RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 SPANXA2-OT1Q8N9U9 137 aa11.37□□□□□ -0.59
CPNE7-201ENST00000268720 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
CPNE7-201ENST00000268720 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
CPNE7-201ENST00000268720 Q5VV11 94 aa11.32□□□□□ -0.6
CPNE7-201ENST00000268720 Q8N9P0 234 aaPredicted RBP11.32□□□□□ -0.6
CPNE7-201ENST00000268720 CIRBP-AS1Q8TBR5 109 aa11.32□□□□□ -0.6
CPNE7-201ENST00000268720 KRTAP10-2P60368 255 aa11.32□□□□□ -0.6
CPNE7-201ENST00000268720 ZNF706Q9Y5V0 76 aaPredicted RBP11.32□□□□□ -0.6
CPNE7-201ENST00000268720 CD164Q04900 197 aa11.31□□□□□ -0.6
CPNE7-201ENST00000268720 COA5Q86WW8 74 aa11.3□□□□□ -0.6
CPNE7-201ENST00000268720 RETNLBQ9BQ08 111 aa11.29□□□□□ -0.6
CPNE7-201ENST00000268720 PRR15LQ9BU68 103 aa11.29□□□□□ -0.6
CPNE7-201ENST00000268720 FAT2Q9NYQ8 4349 aa11.28□□□□□ -0.6
CPNE7-201ENST00000268720 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
CPNE7-201ENST00000268720 CHKB-CPT1BH3BT56 60 aa11.26□□□□□ -0.61
CPNE7-201ENST00000268720 ASB16-AS1Q495Z4 193 aa11.26□□□□□ -0.61
CPNE7-201ENST00000268720 V9GYY9 64 aa11.26□□□□□ -0.61
CPNE7-201ENST00000268720 A0A1B0GVX0 72 aa11.26□□□□□ -0.61
CPNE7-201ENST00000268720 IGLV7-43P04211 117 aa11.26□□□□□ -0.61
CPNE7-201ENST00000268720 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
CPNE7-201ENST00000268720 PKD1P98161 4303 aa11.22□□□□□ -0.61
CPNE7-201ENST00000268720 TP53AIP1Q9HCN2 124 aa11.22□□□□□ -0.61
CPNE7-201ENST00000268720 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
CPNE7-201ENST00000268720 MRPL34Q9BQ48 92 aaKnown RBP11.19□□□□□ -0.62
CPNE7-201ENST00000268720 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
CPNE7-201ENST00000268720 Q5W150 140 aa11.17□□□□□ -0.62
CPNE7-201ENST00000268720 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
CPNE7-201ENST00000268720 PKHD1P08F94 4074 aa11.16□□□□□ -0.62
CPNE7-201ENST00000268720 KRTAP10-1P60331 282 aa11.13□□□□□ -0.63
CPNE7-201ENST00000268720 HRES1P13985 223 aa11.11□□□□□ -0.63
CPNE7-201ENST00000268720 A6NED7 52 aa11.1□□□□□ -0.63
CPNE7-201ENST00000268720 PMAIP1Q13794 54 aa11.1□□□□□ -0.63
CPNE7-201ENST00000268720 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
CPNE7-201ENST00000268720 LCA10Q71F78 164 aa11.1□□□□□ -0.63
CPNE7-201ENST00000268720 Q6ZSA8 131 aa11.07□□□□□ -0.64
CPNE7-201ENST00000268720 Q75L30 129 aa11.06□□□□□ -0.64
CPNE7-201ENST00000268720 LOC101927531A0A1B0GV80 90 aa11.04□□□□□ -0.64
CPNE7-201ENST00000268720 KRTAP13-2Q52LG2 175 aa11.03□□□□□ -0.64
CPNE7-201ENST00000268720 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.64
CPNE7-201ENST00000268720 SSBP3-AS1Q7Z2R9 100 aa11.02□□□□□ -0.65
CPNE7-201ENST00000268720 LINC01558Q9Y6Z2 57 aa10.99□□□□□ -0.65
CPNE7-201ENST00000268720 KRTAP13-3Q3SY46 172 aa10.97□□□□□ -0.65
CPNE7-201ENST00000268720 SPINK7P58062 85 aa10.96□□□□□ -0.65
CPNE7-201ENST00000268720 SACSQ9NZJ4 4579 aa10.96□□□□□ -0.66
CPNE7-201ENST00000268720 FAT1Q14517 4588 aa10.94□□□□□ -0.66
CPNE7-201ENST00000268720 SEC61GP60059 68 aa10.94□□□□□ -0.66
CPNE7-201ENST00000268720 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
CPNE7-201ENST00000268720 CDC42SE1Q9NRR8 79 aa10.88□□□□□ -0.67
CPNE7-201ENST00000268720 ATP11AUNQ6ZP68 121 aa10.88□□□□□ -0.67
CPNE7-201ENST00000268720 LINC00313P59037 77 aa10.87□□□□□ -0.67
CPNE7-201ENST00000268720 C8orf87E5RJ46 101 aa10.84□□□□□ -0.67
CPNE7-201ENST00000268720 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
CPNE7-201ENST00000268720 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
CPNE7-201ENST00000268720 PLA2G1BP04054 148 aaKnown RBP10.82□□□□□ -0.68
CPNE7-201ENST00000268720 SMR3BP02814 79 aaPredicted RBP10.82□□□□□ -0.68
CPNE7-201ENST00000268720 ACYP2P14621 99 aa10.82□□□□□ -0.68
CPNE7-201ENST00000268720 KRTAP21-3Q3LHN1 58 aa10.81□□□□□ -0.68
CPNE7-201ENST00000268720 DYNC1H1Q14204 4646 aaKnown RBP10.8□□□□□ -0.68
CPNE7-201ENST00000268720 A6NN06 94 aa10.8□□□□□ -0.68
CPNE7-201ENST00000268720 KTN1-AS1Q86SY8 53 aa10.77□□□□□ -0.69
CPNE7-201ENST00000268720 FAM229AH3BQW9 127 aa10.77□□□□□ -0.69
CPNE7-201ENST00000268720 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
CPNE7-201ENST00000268720 TYMSOSQ8TAI1 123 aa10.74□□□□□ -0.69
CPNE7-201ENST00000268720 KRTAP16-1A8MUX0 517 aa10.72□□□□□ -0.69
CPNE7-201ENST00000268720 C4orf48Q5BLP8 95 aa10.69□□□□□ -0.7
CPNE7-201ENST00000268720 SPINK1P00995 79 aa10.68□□□□□ -0.7
CPNE7-201ENST00000268720 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.7
CPNE7-201ENST00000268720 KMT2CQ8NEZ4 4911 aaKnown RBP10.65□□□□□ -0.7
CPNE7-201ENST00000268720 Q8N1X5 172 aa10.65□□□□□ -0.7
CPNE7-201ENST00000268720 C9orf92A6NGG3 77 aa10.64□□□□□ -0.71
CPNE7-201ENST00000268720 A0A1B0GU69 56 aa10.63□□□□□ -0.71
CPNE7-201ENST00000268720 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
CPNE7-201ENST00000268720 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
CPNE7-201ENST00000268720 C7orf65Q6ZTY9 151 aa10.59□□□□□ -0.71
CPNE7-201ENST00000268720 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
CPNE7-201ENST00000268720 RYR2Q92736 4967 aa10.57□□□□□ -0.72
CPNE7-201ENST00000268720 LRP1Q07954 4544 aaKnown RBP10.56□□□□□ -0.72
CPNE7-201ENST00000268720 MYCBP2O75592 4640 aa10.53□□□□□ -0.72
CPNE7-201ENST00000268720 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.72
CPNE7-201ENST00000268720 PRAC1Q96KF2 57 aa10.5□□□□□ -0.73
CPNE7-201ENST00000268720 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
CPNE7-201ENST00000268720 PKHD1L1Q86WI1 4243 aa10.46□□□□□ -0.74
CPNE7-201ENST00000268720 RPS29P62273 56 aaKnown RBP10.44□□□□□ -0.74
CPNE7-201ENST00000268720 MIR22HGQ0VDD5 57 aa10.44□□□□□ -0.74
CPNE7-201ENST00000268720 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
CPNE7-201ENST00000268720 FLG2Q5D862 2391 aaPredicted RBP10.43□□□□□ -0.74
CPNE7-201ENST00000268720 UQCR11O14957 56 aa10.41□□□□□ -0.74
CPNE7-201ENST00000268720 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
CPNE7-201ENST00000268720 HSPG2P98160 4391 aa10.32□□□□□ -0.76
CPNE7-201ENST00000268720 RYR3Q15413 4870 aa10.29□□□□□ -0.76
CPNE7-201ENST00000268720 C20orf166-AS1Q96NR2 134 aa10.26□□□□□ -0.77
CPNE7-201ENST00000268720 A8MUU9 505 aa10.25□□□□□ -0.77
CPNE7-201ENST00000268720 KRTAP3-1Q9BYR8 98 aa10.22□□□□□ -0.77
CPNE7-201ENST00000268720 FAT3Q8TDW7 4589 aa10.21□□□□□ -0.77
CPNE7-201ENST00000268720 TNXBP22105 4242 aa10.21□□□□□ -0.78
CPNE7-201ENST00000268720 LPAP08519 4548 aa10.16□□□□□ -0.78
CPNE7-201ENST00000268720 H0YAA0 97 aa10.12□□□□□ -0.79
CPNE7-201ENST00000268720 Q5VSD8 79 aa10.12□□□□□ -0.79
CPNE7-201ENST00000268720 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
CPNE7-201ENST00000268720 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms