RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 A0A1B0GVX0 72 aa4.29□□□□□ -1.72
SPARCL1-201ENST00000282470 H0Y9P7 68 aa4.29□□□□□ -1.72
SPARCL1-201ENST00000282470 FAM229BQ4G0N7 80 aa4.29□□□□□ -1.72
SPARCL1-201ENST00000282470 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
SPARCL1-201ENST00000282470 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
SPARCL1-201ENST00000282470 LINC00208Q96KT6 92 aa4.28□□□□□ -1.72
SPARCL1-201ENST00000282470 TP53AIP1Q9HCN2 124 aa4.28□□□□□ -1.72
SPARCL1-201ENST00000282470 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
SPARCL1-201ENST00000282470 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
SPARCL1-201ENST00000282470 HYDINQ4G0P3 5121 aa4.26□□□□□ -1.73
SPARCL1-201ENST00000282470 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
SPARCL1-201ENST00000282470 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
SPARCL1-201ENST00000282470 LRP1BQ9NZR2 4599 aa4.26□□□□□ -1.73
SPARCL1-201ENST00000282470 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
SPARCL1-201ENST00000282470 IGHV6-1A0A0B4J1U7 121 aa4.25□□□□□ -1.73
SPARCL1-201ENST00000282470 CDK2AP2O75956 126 aa4.25□□□□□ -1.73
SPARCL1-201ENST00000282470 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
SPARCL1-201ENST00000282470 NDUFS5O43920 106 aa4.23□□□□□ -1.73
SPARCL1-201ENST00000282470 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
SPARCL1-201ENST00000282470 A0A087X002 238 aa4.22□□□□□ -1.73
SPARCL1-201ENST00000282470 KRTAP13-2Q52LG2 175 aa4.22□□□□□ -1.73
SPARCL1-201ENST00000282470 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
SPARCL1-201ENST00000282470 C4orf48Q5BLP8 95 aa4.22□□□□□ -1.73
SPARCL1-201ENST00000282470 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
SPARCL1-201ENST00000282470 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
SPARCL1-201ENST00000282470 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
SPARCL1-201ENST00000282470 C8orf87E5RJ46 101 aa4.2□□□□□ -1.74
SPARCL1-201ENST00000282470 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
SPARCL1-201ENST00000282470 LCE2BO14633 110 aa4.2□□□□□ -1.74
SPARCL1-201ENST00000282470 PRR4Q16378 134 aa4.2□□□□□ -1.74
SPARCL1-201ENST00000282470 SACSQ9NZJ4 4579 aa4.19□□□□□ -1.74
SPARCL1-201ENST00000282470 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
SPARCL1-201ENST00000282470 SPINK6Q6UWN8 80 aa4.19□□□□□ -1.74
SPARCL1-201ENST00000282470 ATP11AUNQ6ZP68 121 aa4.18□□□□□ -1.74
SPARCL1-201ENST00000282470 LOC101927531A0A1B0GV80 90 aa4.16□□□□□ -1.74
SPARCL1-201ENST00000282470 LIMD2Q9BT23 127 aa4.16□□□□□ -1.74
SPARCL1-201ENST00000282470 LINC00313P59037 77 aa4.15□□□□□ -1.75
SPARCL1-201ENST00000282470 Q5VV11 94 aa4.15□□□□□ -1.75
SPARCL1-201ENST00000282470 Q5W150 140 aa4.15□□□□□ -1.75
SPARCL1-201ENST00000282470 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.75
SPARCL1-201ENST00000282470 PSPHP1O15172 72 aa4.15□□□□□ -1.75
SPARCL1-201ENST00000282470 PCOTHQ58A44 107 aa4.15□□□□□ -1.75
SPARCL1-201ENST00000282470 A6NN06 94 aa4.13□□□□□ -1.75
SPARCL1-201ENST00000282470 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
SPARCL1-201ENST00000282470 COA5Q86WW8 74 aa4.13□□□□□ -1.75
SPARCL1-201ENST00000282470 PLA2G1BP04054 148 aaKnown RBP4.13□□□□□ -1.75
SPARCL1-201ENST00000282470 A8MUN3 132 aa4.12□□□□□ -1.75
SPARCL1-201ENST00000282470 SPINK1P00995 79 aa4.12□□□□□ -1.75
SPARCL1-201ENST00000282470 C7orf65Q6ZTY9 151 aa4.12□□□□□ -1.75
SPARCL1-201ENST00000282470 FAM229AH3BQW9 127 aa4.12□□□□□ -1.75
SPARCL1-201ENST00000282470 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 TYMSOSQ8TAI1 123 aa4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 DYNC1H1Q14204 4646 aaKnown RBP4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 LCA10Q71F78 164 aa4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 Q75L30 129 aa4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
SPARCL1-201ENST00000282470 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
SPARCL1-201ENST00000282470 CHKB-CPT1BH3BT56 60 aa4.09□□□□□ -1.75
SPARCL1-201ENST00000282470 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
SPARCL1-201ENST00000282470 HRES1P13985 223 aa4.08□□□□□ -1.76
SPARCL1-201ENST00000282470 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
SPARCL1-201ENST00000282470 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
SPARCL1-201ENST00000282470 SPAG11AQ6PDA7 123 aa4.08□□□□□ -1.76
SPARCL1-201ENST00000282470 LINC00304Q8N9R0 145 aa4.07□□□□□ -1.76
SPARCL1-201ENST00000282470 RYR2Q92736 4967 aa4.06□□□□□ -1.76
SPARCL1-201ENST00000282470 PRR26Q8N8Z3 221 aa4.06□□□□□ -1.76
SPARCL1-201ENST00000282470 A8MU10 97 aa4.05□□□□□ -1.76
SPARCL1-201ENST00000282470 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
SPARCL1-201ENST00000282470 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
SPARCL1-201ENST00000282470 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
SPARCL1-201ENST00000282470 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
SPARCL1-201ENST00000282470 A6NED7 52 aa4.04□□□□□ -1.76
SPARCL1-201ENST00000282470 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
SPARCL1-201ENST00000282470 ACYP2P14621 99 aa4.04□□□□□ -1.76
SPARCL1-201ENST00000282470 FAT1Q14517 4588 aa4.03□□□□□ -1.76
SPARCL1-201ENST00000282470 H3BS24 57 aa4.02□□□□□ -1.77
SPARCL1-201ENST00000282470 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
SPARCL1-201ENST00000282470 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
SPARCL1-201ENST00000282470 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
SPARCL1-201ENST00000282470 A8MUU9 505 aa3.98□□□□□ -1.77
SPARCL1-201ENST00000282470 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
SPARCL1-201ENST00000282470 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
SPARCL1-201ENST00000282470 TNXBP22105 4242 aa3.95□□□□□ -1.78
SPARCL1-201ENST00000282470 HSPG2P98160 4391 aa3.94□□□□□ -1.78
SPARCL1-201ENST00000282470 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
SPARCL1-201ENST00000282470 SPINK7P58062 85 aa3.91□□□□□ -1.78
SPARCL1-201ENST00000282470 FLG2Q5D862 2391 aaPredicted RBP3.91□□□□□ -1.78
SPARCL1-201ENST00000282470 J3QL48 77 aa3.91□□□□□ -1.78
SPARCL1-201ENST00000282470 KRTAP10-8P60410 259 aa3.91□□□□□ -1.78
SPARCL1-201ENST00000282470 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.78
SPARCL1-201ENST00000282470 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.78
SPARCL1-201ENST00000282470 Q8N1X5 172 aa3.89□□□□□ -1.79
SPARCL1-201ENST00000282470 A0A1B0GU69 56 aa3.88□□□□□ -1.79
SPARCL1-201ENST00000282470 Q5VSD8 79 aa3.88□□□□□ -1.79
SPARCL1-201ENST00000282470 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
SPARCL1-201ENST00000282470 RYR3Q15413 4870 aa3.88□□□□□ -1.79
SPARCL1-201ENST00000282470 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
SPARCL1-201ENST00000282470 RYR1P21817 5038 aa3.86□□□□□ -1.79
SPARCL1-201ENST00000282470 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms