RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 SYNE2Q8WXH0 6885 aaKnown RBP8.76□□□□□ -1.01
UBXN1-201ENST00000294119 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
UBXN1-201ENST00000294119 RPS29P62273 56 aaKnown RBP8.74□□□□□ -1.01
UBXN1-201ENST00000294119 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
UBXN1-201ENST00000294119 A0A1W2PNM2 257 aa8.72□□□□□ -1.01
UBXN1-201ENST00000294119 TRBV7-7A0A0K0K1E9 115 aa8.71□□□□□ -1.02
UBXN1-201ENST00000294119 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
UBXN1-201ENST00000294119 Q5XG85 94 aa8.7□□□□□ -1.02
UBXN1-201ENST00000294119 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
UBXN1-201ENST00000294119 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
UBXN1-201ENST00000294119 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
UBXN1-201ENST00000294119 J3QR89 54 aa8.68□□□□□ -1.02
UBXN1-201ENST00000294119 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
UBXN1-201ENST00000294119 ACYP1P07311 99 aa8.66□□□□□ -1.02
UBXN1-201ENST00000294119 A0A087WSZ3 146 aa8.65□□□□□ -1.02
UBXN1-201ENST00000294119 FAM240AA0A1B0GVK7 77 aa8.64□□□□□ -1.03
UBXN1-201ENST00000294119 XP32Q5T750 250 aa8.61□□□□□ -1.03
UBXN1-201ENST00000294119 NREPQ16612 68 aa8.6□□□□□ -1.03
UBXN1-201ENST00000294119 K7ERU9 68 aa8.59□□□□□ -1.03
UBXN1-201ENST00000294119 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
UBXN1-201ENST00000294119 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
UBXN1-201ENST00000294119 J3KT08 172 aa8.55□□□□□ -1.04
UBXN1-201ENST00000294119 C1orf195Q5TG92 126 aa8.53□□□□□ -1.04
UBXN1-201ENST00000294119 LINC00472Q9H8W2 130 aa8.53□□□□□ -1.04
UBXN1-201ENST00000294119 M0R2T5 61 aa8.52□□□□□ -1.05
UBXN1-201ENST00000294119 Q6ZVQ6 151 aa8.52□□□□□ -1.05
UBXN1-201ENST00000294119 Q96NJ1 140 aa8.5□□□□□ -1.05
UBXN1-201ENST00000294119 BPY2O14599 106 aa8.48□□□□□ -1.05
UBXN1-201ENST00000294119 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
UBXN1-201ENST00000294119 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
UBXN1-201ENST00000294119 NDUFB1O75438 58 aa8.45□□□□□ -1.06
UBXN1-201ENST00000294119 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
UBXN1-201ENST00000294119 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
UBXN1-201ENST00000294119 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
UBXN1-201ENST00000294119 CXCL6P80162 114 aa8.44□□□□□ -1.06
UBXN1-201ENST00000294119 DEFB116Q30KQ4 102 aa8.43□□□□□ -1.06
UBXN1-201ENST00000294119 A8MWP4 228 aa8.41□□□□□ -1.06
UBXN1-201ENST00000294119 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
UBXN1-201ENST00000294119 A0A1B0GVX0 72 aa8.38□□□□□ -1.07
UBXN1-201ENST00000294119 DSCR10P59022 87 aa8.38□□□□□ -1.07
UBXN1-201ENST00000294119 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
UBXN1-201ENST00000294119 PRR15Q8IV56 129 aa8.37□□□□□ -1.07
UBXN1-201ENST00000294119 NEBP20929 6669 aa8.36□□□□□ -1.07
UBXN1-201ENST00000294119 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
UBXN1-201ENST00000294119 KRTAP9-8Q9BYQ0 159 aa8.34□□□□□ -1.07
UBXN1-201ENST00000294119 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
UBXN1-201ENST00000294119 LINC00313P59037 77 aa8.33□□□□□ -1.08
UBXN1-201ENST00000294119 K7EQZ3 153 aa8.32□□□□□ -1.08
UBXN1-201ENST00000294119 IMUPQ9GZP8 106 aa8.29□□□□□ -1.08
UBXN1-201ENST00000294119 C8orf17Q9NRJ1 99 aa8.29□□□□□ -1.08
UBXN1-201ENST00000294119 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
UBXN1-201ENST00000294119 COX6B2Q6YFQ2 88 aa8.28□□□□□ -1.08
UBXN1-201ENST00000294119 Q8N9L7 120 aa8.27□□□□□ -1.09
UBXN1-201ENST00000294119 C9orf92A6NGG3 77 aa8.26□□□□□ -1.09
UBXN1-201ENST00000294119 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
UBXN1-201ENST00000294119 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
UBXN1-201ENST00000294119 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
UBXN1-201ENST00000294119 HCG22E2RYF7 251 aa8.23□□□□□ -1.09
UBXN1-201ENST00000294119 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
UBXN1-201ENST00000294119 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
UBXN1-201ENST00000294119 CASC2Q6XLA1 102 aa8.22□□□□□ -1.09
UBXN1-201ENST00000294119 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
UBXN1-201ENST00000294119 KRTAP16-1A8MUX0 517 aa8.19□□□□□ -1.1
UBXN1-201ENST00000294119 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
UBXN1-201ENST00000294119 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
UBXN1-201ENST00000294119 Q75L30 129 aa8.17□□□□□ -1.1
UBXN1-201ENST00000294119 WFDC13Q8IUB5 93 aa8.17□□□□□ -1.1
UBXN1-201ENST00000294119 A8MUU9 505 aa8.16□□□□□ -1.1
UBXN1-201ENST00000294119 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
UBXN1-201ENST00000294119 MUC12Q9UKN1 5478 aa8.16□□□□□ -1.1
UBXN1-201ENST00000294119 RPL37P61927 97 aaKnown RBP8.15□□□□□ -1.1
UBXN1-201ENST00000294119 A0A087WVE0 104 aa8.14□□□□□ -1.11
UBXN1-201ENST00000294119 KRTAP19-6Q3LI70 58 aa8.12□□□□□ -1.11
UBXN1-201ENST00000294119 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
UBXN1-201ENST00000294119 NDUFS5O43920 106 aa8.1□□□□□ -1.11
UBXN1-201ENST00000294119 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
UBXN1-201ENST00000294119 MT2AP02795 61 aa8.09□□□□□ -1.11
UBXN1-201ENST00000294119 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
UBXN1-201ENST00000294119 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
UBXN1-201ENST00000294119 SMIM20Q8N5G0 67 aa8.05□□□□□ -1.12
UBXN1-201ENST00000294119 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
UBXN1-201ENST00000294119 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
UBXN1-201ENST00000294119 MT1FP04733 61 aa8.03□□□□□ -1.12
UBXN1-201ENST00000294119 KRTAP20-1Q3LI63 56 aa8.03□□□□□ -1.12
UBXN1-201ENST00000294119 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
UBXN1-201ENST00000294119 UQCRQO14949 82 aa8.02□□□□□ -1.13
UBXN1-201ENST00000294119 ATOX1O00244 68 aa8.01□□□□□ -1.13
UBXN1-201ENST00000294119 OCR1Q9BZK8 76 aa7.98□□□□□ -1.13
UBXN1-201ENST00000294119 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
UBXN1-201ENST00000294119 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
UBXN1-201ENST00000294119 C5orf47Q569G3 176 aa7.94□□□□□ -1.14
UBXN1-201ENST00000294119 Q5W150 140 aa7.92□□□□□ -1.14
UBXN1-201ENST00000294119 MP68P56378 58 aa7.91□□□□□ -1.14
UBXN1-201ENST00000294119 H3BPC8 53 aa7.9□□□□□ -1.14
UBXN1-201ENST00000294119 H0Y9P7 68 aa7.89□□□□□ -1.15
UBXN1-201ENST00000294119 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
UBXN1-201ENST00000294119 LOC101927531A0A1B0GV80 90 aa7.86□□□□□ -1.15
UBXN1-201ENST00000294119 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
UBXN1-201ENST00000294119 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
UBXN1-201ENST00000294119 SPINK7P58062 85 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms