RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
C9orf3-201ENST00000277198 MOBPQ13875 183 aa7.8□□□□□ -1.16
C9orf3-201ENST00000277198 KRTAP4-5Q9BYR2 181 aa7.8□□□□□ -1.16
C9orf3-201ENST00000277198 TP53AIP1Q9HCN2 124 aa7.8□□□□□ -1.16
C9orf3-201ENST00000277198 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
C9orf3-201ENST00000277198 V9GYY9 64 aa7.8□□□□□ -1.16
C9orf3-201ENST00000277198 Q96NJ1 140 aa7.79□□□□□ -1.16
C9orf3-201ENST00000277198 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
C9orf3-201ENST00000277198 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
C9orf3-201ENST00000277198 BRK1Q8WUW1 75 aa7.77□□□□□ -1.17
C9orf3-201ENST00000277198 IGLV9-49A0A0B4J1Y8 123 aa7.77□□□□□ -1.17
C9orf3-201ENST00000277198 IGLV5-52A0A0A0MRZ9 124 aa7.76□□□□□ -1.17
C9orf3-201ENST00000277198 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
C9orf3-201ENST00000277198 PRR4Q16378 134 aa7.75□□□□□ -1.17
C9orf3-201ENST00000277198 ZNF861PO60384 105 aa7.74□□□□□ -1.17
C9orf3-201ENST00000277198 CDK2AP2O75956 126 aa7.74□□□□□ -1.17
C9orf3-201ENST00000277198 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
C9orf3-201ENST00000277198 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
C9orf3-201ENST00000277198 IGLV7-46A0A075B6I9 117 aa7.72□□□□□ -1.17
C9orf3-201ENST00000277198 A0A1B0GVX0 72 aa7.72□□□□□ -1.17
C9orf3-201ENST00000277198 C1orf195Q5TG92 126 aa7.72□□□□□ -1.17
C9orf3-201ENST00000277198 FAT1Q14517 4588 aa7.72□□□□□ -1.17
C9orf3-201ENST00000277198 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
C9orf3-201ENST00000277198 LIMD2Q9BT23 127 aa7.68□□□□□ -1.18
C9orf3-201ENST00000277198 DNAH8Q96JB1 4490 aa7.67□□□□□ -1.18
C9orf3-201ENST00000277198 MRPL34Q9BQ48 92 aaKnown RBP7.67□□□□□ -1.18
C9orf3-201ENST00000277198 IGHV6-1A0A0B4J1U7 121 aa7.66□□□□□ -1.18
C9orf3-201ENST00000277198 Q8N1X5 172 aa7.66□□□□□ -1.18
C9orf3-201ENST00000277198 SMR3BP02814 79 aaPredicted RBP7.65□□□□□ -1.18
C9orf3-201ENST00000277198 CD164Q04900 197 aa7.65□□□□□ -1.18
C9orf3-201ENST00000277198 PSPHP1O15172 72 aa7.64□□□□□ -1.19
C9orf3-201ENST00000277198 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
C9orf3-201ENST00000277198 IGLV7-43P04211 117 aa7.63□□□□□ -1.19
C9orf3-201ENST00000277198 COA5Q86WW8 74 aa7.62□□□□□ -1.19
C9orf3-201ENST00000277198 NDUFS5O43920 106 aa7.61□□□□□ -1.19
C9orf3-201ENST00000277198 SSBP3-AS1Q7Z2R9 100 aa7.61□□□□□ -1.19
C9orf3-201ENST00000277198 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
C9orf3-201ENST00000277198 A8MUN3 132 aa7.6□□□□□ -1.19
C9orf3-201ENST00000277198 Q6ZSA8 131 aa7.6□□□□□ -1.19
C9orf3-201ENST00000277198 Q5VV11 94 aa7.59□□□□□ -1.19
C9orf3-201ENST00000277198 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
C9orf3-201ENST00000277198 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.2
C9orf3-201ENST00000277198 PCOTHQ58A44 107 aa7.59□□□□□ -1.2
C9orf3-201ENST00000277198 Q5VSD8 79 aa7.59□□□□□ -1.2
C9orf3-201ENST00000277198 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
C9orf3-201ENST00000277198 C8orf87E5RJ46 101 aa7.57□□□□□ -1.2
C9orf3-201ENST00000277198 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
C9orf3-201ENST00000277198 A0A087X002 238 aa7.55□□□□□ -1.2
C9orf3-201ENST00000277198 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
C9orf3-201ENST00000277198 Q75L30 129 aa7.53□□□□□ -1.2
C9orf3-201ENST00000277198 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
C9orf3-201ENST00000277198 CIRBP-AS1Q8TBR5 109 aa7.53□□□□□ -1.2
C9orf3-201ENST00000277198 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
C9orf3-201ENST00000277198 CHKB-CPT1BH3BT56 60 aa7.51□□□□□ -1.21
C9orf3-201ENST00000277198 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
C9orf3-201ENST00000277198 SPINK6Q6UWN8 80 aa7.51□□□□□ -1.21
C9orf3-201ENST00000277198 FAM229AH3BQW9 127 aa7.49□□□□□ -1.21
C9orf3-201ENST00000277198 HRES1P13985 223 aa7.49□□□□□ -1.21
C9orf3-201ENST00000277198 Q5W150 140 aa7.48□□□□□ -1.21
C9orf3-201ENST00000277198 HERC1Q15751 4861 aa7.47□□□□□ -1.21
C9orf3-201ENST00000277198 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.21
C9orf3-201ENST00000277198 LINC00313P59037 77 aa7.45□□□□□ -1.22
C9orf3-201ENST00000277198 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
C9orf3-201ENST00000277198 LRP1Q07954 4544 aaKnown RBP7.44□□□□□ -1.22
C9orf3-201ENST00000277198 ACYP2P14621 99 aa7.43□□□□□ -1.22
C9orf3-201ENST00000277198 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
C9orf3-201ENST00000277198 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
C9orf3-201ENST00000277198 A6NED7 52 aa7.42□□□□□ -1.22
C9orf3-201ENST00000277198 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
C9orf3-201ENST00000277198 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
C9orf3-201ENST00000277198 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.23
C9orf3-201ENST00000277198 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.23
C9orf3-201ENST00000277198 LCA10Q71F78 164 aa7.39□□□□□ -1.23
C9orf3-201ENST00000277198 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
C9orf3-201ENST00000277198 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
C9orf3-201ENST00000277198 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
C9orf3-201ENST00000277198 A8MU10 97 aa7.36□□□□□ -1.23
C9orf3-201ENST00000277198 IGKV2-30P06310 120 aa7.36□□□□□ -1.23
C9orf3-201ENST00000277198 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
C9orf3-201ENST00000277198 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
C9orf3-201ENST00000277198 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
C9orf3-201ENST00000277198 SPINK1P00995 79 aa7.29□□□□□ -1.24
C9orf3-201ENST00000277198 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
C9orf3-201ENST00000277198 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
C9orf3-201ENST00000277198 J3QL48 77 aa7.29□□□□□ -1.24
C9orf3-201ENST00000277198 SPINK7P58062 85 aa7.27□□□□□ -1.25
C9orf3-201ENST00000277198 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
C9orf3-201ENST00000277198 A6NN06 94 aa7.26□□□□□ -1.25
C9orf3-201ENST00000277198 KTN1-AS1Q86SY8 53 aa7.26□□□□□ -1.25
C9orf3-201ENST00000277198 TYMSOSQ8TAI1 123 aa7.25□□□□□ -1.25
C9orf3-201ENST00000277198 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
C9orf3-201ENST00000277198 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
C9orf3-201ENST00000277198 SEC61GP60059 68 aa7.21□□□□□ -1.26
C9orf3-201ENST00000277198 TNXBP22105 4242 aa7.21□□□□□ -1.26
C9orf3-201ENST00000277198 A0A1B0GU69 56 aa7.2□□□□□ -1.26
C9orf3-201ENST00000277198 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
C9orf3-201ENST00000277198 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
C9orf3-201ENST00000277198 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
C9orf3-201ENST00000277198 C7orf65Q6ZTY9 151 aa7.15□□□□□ -1.26
C9orf3-201ENST00000277198 SPATA8Q6RVD6 105 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms