RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 LINC00336Q6ZUF6 198 aa13.47□□□□□ -0.25
RAB40B-201ENST00000269347 SSBP3-AS1Q7Z2R9 100 aa13.45□□□□□ -0.26
RAB40B-201ENST00000269347 SPINK6Q6UWN8 80 aa13.43□□□□□ -0.26
RAB40B-201ENST00000269347 IGHV6-1A0A0B4J1U7 121 aa13.41□□□□□ -0.26
RAB40B-201ENST00000269347 H0Y9P7 68 aa13.4□□□□□ -0.26
RAB40B-201ENST00000269347 ASB16-AS1Q495Z4 193 aa13.4□□□□□ -0.26
RAB40B-201ENST00000269347 FP248Q71RG6 208 aaPredicted RBP13.4□□□□□ -0.26
RAB40B-201ENST00000269347 LINC00208Q96KT6 92 aa13.4□□□□□ -0.26
RAB40B-201ENST00000269347 A0A1B0GVX0 72 aa13.39□□□□□ -0.27
RAB40B-201ENST00000269347 hDV103S1A0JD37 113 aa13.39□□□□□ -0.27
RAB40B-201ENST00000269347 C8orf17Q9NRJ1 99 aa13.39□□□□□ -0.27
RAB40B-201ENST00000269347 CD164Q04900 197 aa13.38□□□□□ -0.27
RAB40B-201ENST00000269347 FAM229BQ4G0N7 80 aa13.37□□□□□ -0.27
RAB40B-201ENST00000269347 TRAV22A0A0B4J277 110 aa13.36□□□□□ -0.27
RAB40B-201ENST00000269347 H3BPC8 53 aa13.35□□□□□ -0.27
RAB40B-201ENST00000269347 KRTAP10-4P60372 401 aaPredicted RBP13.34□□□□□ -0.27
RAB40B-201ENST00000269347 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
RAB40B-201ENST00000269347 CDK2AP2O75956 126 aa13.31□□□□□ -0.28
RAB40B-201ENST00000269347 PKHD1L1Q86WI1 4243 aa13.3□□□□□ -0.28
RAB40B-201ENST00000269347 PRR4Q16378 134 aa13.29□□□□□ -0.28
RAB40B-201ENST00000269347 C1orf64Q8NEQ6 169 aa13.29□□□□□ -0.28
RAB40B-201ENST00000269347 CYP4F30PQ9H0H9 118 aa13.28□□□□□ -0.28
RAB40B-201ENST00000269347 C1orf195Q5TG92 126 aa13.27□□□□□ -0.29
RAB40B-201ENST00000269347 PRR26Q8N8Z3 221 aa13.26□□□□□ -0.29
RAB40B-201ENST00000269347 HSPG2P98160 4391 aa13.24□□□□□ -0.29
RAB40B-201ENST00000269347 TP53AIP1Q9HCN2 124 aa13.24□□□□□ -0.29
RAB40B-201ENST00000269347 TYMSOSQ8TAI1 123 aa13.22□□□□□ -0.29
RAB40B-201ENST00000269347 MPLKIPQ8TAP9 179 aa13.22□□□□□ -0.29
RAB40B-201ENST00000269347 MRPL34Q9BQ48 92 aaKnown RBP13.2□□□□□ -0.3
RAB40B-201ENST00000269347 NDUFS5O43920 106 aa13.19□□□□□ -0.3
RAB40B-201ENST00000269347 SPANXA2-OT1Q8N9U9 137 aa13.19□□□□□ -0.3
RAB40B-201ENST00000269347 LRP1Q07954 4544 aaKnown RBP13.15□□□□□ -0.3
RAB40B-201ENST00000269347 RYR1P21817 5038 aa13.11□□□□□ -0.31
RAB40B-201ENST00000269347 Q5W150 140 aa13.11□□□□□ -0.31
RAB40B-201ENST00000269347 KRTAP17-1Q9BYP8 105 aa13.08□□□□□ -0.31
RAB40B-201ENST00000269347 PCOTHQ58A44 107 aa13.05□□□□□ -0.32
RAB40B-201ENST00000269347 KRTAP13-3Q3SY46 172 aa13.05□□□□□ -0.32
RAB40B-201ENST00000269347 KRTAP16-1A8MUX0 517 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 LINC00304Q8N9R0 145 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 LIMD2Q9BT23 127 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 TNXBP22105 4242 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 SPINK1P00995 79 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 LINC00313P59037 77 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 C4orf48Q5BLP8 95 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 KIAA1109Q2LD37 5005 aa13.04□□□□□ -0.32
RAB40B-201ENST00000269347 EPPK1P58107 5090 aaKnown RBP13.03□□□□□ -0.32
RAB40B-201ENST00000269347 Q1T7F1 81 aa13.03□□□□□ -0.32
RAB40B-201ENST00000269347 IGLV7-46A0A075B6I9 117 aa13.02□□□□□ -0.33
RAB40B-201ENST00000269347 C8orf87E5RJ46 101 aa13.01□□□□□ -0.33
RAB40B-201ENST00000269347 Q8N9P0 234 aaPredicted RBP12.96□□□□□ -0.34
RAB40B-201ENST00000269347 RETNLBQ9BQ08 111 aa12.96□□□□□ -0.34
RAB40B-201ENST00000269347 PRO0628Q9UI54 55 aa12.92□□□□□ -0.34
RAB40B-201ENST00000269347 FAT3Q8TDW7 4589 aa12.91□□□□□ -0.34
RAB40B-201ENST00000269347 LOC101927531A0A1B0GV80 90 aa12.9□□□□□ -0.34
RAB40B-201ENST00000269347 COA5Q86WW8 74 aa12.9□□□□□ -0.34
RAB40B-201ENST00000269347 BRK1Q8WUW1 75 aa12.9□□□□□ -0.34
RAB40B-201ENST00000269347 V9GYY9 64 aa12.89□□□□□ -0.35
RAB40B-201ENST00000269347 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-201ENST00000269347 RPS29P62273 56 aaKnown RBP12.87□□□□□ -0.35
RAB40B-201ENST00000269347 PSPHP1O15172 72 aa12.87□□□□□ -0.35
RAB40B-201ENST00000269347 Q5VSD8 79 aa12.86□□□□□ -0.35
RAB40B-201ENST00000269347 SPAG11AQ6PDA7 123 aa12.86□□□□□ -0.35
RAB40B-201ENST00000269347 MYCBP2O75592 4640 aa12.84□□□□□ -0.35
RAB40B-201ENST00000269347 FAM229AH3BQW9 127 aa12.8□□□□□ -0.36
RAB40B-201ENST00000269347 Q8N1X5 172 aa12.79□□□□□ -0.36
RAB40B-201ENST00000269347 A8MUN3 132 aa12.78□□□□□ -0.36
RAB40B-201ENST00000269347 C9orf92A6NGG3 77 aa12.74□□□□□ -0.37
RAB40B-201ENST00000269347 HRES1P13985 223 aa12.73□□□□□ -0.37
RAB40B-201ENST00000269347 KRTAP10-8P60410 259 aa12.71□□□□□ -0.37
RAB40B-201ENST00000269347 Q5VV11 94 aa12.69□□□□□ -0.38
RAB40B-201ENST00000269347 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
RAB40B-201ENST00000269347 PRR15LQ9BU68 103 aa12.68□□□□□ -0.38
RAB40B-201ENST00000269347 DMBT1Q9UGM3 2413 aaPredicted RBP12.65□□□□□ -0.39
RAB40B-201ENST00000269347 IGKV2D-30A0A075B6S6 120 aa12.6□□□□□ -0.39
RAB40B-201ENST00000269347 CHKB-CPT1BH3BT56 60 aa12.59□□□□□ -0.39
RAB40B-201ENST00000269347 ACYP2P14621 99 aa12.59□□□□□ -0.39
RAB40B-201ENST00000269347 LINC01558Q9Y6Z2 57 aa12.56□□□□□ -0.4
RAB40B-201ENST00000269347 DMAC1Q96GE9 116 aa12.55□□□□□ -0.4
RAB40B-201ENST00000269347 Q75L30 129 aa12.54□□□□□ -0.4
RAB40B-201ENST00000269347 C20orf166-AS1Q96NR2 134 aa12.54□□□□□ -0.4
RAB40B-201ENST00000269347 A8MUU9 505 aa12.53□□□□□ -0.4
RAB40B-201ENST00000269347 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
RAB40B-201ENST00000269347 KRTAP4-5Q9BYR2 181 aa12.47□□□□□ -0.41
RAB40B-201ENST00000269347 A6NED7 52 aa12.43□□□□□ -0.42
RAB40B-201ENST00000269347 ABCA13Q86UQ4 5058 aa12.42□□□□□ -0.42
RAB40B-201ENST00000269347 A8MU10 97 aa12.41□□□□□ -0.42
RAB40B-201ENST00000269347 C7orf65Q6ZTY9 151 aa12.37□□□□□ -0.43
RAB40B-201ENST00000269347 LCA10Q71F78 164 aa12.32□□□□□ -0.44
RAB40B-201ENST00000269347 LPAP08519 4548 aa12.27□□□□□ -0.44
RAB40B-201ENST00000269347 SPINK7P58062 85 aa12.27□□□□□ -0.45
RAB40B-201ENST00000269347 CDC42SE1Q9NRR8 79 aa12.27□□□□□ -0.45
RAB40B-201ENST00000269347 LRP2P98164 4655 aa12.24□□□□□ -0.45
RAB40B-201ENST00000269347 XP32Q5T750 250 aa12.23□□□□□ -0.45
RAB40B-201ENST00000269347 KRTAP3-1Q9BYR8 98 aa12.23□□□□□ -0.45
RAB40B-201ENST00000269347 SPTSSBQ8NFR3 76 aa12.21□□□□□ -0.45
RAB40B-201ENST00000269347 ATP11AUNQ6ZP68 121 aa12.19□□□□□ -0.46
RAB40B-201ENST00000269347 A0A1B0GU69 56 aa12.18□□□□□ -0.46
RAB40B-201ENST00000269347 PMAIP1Q13794 54 aa12.18□□□□□ -0.46
RAB40B-201ENST00000269347 HERC2O95714 4834 aa12.17□□□□□ -0.46
RAB40B-201ENST00000269347 RPL37P61927 97 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms