RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
SDE2-201ENST00000272091 TNXBP22105 4242 aa6.92□□□□□ -1.3
SDE2-201ENST00000272091 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
SDE2-201ENST00000272091 C4orf26Q17RF5 130 aa6.92□□□□□ -1.3
SDE2-201ENST00000272091 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
SDE2-201ENST00000272091 TMEM258P61165 79 aa6.92□□□□□ -1.3
SDE2-201ENST00000272091 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.3
SDE2-201ENST00000272091 CASC2Q6XLA1 102 aa6.9□□□□□ -1.3
SDE2-201ENST00000272091 IGHV6-1A0A0B4J1U7 121 aa6.9□□□□□ -1.3
SDE2-201ENST00000272091 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
SDE2-201ENST00000272091 NDUFB1O75438 58 aa6.9□□□□□ -1.31
SDE2-201ENST00000272091 KLKP1Q107X0 134 aa6.9□□□□□ -1.31
SDE2-201ENST00000272091 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.31
SDE2-201ENST00000272091 SPINK1P00995 79 aa6.89□□□□□ -1.31
SDE2-201ENST00000272091 FAT3Q8TDW7 4589 aa6.88□□□□□ -1.31
SDE2-201ENST00000272091 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
SDE2-201ENST00000272091 LIMD2Q9BT23 127 aa6.87□□□□□ -1.31
SDE2-201ENST00000272091 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
SDE2-201ENST00000272091 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
SDE2-201ENST00000272091 C4orf48Q5BLP8 95 aa6.86□□□□□ -1.31
SDE2-201ENST00000272091 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
SDE2-201ENST00000272091 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
SDE2-201ENST00000272091 SPAG11AQ6PDA7 123 aa6.84□□□□□ -1.32
SDE2-201ENST00000272091 Q8N1X5 172 aa6.83□□□□□ -1.32
SDE2-201ENST00000272091 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
SDE2-201ENST00000272091 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
SDE2-201ENST00000272091 A0A0U1RQV1 116 aa6.81□□□□□ -1.32
SDE2-201ENST00000272091 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
SDE2-201ENST00000272091 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
SDE2-201ENST00000272091 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
SDE2-201ENST00000272091 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
SDE2-201ENST00000272091 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.32
SDE2-201ENST00000272091 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
SDE2-201ENST00000272091 LINC00313P59037 77 aa6.76□□□□□ -1.33
SDE2-201ENST00000272091 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
SDE2-201ENST00000272091 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
SDE2-201ENST00000272091 FAM236DA0A1B0GTK5 79 aa6.75□□□□□ -1.33
SDE2-201ENST00000272091 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
SDE2-201ENST00000272091 FAM236CP0DP71 79 aa6.75□□□□□ -1.33
SDE2-201ENST00000272091 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
SDE2-201ENST00000272091 H0Y9P7 68 aa6.73□□□□□ -1.33
SDE2-201ENST00000272091 NDUFS5O43920 106 aa6.72□□□□□ -1.33
SDE2-201ENST00000272091 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
SDE2-201ENST00000272091 Q8N9P0 234 aaPredicted RBP6.72□□□□□ -1.33
SDE2-201ENST00000272091 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
SDE2-201ENST00000272091 Q5W150 140 aa6.71□□□□□ -1.33
SDE2-201ENST00000272091 TRAV22A0A0B4J277 110 aa6.71□□□□□ -1.34
SDE2-201ENST00000272091 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
SDE2-201ENST00000272091 LINC00208Q96KT6 92 aa6.69□□□□□ -1.34
SDE2-201ENST00000272091 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
SDE2-201ENST00000272091 MP68P56378 58 aa6.68□□□□□ -1.34
SDE2-201ENST00000272091 NDUFC1O43677 76 aa6.67□□□□□ -1.34
SDE2-201ENST00000272091 H3BPC8 53 aa6.66□□□□□ -1.34
SDE2-201ENST00000272091 C1orf64Q8NEQ6 169 aa6.66□□□□□ -1.34
SDE2-201ENST00000272091 ABCA13Q86UQ4 5058 aa6.66□□□□□ -1.34
SDE2-201ENST00000272091 HERC2O95714 4834 aa6.65□□□□□ -1.34
SDE2-201ENST00000272091 C9orf92A6NGG3 77 aa6.65□□□□□ -1.35
SDE2-201ENST00000272091 C20orf166-AS1Q96NR2 134 aa6.59□□□□□ -1.35
SDE2-201ENST00000272091 A8MUU9 505 aa6.58□□□□□ -1.36
SDE2-201ENST00000272091 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
SDE2-201ENST00000272091 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
SDE2-201ENST00000272091 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
SDE2-201ENST00000272091 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
SDE2-201ENST00000272091 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
SDE2-201ENST00000272091 A8MU10 97 aa6.54□□□□□ -1.36
SDE2-201ENST00000272091 IGKV2-30P06310 120 aa6.54□□□□□ -1.36
SDE2-201ENST00000272091 ATP5EP56381 51 aaPredicted RBP6.54□□□□□ -1.36
SDE2-201ENST00000272091 PRR4Q16378 134 aa6.53□□□□□ -1.36
SDE2-201ENST00000272091 IGLV7-46A0A075B6I9 117 aa6.52□□□□□ -1.37
SDE2-201ENST00000272091 SPANXA2-OT1Q8N9U9 137 aa6.52□□□□□ -1.37
SDE2-201ENST00000272091 Q75L30 129 aa6.5□□□□□ -1.37
SDE2-201ENST00000272091 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
SDE2-201ENST00000272091 XP32Q5T750 250 aa6.48□□□□□ -1.37
SDE2-201ENST00000272091 MPLKIPQ8TAP9 179 aa6.48□□□□□ -1.37
SDE2-201ENST00000272091 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.37
SDE2-201ENST00000272091 HRES1P13985 223 aa6.46□□□□□ -1.38
SDE2-201ENST00000272091 Q1T7F1 81 aa6.46□□□□□ -1.38
SDE2-201ENST00000272091 LPAP08519 4548 aa6.45□□□□□ -1.38
SDE2-201ENST00000272091 RPL37P61927 97 aaKnown RBP6.43□□□□□ -1.38
SDE2-201ENST00000272091 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
SDE2-201ENST00000272091 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
SDE2-201ENST00000272091 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.39
SDE2-201ENST00000272091 J3QL48 77 aa6.39□□□□□ -1.39
SDE2-201ENST00000272091 LRP2P98164 4655 aa6.38□□□□□ -1.39
SDE2-201ENST00000272091 Q5VV11 94 aa6.37□□□□□ -1.39
SDE2-201ENST00000272091 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
SDE2-201ENST00000272091 SPINK7P58062 85 aa6.36□□□□□ -1.39
SDE2-201ENST00000272091 COA5Q86WW8 74 aa6.36□□□□□ -1.39
SDE2-201ENST00000272091 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
SDE2-201ENST00000272091 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
SDE2-201ENST00000272091 PSPHP1O15172 72 aa6.32□□□□□ -1.4
SDE2-201ENST00000272091 A8MUN3 132 aa6.31□□□□□ -1.4
SDE2-201ENST00000272091 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
SDE2-201ENST00000272091 ACYP2P14621 99 aa6.28□□□□□ -1.4
SDE2-201ENST00000272091 LCA10Q71F78 164 aa6.27□□□□□ -1.41
SDE2-201ENST00000272091 HERC1Q15751 4861 aa6.24□□□□□ -1.41
SDE2-201ENST00000272091 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
SDE2-201ENST00000272091 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
SDE2-201ENST00000272091 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
SDE2-201ENST00000272091 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms