF1-201ENST00000294172 MT1HL1P0DM35 61 aa7.42□□□□□ -1.22
NXF1-201ENST00000294172 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.23
NXF1-201ENST00000294172 XP32Q5T750 250 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms