RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PRR4Q16378 134 aa10.45□□□□□ -0.74
CAPN1-201ENST00000279247 OXTP01178 125 aa10.44□□□□□ -0.74
CAPN1-201ENST00000279247 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
CAPN1-201ENST00000279247 C5orf47Q569G3 176 aa10.43□□□□□ -0.74
CAPN1-201ENST00000279247 MP68P56378 58 aa10.43□□□□□ -0.74
CAPN1-201ENST00000279247 H0Y9P7 68 aa10.42□□□□□ -0.74
CAPN1-201ENST00000279247 NDUFC1O43677 76 aa10.42□□□□□ -0.74
CAPN1-201ENST00000279247 TYMSOSQ8TAI1 123 aa10.4□□□□□ -0.74
CAPN1-201ENST00000279247 PRR26Q8N8Z3 221 aa10.39□□□□□ -0.75
CAPN1-201ENST00000279247 FAM229BQ4G0N7 80 aa10.36□□□□□ -0.75
CAPN1-201ENST00000279247 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
CAPN1-201ENST00000279247 CD164Q04900 197 aa10.36□□□□□ -0.75
CAPN1-201ENST00000279247 KIAA1109Q2LD37 5005 aa10.35□□□□□ -0.75
CAPN1-201ENST00000279247 ZCCHC13Q8WW36 166 aaKnown RBP10.33□□□□□ -0.75
CAPN1-201ENST00000279247 TRAV22A0A0B4J277 110 aa10.33□□□□□ -0.76
CAPN1-201ENST00000279247 C1orf64Q8NEQ6 169 aa10.33□□□□□ -0.76
CAPN1-201ENST00000279247 MRPL34Q9BQ48 92 aaKnown RBP10.33□□□□□ -0.76
CAPN1-201ENST00000279247 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
CAPN1-201ENST00000279247 HSPG2P98160 4391 aa10.31□□□□□ -0.76
CAPN1-201ENST00000279247 RPS28P62857 69 aaKnown RBP10.3□□□□□ -0.76
CAPN1-201ENST00000279247 RETNLBQ9BQ08 111 aa10.3□□□□□ -0.76
CAPN1-201ENST00000279247 PCOTHQ58A44 107 aa10.3□□□□□ -0.76
CAPN1-201ENST00000279247 SERP1Q9Y6X1 66 aa10.28□□□□□ -0.76
CAPN1-201ENST00000279247 ASB16-AS1Q495Z4 193 aa10.27□□□□□ -0.77
CAPN1-201ENST00000279247 LINC00313P59037 77 aa10.25□□□□□ -0.77
CAPN1-201ENST00000279247 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
CAPN1-201ENST00000279247 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
CAPN1-201ENST00000279247 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-201ENST00000279247 LINC00304Q8N9R0 145 aa10.23□□□□□ -0.77
CAPN1-201ENST00000279247 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
CAPN1-201ENST00000279247 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
CAPN1-201ENST00000279247 ATP5EP56381 51 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-201ENST00000279247 Q5W150 140 aa10.21□□□□□ -0.78
CAPN1-201ENST00000279247 RYR1P21817 5038 aa10.2□□□□□ -0.78
CAPN1-201ENST00000279247 SPINK1P00995 79 aa10.18□□□□□ -0.78
CAPN1-201ENST00000279247 KRTAP10-4P60372 401 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-201ENST00000279247 C4orf26Q17RF5 130 aa10.15□□□□□ -0.78
CAPN1-201ENST00000279247 C8orf87E5RJ46 101 aa10.15□□□□□ -0.78
CAPN1-201ENST00000279247 H3BPC8 53 aa10.15□□□□□ -0.78
CAPN1-201ENST00000279247 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
CAPN1-201ENST00000279247 Q5XG85 94 aa10.14□□□□□ -0.79
CAPN1-201ENST00000279247 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
CAPN1-201ENST00000279247 DMBT1Q9UGM3 2413 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-201ENST00000279247 FP248Q71RG6 208 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-201ENST00000279247 Q5VSD8 79 aa10.09□□□□□ -0.79
CAPN1-201ENST00000279247 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
CAPN1-201ENST00000279247 FAM229AH3BQW9 127 aa10.08□□□□□ -0.8
CAPN1-201ENST00000279247 SMIM26A0A096LP01 95 aa10.08□□□□□ -0.8
CAPN1-201ENST00000279247 C9orf92A6NGG3 77 aa10.07□□□□□ -0.8
CAPN1-201ENST00000279247 Q8N9P0 234 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-201ENST00000279247 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
CAPN1-201ENST00000279247 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
CAPN1-201ENST00000279247 CYP4F30PQ9H0H9 118 aa10.03□□□□□ -0.8
CAPN1-201ENST00000279247 KRTAP13-3Q3SY46 172 aa10□□□□□ -0.81
CAPN1-201ENST00000279247 SPANXA2-OT1Q8N9U9 137 aa10□□□□□ -0.81
CAPN1-201ENST00000279247 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
CAPN1-201ENST00000279247 IGKV2-30P06310 120 aa10□□□□□ -0.81
CAPN1-201ENST00000279247 LOC101927531A0A1B0GV80 90 aa9.99□□□□□ -0.81
CAPN1-201ENST00000279247 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
CAPN1-201ENST00000279247 Q8N1X5 172 aa9.94□□□□□ -0.82
CAPN1-201ENST00000279247 KRTAP4-5Q9BYR2 181 aa9.94□□□□□ -0.82
CAPN1-201ENST00000279247 COA5Q86WW8 74 aa9.93□□□□□ -0.82
CAPN1-201ENST00000279247 TNXBP22105 4242 aa9.91□□□□□ -0.82
CAPN1-201ENST00000279247 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
CAPN1-201ENST00000279247 HRES1P13985 223 aa9.9□□□□□ -0.82
CAPN1-201ENST00000279247 PSPHP1O15172 72 aa9.89□□□□□ -0.83
CAPN1-201ENST00000279247 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
CAPN1-201ENST00000279247 ABCA13Q86UQ4 5058 aa9.82□□□□□ -0.84
CAPN1-201ENST00000279247 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
CAPN1-201ENST00000279247 A8MUN3 132 aa9.77□□□□□ -0.85
CAPN1-201ENST00000279247 Q1T7F1 81 aa9.74□□□□□ -0.85
CAPN1-201ENST00000279247 BIRC6Q9NR09 4857 aa9.74□□□□□ -0.85
CAPN1-201ENST00000279247 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
CAPN1-201ENST00000279247 ACYP2P14621 99 aa9.72□□□□□ -0.85
CAPN1-201ENST00000279247 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
CAPN1-201ENST00000279247 HERC2O95714 4834 aa9.72□□□□□ -0.85
CAPN1-201ENST00000279247 C7orf65Q6ZTY9 151 aa9.72□□□□□ -0.85
CAPN1-201ENST00000279247 PRR15LQ9BU68 103 aa9.71□□□□□ -0.85
CAPN1-201ENST00000279247 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
CAPN1-201ENST00000279247 A8MUU9 505 aa9.69□□□□□ -0.86
CAPN1-201ENST00000279247 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
CAPN1-201ENST00000279247 MT1HL1P0DM35 61 aa9.67□□□□□ -0.86
CAPN1-201ENST00000279247 V9GYY9 64 aa9.63□□□□□ -0.87
CAPN1-201ENST00000279247 SPINK7P58062 85 aa9.61□□□□□ -0.87
CAPN1-201ENST00000279247 Q5VV11 94 aa9.6□□□□□ -0.87
CAPN1-201ENST00000279247 LPAP08519 4548 aa9.56□□□□□ -0.88
CAPN1-201ENST00000279247 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
CAPN1-201ENST00000279247 Q75L30 129 aa9.55□□□□□ -0.88
CAPN1-201ENST00000279247 PCLOQ9Y6V0 5065 aa9.54□□□□□ -0.88
CAPN1-201ENST00000279247 A8MU10 97 aa9.53□□□□□ -0.88
CAPN1-201ENST00000279247 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
CAPN1-201ENST00000279247 XP32Q5T750 250 aa9.5□□□□□ -0.89
CAPN1-201ENST00000279247 A6NED7 52 aa9.49□□□□□ -0.89
CAPN1-201ENST00000279247 PRO0628Q9UI54 55 aa9.47□□□□□ -0.89
CAPN1-201ENST00000279247 LRP2P98164 4655 aa9.44□□□□□ -0.9
CAPN1-201ENST00000279247 J3QL48 77 aa9.44□□□□□ -0.9
CAPN1-201ENST00000279247 RPL37P61927 97 aaKnown RBP9.43□□□□□ -0.9
CAPN1-201ENST00000279247 HERC1Q15751 4861 aa9.43□□□□□ -0.9
CAPN1-201ENST00000279247 KRTAP3-1Q9BYR8 98 aa9.43□□□□□ -0.9
CAPN1-201ENST00000279247 A0A1B0GU69 56 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms