RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 C1orf195Q5TG92 126 aa12.65□□□□□ -0.38
CCDC7-201ENST00000277657 LINC00304Q8N9R0 145 aa12.65□□□□□ -0.38
CCDC7-201ENST00000277657 IGHV6-1A0A0B4J1U7 121 aa12.63□□□□□ -0.39
CCDC7-201ENST00000277657 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
CCDC7-201ENST00000277657 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
CCDC7-201ENST00000277657 RPS29P62273 56 aaKnown RBP12.62□□□□□ -0.39
CCDC7-201ENST00000277657 hDV103S1A0JD37 113 aa12.61□□□□□ -0.39
CCDC7-201ENST00000277657 KIAA1109Q2LD37 5005 aa12.6□□□□□ -0.39
CCDC7-201ENST00000277657 C20orf197Q8N268 126 aa12.59□□□□□ -0.39
CCDC7-201ENST00000277657 KRTAP17-1Q9BYP8 105 aa12.57□□□□□ -0.4
CCDC7-201ENST00000277657 CYSTM1Q9H1C7 97 aa12.57□□□□□ -0.4
CCDC7-201ENST00000277657 NOTCH2NLQ7Z3S9 236 aa12.56□□□□□ -0.4
CCDC7-201ENST00000277657 KLKP1Q107X0 134 aa12.54□□□□□ -0.4
CCDC7-201ENST00000277657 TMEM254Q8TBM7 123 aa12.52□□□□□ -0.41
CCDC7-201ENST00000277657 C8orf87E5RJ46 101 aa12.51□□□□□ -0.41
CCDC7-201ENST00000277657 Q8N1X5 172 aa12.49□□□□□ -0.41
CCDC7-201ENST00000277657 MRPL34Q9BQ48 92 aaKnown RBP12.48□□□□□ -0.41
CCDC7-201ENST00000277657 C5orf47Q569G3 176 aa12.48□□□□□ -0.41
CCDC7-201ENST00000277657 SNURFQ9Y675 71 aa12.48□□□□□ -0.41
CCDC7-201ENST00000277657 LRP1Q07954 4544 aaKnown RBP12.48□□□□□ -0.41
CCDC7-201ENST00000277657 TNXBP22105 4242 aa12.47□□□□□ -0.41
CCDC7-201ENST00000277657 A0A0U1RQV1 116 aa12.47□□□□□ -0.41
CCDC7-201ENST00000277657 KRTAP10-8P60410 259 aa12.44□□□□□ -0.42
CCDC7-201ENST00000277657 LINC00313P59037 77 aa12.44□□□□□ -0.42
CCDC7-201ENST00000277657 FAT3Q8TDW7 4589 aa12.43□□□□□ -0.42
CCDC7-201ENST00000277657 TP53AIP1Q9HCN2 124 aa12.42□□□□□ -0.42
CCDC7-201ENST00000277657 H7BZZ5 65 aa12.39□□□□□ -0.43
CCDC7-201ENST00000277657 ZCCHC13Q8WW36 166 aaKnown RBP12.38□□□□□ -0.43
CCDC7-201ENST00000277657 NDUFC1O43677 76 aa12.37□□□□□ -0.43
CCDC7-201ENST00000277657 NDUFS5O43920 106 aa12.36□□□□□ -0.43
CCDC7-201ENST00000277657 MP68P56378 58 aa12.36□□□□□ -0.43
CCDC7-201ENST00000277657 TMEM258P61165 79 aa12.36□□□□□ -0.43
CCDC7-201ENST00000277657 H0Y9P7 68 aa12.35□□□□□ -0.43
CCDC7-201ENST00000277657 FLG2Q5D862 2391 aaPredicted RBP12.35□□□□□ -0.43
CCDC7-201ENST00000277657 KRTAP16-1A8MUX0 517 aa12.34□□□□□ -0.43
CCDC7-201ENST00000277657 HERC2O95714 4834 aa12.34□□□□□ -0.43
CCDC7-201ENST00000277657 TRAV22A0A0B4J277 110 aa12.34□□□□□ -0.43
CCDC7-201ENST00000277657 H3BPC8 53 aa12.32□□□□□ -0.44
CCDC7-201ENST00000277657 Q8N9P0 234 aaPredicted RBP12.31□□□□□ -0.44
CCDC7-201ENST00000277657 LINC00208Q96KT6 92 aa12.29□□□□□ -0.44
CCDC7-201ENST00000277657 MYCBP2O75592 4640 aa12.28□□□□□ -0.44
CCDC7-201ENST00000277657 MT1HL1P0DM35 61 aa12.24□□□□□ -0.45
CCDC7-201ENST00000277657 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
CCDC7-201ENST00000277657 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
CCDC7-201ENST00000277657 KRTAP13-3Q3SY46 172 aa12.23□□□□□ -0.45
CCDC7-201ENST00000277657 Q5W150 140 aa12.21□□□□□ -0.45
CCDC7-201ENST00000277657 FAM236DA0A1B0GTK5 79 aa12.19□□□□□ -0.46
CCDC7-201ENST00000277657 FAM236CP0DP71 79 aa12.19□□□□□ -0.46
CCDC7-201ENST00000277657 KRTAP4-5Q9BYR2 181 aa12.17□□□□□ -0.46
CCDC7-201ENST00000277657 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
CCDC7-201ENST00000277657 OXTP01178 125 aa12.14□□□□□ -0.47
CCDC7-201ENST00000277657 ATP5EP56381 51 aaPredicted RBP12.12□□□□□ -0.47
CCDC7-201ENST00000277657 C9orf92A6NGG3 77 aa12.1□□□□□ -0.47
CCDC7-201ENST00000277657 FP248Q71RG6 208 aaPredicted RBP12.1□□□□□ -0.47
CCDC7-201ENST00000277657 PCLOQ9Y6V0 5065 aa12.1□□□□□ -0.47
CCDC7-201ENST00000277657 LOC101927531A0A1B0GV80 90 aa12.09□□□□□ -0.47
CCDC7-201ENST00000277657 C20orf166-AS1Q96NR2 134 aa12.06□□□□□ -0.48
CCDC7-201ENST00000277657 A8MUU9 505 aa12.04□□□□□ -0.48
CCDC7-201ENST00000277657 RPS28P62857 69 aaKnown RBP12.03□□□□□ -0.48
CCDC7-201ENST00000277657 SPANXA2-OT1Q8N9U9 137 aa12.02□□□□□ -0.48
CCDC7-201ENST00000277657 CYP4F30PQ9H0H9 118 aa12.02□□□□□ -0.49
CCDC7-201ENST00000277657 PCOTHQ58A44 107 aa12□□□□□ -0.49
CCDC7-201ENST00000277657 ABCA13Q86UQ4 5058 aa12□□□□□ -0.49
CCDC7-201ENST00000277657 IGKV2-30P06310 120 aa11.97□□□□□ -0.49
CCDC7-201ENST00000277657 SERP1Q9Y6X1 66 aa11.97□□□□□ -0.49
CCDC7-201ENST00000277657 IGLV7-46A0A075B6I9 117 aa11.96□□□□□ -0.49
CCDC7-201ENST00000277657 PRR4Q16378 134 aa11.93□□□□□ -0.5
CCDC7-201ENST00000277657 Q75L30 129 aa11.92□□□□□ -0.5
CCDC7-201ENST00000277657 IGKV2D-30A0A075B6S6 120 aa11.85□□□□□ -0.51
CCDC7-201ENST00000277657 HRES1P13985 223 aa11.81□□□□□ -0.52
CCDC7-201ENST00000277657 XP32Q5T750 250 aa11.81□□□□□ -0.52
CCDC7-201ENST00000277657 C7orf65Q6ZTY9 151 aa11.8□□□□□ -0.52
CCDC7-201ENST00000277657 RPL37P61927 97 aaKnown RBP11.77□□□□□ -0.53
CCDC7-201ENST00000277657 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
CCDC7-201ENST00000277657 J3QL48 77 aa11.74□□□□□ -0.53
CCDC7-201ENST00000277657 ATP11AUNQ6ZP68 121 aa11.71□□□□□ -0.53
CCDC7-201ENST00000277657 DMAC1Q96GE9 116 aa11.68□□□□□ -0.54
CCDC7-201ENST00000277657 SMIM26A0A096LP01 95 aa11.67□□□□□ -0.54
CCDC7-201ENST00000277657 SPINK7P58062 85 aa11.67□□□□□ -0.54
CCDC7-201ENST00000277657 COA5Q86WW8 74 aa11.66□□□□□ -0.54
CCDC7-201ENST00000277657 ACYP2P14621 99 aa11.6□□□□□ -0.55
CCDC7-201ENST00000277657 LPAP08519 4548 aa11.57□□□□□ -0.56
CCDC7-201ENST00000277657 LRP2P98164 4655 aa11.56□□□□□ -0.56
CCDC7-201ENST00000277657 C4orf26Q17RF5 130 aa11.55□□□□□ -0.56
CCDC7-201ENST00000277657 A8MUN3 132 aa11.49□□□□□ -0.57
CCDC7-201ENST00000277657 MPLKIPQ8TAP9 179 aa11.45□□□□□ -0.58
CCDC7-201ENST00000277657 KRTAP3-1Q9BYR8 98 aa11.44□□□□□ -0.58
CCDC7-201ENST00000277657 Q1T7F1 81 aa11.43□□□□□ -0.58
CCDC7-201ENST00000277657 CHKB-CPT1BH3BT56 60 aa11.4□□□□□ -0.59
CCDC7-201ENST00000277657 COX6B2Q6YFQ2 88 aa11.4□□□□□ -0.59
CCDC7-201ENST00000277657 HERC1Q15751 4861 aa11.39□□□□□ -0.59
CCDC7-201ENST00000277657 V9GYY9 64 aa11.35□□□□□ -0.59
CCDC7-201ENST00000277657 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
CCDC7-201ENST00000277657 LINC01558Q9Y6Z2 57 aa11.25□□□□□ -0.61
CCDC7-201ENST00000277657 HMCN2Q8NDA2 5059 aa11.22□□□□□ -0.61
CCDC7-201ENST00000277657 MUC17Q685J3 4493 aa11.21□□□□□ -0.62
CCDC7-201ENST00000277657 PSPHP1O15172 72 aa11.2□□□□□ -0.62
CCDC7-201ENST00000277657 PRR15LQ9BU68 103 aa11.16□□□□□ -0.62
CCDC7-201ENST00000277657 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
CCDC7-201ENST00000277657 Q5VV11 94 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms