RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 KRTAP10-2P60368 255 aa9.9□□□□□ -0.83
TRIM11-201ENST00000284551 C1orf134Q5TEV5 83 aa9.9□□□□□ -0.83
TRIM11-201ENST00000284551 ZNF861PO60384 105 aa9.89□□□□□ -0.83
TRIM11-201ENST00000284551 LRP1BQ9NZR2 4599 aa9.89□□□□□ -0.83
TRIM11-201ENST00000284551 NDUFB1O75438 58 aa9.88□□□□□ -0.83
TRIM11-201ENST00000284551 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
TRIM11-201ENST00000284551 Q8N9P0 234 aaPredicted RBP9.88□□□□□ -0.83
TRIM11-201ENST00000284551 SPINK6Q6UWN8 80 aa9.84□□□□□ -0.83
TRIM11-201ENST00000284551 C8orf17Q9NRJ1 99 aa9.82□□□□□ -0.84
TRIM11-201ENST00000284551 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
TRIM11-201ENST00000284551 PKD1P98161 4303 aa9.81□□□□□ -0.84
TRIM11-201ENST00000284551 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
TRIM11-201ENST00000284551 LCA10Q71F78 164 aa9.81□□□□□ -0.84
TRIM11-201ENST00000284551 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
TRIM11-201ENST00000284551 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
TRIM11-201ENST00000284551 A6NED7 52 aa9.8□□□□□ -0.84
TRIM11-201ENST00000284551 NDUFS5O43920 106 aa9.8□□□□□ -0.84
TRIM11-201ENST00000284551 ZNF706Q9Y5V0 76 aaPredicted RBP9.79□□□□□ -0.84
TRIM11-201ENST00000284551 A0A1B0GVX0 72 aa9.77□□□□□ -0.84
TRIM11-201ENST00000284551 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
TRIM11-201ENST00000284551 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
TRIM11-201ENST00000284551 COA5Q86WW8 74 aa9.76□□□□□ -0.85
TRIM11-201ENST00000284551 CD164Q04900 197 aa9.74□□□□□ -0.85
TRIM11-201ENST00000284551 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
TRIM11-201ENST00000284551 KRTAP10-1P60331 282 aa9.73□□□□□ -0.85
TRIM11-201ENST00000284551 VPS13BQ7Z7G8 4022 aa9.72□□□□□ -0.85
TRIM11-201ENST00000284551 SPANXA2-OT1Q8N9U9 137 aa9.72□□□□□ -0.85
TRIM11-201ENST00000284551 RBM12B-AS1Q9P1G2 102 aa9.71□□□□□ -0.85
TRIM11-201ENST00000284551 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
TRIM11-201ENST00000284551 KTN1-AS1Q86SY8 53 aa9.69□□□□□ -0.86
TRIM11-201ENST00000284551 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
TRIM11-201ENST00000284551 Q5W150 140 aa9.69□□□□□ -0.86
TRIM11-201ENST00000284551 MRPL34Q9BQ48 92 aaKnown RBP9.69□□□□□ -0.86
TRIM11-201ENST00000284551 H3BPC8 53 aa9.66□□□□□ -0.86
TRIM11-201ENST00000284551 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
TRIM11-201ENST00000284551 Q75L30 129 aa9.65□□□□□ -0.86
TRIM11-201ENST00000284551 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
TRIM11-201ENST00000284551 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
TRIM11-201ENST00000284551 IGLV7-46A0A075B6I9 117 aa9.62□□□□□ -0.87
TRIM11-201ENST00000284551 A6NN06 94 aa9.61□□□□□ -0.87
TRIM11-201ENST00000284551 SPINK7P58062 85 aa9.61□□□□□ -0.87
TRIM11-201ENST00000284551 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
TRIM11-201ENST00000284551 LOC101927531A0A1B0GV80 90 aa9.61□□□□□ -0.87
TRIM11-201ENST00000284551 Q6ZSA8 131 aa9.57□□□□□ -0.88
TRIM11-201ENST00000284551 CDC42SE1Q9NRR8 79 aa9.57□□□□□ -0.88
TRIM11-201ENST00000284551 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
TRIM11-201ENST00000284551 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
TRIM11-201ENST00000284551 SSBP3-AS1Q7Z2R9 100 aa9.54□□□□□ -0.88
TRIM11-201ENST00000284551 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
TRIM11-201ENST00000284551 HRES1P13985 223 aa9.54□□□□□ -0.88
TRIM11-201ENST00000284551 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
TRIM11-201ENST00000284551 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
TRIM11-201ENST00000284551 FAT1Q14517 4588 aa9.49□□□□□ -0.89
TRIM11-201ENST00000284551 LINC00313P59037 77 aa9.47□□□□□ -0.89
TRIM11-201ENST00000284551 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
TRIM11-201ENST00000284551 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
TRIM11-201ENST00000284551 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
TRIM11-201ENST00000284551 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
TRIM11-201ENST00000284551 PLA2G1BP04054 148 aaKnown RBP9.43□□□□□ -0.9
TRIM11-201ENST00000284551 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
TRIM11-201ENST00000284551 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
TRIM11-201ENST00000284551 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
TRIM11-201ENST00000284551 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
TRIM11-201ENST00000284551 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
TRIM11-201ENST00000284551 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
TRIM11-201ENST00000284551 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
TRIM11-201ENST00000284551 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
TRIM11-201ENST00000284551 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
TRIM11-201ENST00000284551 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
TRIM11-201ENST00000284551 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
TRIM11-201ENST00000284551 ACYP2P14621 99 aa9.22□□□□□ -0.93
TRIM11-201ENST00000284551 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
TRIM11-201ENST00000284551 SPINK1P00995 79 aa9.2□□□□□ -0.94
TRIM11-201ENST00000284551 RYR2Q92736 4967 aa9.2□□□□□ -0.94
TRIM11-201ENST00000284551 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
TRIM11-201ENST00000284551 A0A1B0GU69 56 aa9.18□□□□□ -0.94
TRIM11-201ENST00000284551 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
TRIM11-201ENST00000284551 LRP1Q07954 4544 aaKnown RBP9.15□□□□□ -0.94
TRIM11-201ENST00000284551 A0A1B0GVY2 172 aa9.15□□□□□ -0.95
TRIM11-201ENST00000284551 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.95
TRIM11-201ENST00000284551 Q8N1X5 172 aa9.14□□□□□ -0.95
TRIM11-201ENST00000284551 LINC01554Q52M75 96 aa9.1□□□□□ -0.95
TRIM11-201ENST00000284551 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
TRIM11-201ENST00000284551 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
TRIM11-201ENST00000284551 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
TRIM11-201ENST00000284551 FLG2Q5D862 2391 aaPredicted RBP9.03□□□□□ -0.96
TRIM11-201ENST00000284551 RYR3Q15413 4870 aa9.03□□□□□ -0.96
TRIM11-201ENST00000284551 UQCR11O14957 56 aa9.02□□□□□ -0.97
TRIM11-201ENST00000284551 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
TRIM11-201ENST00000284551 H3BS24 57 aa8.97□□□□□ -0.97
TRIM11-201ENST00000284551 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
TRIM11-201ENST00000284551 HSPG2P98160 4391 aa8.95□□□□□ -0.98
TRIM11-201ENST00000284551 TNXBP22105 4242 aa8.94□□□□□ -0.98
TRIM11-201ENST00000284551 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
TRIM11-201ENST00000284551 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
TRIM11-201ENST00000284551 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
TRIM11-201ENST00000284551 A8MUU9 505 aa8.92□□□□□ -0.98
TRIM11-201ENST00000284551 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
TRIM11-201ENST00000284551 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
TRIM11-201ENST00000284551 KIAA1109Q2LD37 5005 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms