RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 VPS13BQ7Z7G8 4022 aa11.68□□□□□ -0.54
CDC42EP2-201ENST00000279249 H0Y9J4 135 aa11.68□□□□□ -0.54
CDC42EP2-201ENST00000279249 UBE2AP49459 152 aa11.68□□□□□ -0.54
CDC42EP2-201ENST00000279249 H0Y9P7 68 aa11.67□□□□□ -0.54
CDC42EP2-201ENST00000279249 HSPG2P98160 4391 aa11.66□□□□□ -0.54
CDC42EP2-201ENST00000279249 A0A087WSZ3 146 aa11.65□□□□□ -0.54
CDC42EP2-201ENST00000279249 IGLV7-43P04211 117 aa11.65□□□□□ -0.54
CDC42EP2-201ENST00000279249 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
CDC42EP2-201ENST00000279249 FAT1Q14517 4588 aa11.64□□□□□ -0.55
CDC42EP2-201ENST00000279249 CASC2Q6XLA1 102 aa11.64□□□□□ -0.55
CDC42EP2-201ENST00000279249 RPL37AP61513 92 aaKnown RBP11.63□□□□□ -0.55
CDC42EP2-201ENST00000279249 KIAA1109Q2LD37 5005 aa11.63□□□□□ -0.55
CDC42EP2-201ENST00000279249 ZNF861PO60384 105 aa11.62□□□□□ -0.55
CDC42EP2-201ENST00000279249 A8MWP4 228 aa11.6□□□□□ -0.55
CDC42EP2-201ENST00000279249 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
CDC42EP2-201ENST00000279249 DEFB116Q30KQ4 102 aa11.59□□□□□ -0.55
CDC42EP2-201ENST00000279249 SRRM2Q9UQ35 2752 aaKnown RBP11.59□□□□□ -0.55
CDC42EP2-201ENST00000279249 CD164Q04900 197 aa11.59□□□□□ -0.55
CDC42EP2-201ENST00000279249 SPRR1BP22528 89 aa11.58□□□□□ -0.56
CDC42EP2-201ENST00000279249 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
CDC42EP2-201ENST00000279249 Q75L30 129 aa11.57□□□□□ -0.56
CDC42EP2-201ENST00000279249 LOC101927531A0A1B0GV80 90 aa11.57□□□□□ -0.56
CDC42EP2-201ENST00000279249 CHKB-CPT1BH3BT56 60 aa11.57□□□□□ -0.56
CDC42EP2-201ENST00000279249 A0A0G2JQZ4 141 aa11.55□□□□□ -0.56
CDC42EP2-201ENST00000279249 LINC00472Q9H8W2 130 aa11.55□□□□□ -0.56
CDC42EP2-201ENST00000279249 IGLV7-46A0A075B6I9 117 aa11.53□□□□□ -0.56
CDC42EP2-201ENST00000279249 BIRC6Q9NR09 4857 aa11.53□□□□□ -0.56
CDC42EP2-201ENST00000279249 PRR15LQ9BU68 103 aa11.53□□□□□ -0.56
CDC42EP2-201ENST00000279249 ATP11AUNQ6ZP68 121 aa11.52□□□□□ -0.57
CDC42EP2-201ENST00000279249 Q5VSD8 79 aa11.5□□□□□ -0.57
CDC42EP2-201ENST00000279249 FAM229AH3BQW9 127 aa11.5□□□□□ -0.57
CDC42EP2-201ENST00000279249 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
CDC42EP2-201ENST00000279249 COA5Q86WW8 74 aa11.49□□□□□ -0.57
CDC42EP2-201ENST00000279249 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
CDC42EP2-201ENST00000279249 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.57
CDC42EP2-201ENST00000279249 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.57
CDC42EP2-201ENST00000279249 PKHD1L1Q86WI1 4243 aa11.46□□□□□ -0.58
CDC42EP2-201ENST00000279249 A8MU10 97 aa11.45□□□□□ -0.58
CDC42EP2-201ENST00000279249 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
CDC42EP2-201ENST00000279249 Q8N1X5 172 aa11.45□□□□□ -0.58
CDC42EP2-201ENST00000279249 ZNF706Q9Y5V0 76 aaPredicted RBP11.44□□□□□ -0.58
CDC42EP2-201ENST00000279249 NDUFS5O43920 106 aa11.43□□□□□ -0.58
CDC42EP2-201ENST00000279249 LINC00483Q53H64 154 aa11.43□□□□□ -0.58
CDC42EP2-201ENST00000279249 ANAPC11Q9NYG5 84 aa11.43□□□□□ -0.58
CDC42EP2-201ENST00000279249 ASB16-AS1Q495Z4 193 aa11.42□□□□□ -0.58
CDC42EP2-201ENST00000279249 CDC42SE1Q9NRR8 79 aa11.42□□□□□ -0.58
CDC42EP2-201ENST00000279249 LCA10Q71F78 164 aa11.42□□□□□ -0.58
CDC42EP2-201ENST00000279249 A6NED7 52 aa11.41□□□□□ -0.58
CDC42EP2-201ENST00000279249 LINC01558Q9Y6Z2 57 aa11.41□□□□□ -0.58
CDC42EP2-201ENST00000279249 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
CDC42EP2-201ENST00000279249 MOBPQ13875 183 aa11.4□□□□□ -0.59
CDC42EP2-201ENST00000279249 A6NN06 94 aa11.36□□□□□ -0.59
CDC42EP2-201ENST00000279249 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
CDC42EP2-201ENST00000279249 A0A087X002 238 aa11.32□□□□□ -0.6
CDC42EP2-201ENST00000279249 KRTAP4-5Q9BYR2 181 aa11.32□□□□□ -0.6
CDC42EP2-201ENST00000279249 HERC2O95714 4834 aa11.32□□□□□ -0.6
CDC42EP2-201ENST00000279249 IGLV9-49A0A0B4J1Y8 123 aa11.3□□□□□ -0.6
CDC42EP2-201ENST00000279249 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
CDC42EP2-201ENST00000279249 Q96NJ1 140 aa11.28□□□□□ -0.6
CDC42EP2-201ENST00000279249 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
CDC42EP2-201ENST00000279249 RBM12B-AS1Q9P1G2 102 aa11.28□□□□□ -0.6
CDC42EP2-201ENST00000279249 PCOTHQ58A44 107 aa11.27□□□□□ -0.61
CDC42EP2-201ENST00000279249 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
CDC42EP2-201ENST00000279249 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
CDC42EP2-201ENST00000279249 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
CDC42EP2-201ENST00000279249 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
CDC42EP2-201ENST00000279249 HRES1P13985 223 aa11.21□□□□□ -0.62
CDC42EP2-201ENST00000279249 A0A1B0GVX0 72 aa11.2□□□□□ -0.62
CDC42EP2-201ENST00000279249 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
CDC42EP2-201ENST00000279249 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
CDC42EP2-201ENST00000279249 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
CDC42EP2-201ENST00000279249 SSBP3-AS1Q7Z2R9 100 aa11.16□□□□□ -0.62
CDC42EP2-201ENST00000279249 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
CDC42EP2-201ENST00000279249 ABCA13Q86UQ4 5058 aa11.15□□□□□ -0.62
CDC42EP2-201ENST00000279249 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
CDC42EP2-201ENST00000279249 SPINK7P58062 85 aa11.12□□□□□ -0.63
CDC42EP2-201ENST00000279249 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
CDC42EP2-201ENST00000279249 TNXBP22105 4242 aa11.1□□□□□ -0.63
CDC42EP2-201ENST00000279249 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
CDC42EP2-201ENST00000279249 MT1HL1P0DM35 61 aa11.05□□□□□ -0.64
CDC42EP2-201ENST00000279249 LINC00304Q8N9R0 145 aa11.03□□□□□ -0.64
CDC42EP2-201ENST00000279249 KRTAP13-3Q3SY46 172 aa11.02□□□□□ -0.64
CDC42EP2-201ENST00000279249 ACYP2P14621 99 aa11.02□□□□□ -0.65
CDC42EP2-201ENST00000279249 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
CDC42EP2-201ENST00000279249 SPINK1P00995 79 aa10.96□□□□□ -0.66
CDC42EP2-201ENST00000279249 NOTCH2NLQ7Z3S9 236 aa10.94□□□□□ -0.66
CDC42EP2-201ENST00000279249 DMAC1Q96GE9 116 aa10.94□□□□□ -0.66
CDC42EP2-201ENST00000279249 C8orf87E5RJ46 101 aa10.92□□□□□ -0.66
CDC42EP2-201ENST00000279249 Q5W150 140 aa10.92□□□□□ -0.66
CDC42EP2-201ENST00000279249 RPS29P62273 56 aaKnown RBP10.91□□□□□ -0.66
CDC42EP2-201ENST00000279249 LINC00313P59037 77 aa10.88□□□□□ -0.67
CDC42EP2-201ENST00000279249 DMBT1Q9UGM3 2413 aaPredicted RBP10.87□□□□□ -0.67
CDC42EP2-201ENST00000279249 PCLOQ9Y6V0 5065 aa10.87□□□□□ -0.67
CDC42EP2-201ENST00000279249 SPATA8Q6RVD6 105 aa10.85□□□□□ -0.67
CDC42EP2-201ENST00000279249 A0A1B0GU69 56 aa10.83□□□□□ -0.68
CDC42EP2-201ENST00000279249 J3QL48 77 aa10.81□□□□□ -0.68
CDC42EP2-201ENST00000279249 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.68
CDC42EP2-201ENST00000279249 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
CDC42EP2-201ENST00000279249 UQCR11O14957 56 aa10.74□□□□□ -0.69
CDC42EP2-201ENST00000279249 MIR22HGQ0VDD5 57 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms