RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 PCOTHQ58A44 107 aa12.79□□□□□ -0.36
PAXBP1-201ENST00000290178 SPANXA2-OT1Q8N9U9 137 aa12.79□□□□□ -0.36
PAXBP1-201ENST00000290178 PRO0628Q9UI54 55 aa12.78□□□□□ -0.36
PAXBP1-201ENST00000290178 Q1T7F1 81 aa12.77□□□□□ -0.37
PAXBP1-201ENST00000290178 TP53AIP1Q9HCN2 124 aa12.76□□□□□ -0.37
PAXBP1-201ENST00000290178 PSPHP1O15172 72 aa12.75□□□□□ -0.37
PAXBP1-201ENST00000290178 MRPL34Q9BQ48 92 aaKnown RBP12.75□□□□□ -0.37
PAXBP1-201ENST00000290178 CD164Q04900 197 aa12.72□□□□□ -0.37
PAXBP1-201ENST00000290178 HYDINQ4G0P3 5121 aa12.69□□□□□ -0.38
PAXBP1-201ENST00000290178 IGLV7-46A0A075B6I9 117 aa12.68□□□□□ -0.38
PAXBP1-201ENST00000290178 LRP1BQ9NZR2 4599 aa12.66□□□□□ -0.38
PAXBP1-201ENST00000290178 KRTAP10-1P60331 282 aa12.66□□□□□ -0.38
PAXBP1-201ENST00000290178 PKD1P98161 4303 aa12.64□□□□□ -0.39
PAXBP1-201ENST00000290178 A8MUN3 132 aa12.63□□□□□ -0.39
PAXBP1-201ENST00000290178 Q5W150 140 aa12.62□□□□□ -0.39
PAXBP1-201ENST00000290178 SSBP3-AS1Q7Z2R9 100 aa12.62□□□□□ -0.39
PAXBP1-201ENST00000290178 COA5Q86WW8 74 aa12.62□□□□□ -0.39
PAXBP1-201ENST00000290178 KRTAP13-2Q52LG2 175 aa12.6□□□□□ -0.39
PAXBP1-201ENST00000290178 FAT2Q9NYQ8 4349 aa12.59□□□□□ -0.39
PAXBP1-201ENST00000290178 Q8N9P0 234 aaPredicted RBP12.58□□□□□ -0.4
PAXBP1-201ENST00000290178 Q6ZSA8 131 aa12.56□□□□□ -0.4
PAXBP1-201ENST00000290178 V9GYY9 64 aa12.52□□□□□ -0.4
PAXBP1-201ENST00000290178 KRTAP13-3Q3SY46 172 aa12.51□□□□□ -0.41
PAXBP1-201ENST00000290178 Q5VV11 94 aa12.51□□□□□ -0.41
PAXBP1-201ENST00000290178 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
PAXBP1-201ENST00000290178 RETNLBQ9BQ08 111 aa12.48□□□□□ -0.41
PAXBP1-201ENST00000290178 VPS13BQ7Z7G8 4022 aa12.48□□□□□ -0.41
PAXBP1-201ENST00000290178 PRR15LQ9BU68 103 aa12.47□□□□□ -0.41
PAXBP1-201ENST00000290178 HRES1P13985 223 aa12.46□□□□□ -0.41
PAXBP1-201ENST00000290178 LINC00313P59037 77 aa12.46□□□□□ -0.41
PAXBP1-201ENST00000290178 KRTAP1-4P0C5Y4 121 aa12.45□□□□□ -0.42
PAXBP1-201ENST00000290178 LOC101927531A0A1B0GV80 90 aa12.45□□□□□ -0.42
PAXBP1-201ENST00000290178 A8MU10 97 aa12.44□□□□□ -0.42
PAXBP1-201ENST00000290178 C8orf87E5RJ46 101 aa12.44□□□□□ -0.42
PAXBP1-201ENST00000290178 LIMD2Q9BT23 127 aa12.44□□□□□ -0.42
PAXBP1-201ENST00000290178 SPAG11AQ6PDA7 123 aa12.41□□□□□ -0.42
PAXBP1-201ENST00000290178 CHKB-CPT1BH3BT56 60 aa12.4□□□□□ -0.42
PAXBP1-201ENST00000290178 PLA2G1BP04054 148 aaKnown RBP12.35□□□□□ -0.43
PAXBP1-201ENST00000290178 PKHD1P08F94 4074 aa12.32□□□□□ -0.44
PAXBP1-201ENST00000290178 KRTAP16-1A8MUX0 517 aa12.31□□□□□ -0.44
PAXBP1-201ENST00000290178 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
PAXBP1-201ENST00000290178 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
PAXBP1-201ENST00000290178 TYMSOSQ8TAI1 123 aa12.28□□□□□ -0.44
PAXBP1-201ENST00000290178 LINC01558Q9Y6Z2 57 aa12.27□□□□□ -0.45
PAXBP1-201ENST00000290178 Q75L30 129 aa12.26□□□□□ -0.45
PAXBP1-201ENST00000290178 C4orf48Q5BLP8 95 aa12.25□□□□□ -0.45
PAXBP1-201ENST00000290178 A6NED7 52 aa12.23□□□□□ -0.45
PAXBP1-201ENST00000290178 IGKV2-30P06310 120 aa12.22□□□□□ -0.45
PAXBP1-201ENST00000290178 LCA10Q71F78 164 aa12.21□□□□□ -0.45
PAXBP1-201ENST00000290178 ACYP2P14621 99 aa12.21□□□□□ -0.46
PAXBP1-201ENST00000290178 SACSQ9NZJ4 4579 aa12.21□□□□□ -0.46
PAXBP1-201ENST00000290178 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
PAXBP1-201ENST00000290178 DMAC1Q96GE9 116 aa12.17□□□□□ -0.46
PAXBP1-201ENST00000290178 IGKV2D-30A0A075B6S6 120 aa12.16□□□□□ -0.46
PAXBP1-201ENST00000290178 SPINK1P00995 79 aa12.16□□□□□ -0.46
PAXBP1-201ENST00000290178 KRTAP21-3Q3LHN1 58 aa12.15□□□□□ -0.46
PAXBP1-201ENST00000290178 SPINK7P58062 85 aa12.12□□□□□ -0.47
PAXBP1-201ENST00000290178 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
PAXBP1-201ENST00000290178 SPTSSBQ8NFR3 76 aa12.11□□□□□ -0.47
PAXBP1-201ENST00000290178 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
PAXBP1-201ENST00000290178 PMAIP1Q13794 54 aa12.07□□□□□ -0.48
PAXBP1-201ENST00000290178 FAT1Q14517 4588 aa12.05□□□□□ -0.48
PAXBP1-201ENST00000290178 CDC42SE1Q9NRR8 79 aa12.03□□□□□ -0.48
PAXBP1-201ENST00000290178 ATP11AUNQ6ZP68 121 aa11.97□□□□□ -0.49
PAXBP1-201ENST00000290178 C7orf65Q6ZTY9 151 aa11.96□□□□□ -0.49
PAXBP1-201ENST00000290178 A0A1B0GVY2 172 aa11.95□□□□□ -0.5
PAXBP1-201ENST00000290178 APOBP04114 4563 aaKnown RBP11.94□□□□□ -0.5
PAXBP1-201ENST00000290178 C9orf92A6NGG3 77 aa11.94□□□□□ -0.5
PAXBP1-201ENST00000290178 KRTAP10-4P60372 401 aaPredicted RBP11.92□□□□□ -0.5
PAXBP1-201ENST00000290178 RPS29P62273 56 aaKnown RBP11.92□□□□□ -0.5
PAXBP1-201ENST00000290178 Q8N1X5 172 aa11.89□□□□□ -0.51
PAXBP1-201ENST00000290178 A0A1B0GU69 56 aa11.88□□□□□ -0.51
PAXBP1-201ENST00000290178 PKHD1L1Q86WI1 4243 aa11.84□□□□□ -0.51
PAXBP1-201ENST00000290178 A6NN06 94 aa11.83□□□□□ -0.52
PAXBP1-201ENST00000290178 RYR2Q92736 4967 aa11.79□□□□□ -0.52
PAXBP1-201ENST00000290178 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.53
PAXBP1-201ENST00000290178 A8MUU9 505 aa11.74□□□□□ -0.53
PAXBP1-201ENST00000290178 SEC61GP60059 68 aa11.74□□□□□ -0.53
PAXBP1-201ENST00000290178 C20orf166-AS1Q96NR2 134 aa11.74□□□□□ -0.53
PAXBP1-201ENST00000290178 KTN1-AS1Q86SY8 53 aa11.72□□□□□ -0.53
PAXBP1-201ENST00000290178 SPATA8Q6RVD6 105 aa11.64□□□□□ -0.55
PAXBP1-201ENST00000290178 LRP1Q07954 4544 aaKnown RBP11.63□□□□□ -0.55
PAXBP1-201ENST00000290178 KRTAP3-1Q9BYR8 98 aa11.63□□□□□ -0.55
PAXBP1-201ENST00000290178 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
PAXBP1-201ENST00000290178 UQCR11O14957 56 aa11.62□□□□□ -0.55
PAXBP1-201ENST00000290178 MIR22HGQ0VDD5 57 aa11.62□□□□□ -0.55
PAXBP1-201ENST00000290178 FAT3Q8TDW7 4589 aa11.53□□□□□ -0.56
PAXBP1-201ENST00000290178 TNXBP22105 4242 aa11.51□□□□□ -0.57
PAXBP1-201ENST00000290178 HSPG2P98160 4391 aa11.46□□□□□ -0.58
PAXBP1-201ENST00000290178 RBM12B-AS1Q9P1G2 102 aa11.45□□□□□ -0.58
PAXBP1-201ENST00000290178 Q5VSD8 79 aa11.44□□□□□ -0.58
PAXBP1-201ENST00000290178 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
PAXBP1-201ENST00000290178 ADM2Q7Z4H4 148 aa11.41□□□□□ -0.58
PAXBP1-201ENST00000290178 KRTAP17-1Q9BYP8 105 aa11.4□□□□□ -0.58
PAXBP1-201ENST00000290178 PRAC1Q96KF2 57 aa11.39□□□□□ -0.59
PAXBP1-201ENST00000290178 RYR3Q15413 4870 aa11.38□□□□□ -0.59
PAXBP1-201ENST00000290178 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
PAXBP1-201ENST00000290178 COX6B2Q6YFQ2 88 aa11.36□□□□□ -0.59
PAXBP1-201ENST00000290178 MYCBP2O75592 4640 aa11.35□□□□□ -0.59
PAXBP1-201ENST00000290178 H0YAA0 97 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms