RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 SERP1Q9Y6X1 66 aa10.86□□□□□ -0.67
SMARCC2-201ENST00000267064 C1orf195Q5TG92 126 aa10.85□□□□□ -0.67
SMARCC2-201ENST00000267064 DNAH17Q9UFH2 4485 aa10.84□□□□□ -0.67
SMARCC2-201ENST00000267064 HYDINQ4G0P3 5121 aa10.83□□□□□ -0.68
SMARCC2-201ENST00000267064 C9orf92A6NGG3 77 aa10.83□□□□□ -0.68
SMARCC2-201ENST00000267064 KRTAP1-4P0C5Y4 121 aa10.83□□□□□ -0.68
SMARCC2-201ENST00000267064 ATP5EP56381 51 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-201ENST00000267064 SPINK1P00995 79 aa10.82□□□□□ -0.68
SMARCC2-201ENST00000267064 IGKV2D-30A0A075B6S6 120 aa10.81□□□□□ -0.68
SMARCC2-201ENST00000267064 IGKV2-30P06310 120 aa10.81□□□□□ -0.68
SMARCC2-201ENST00000267064 C8orf87E5RJ46 101 aa10.79□□□□□ -0.68
SMARCC2-201ENST00000267064 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.69
SMARCC2-201ENST00000267064 RPS28P62857 69 aaKnown RBP10.74□□□□□ -0.69
SMARCC2-201ENST00000267064 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
SMARCC2-201ENST00000267064 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
SMARCC2-201ENST00000267064 Q5VSD8 79 aa10.73□□□□□ -0.69
SMARCC2-201ENST00000267064 SPAG11AQ6PDA7 123 aa10.73□□□□□ -0.69
SMARCC2-201ENST00000267064 H3BPC8 53 aa10.72□□□□□ -0.69
SMARCC2-201ENST00000267064 OXTP01178 125 aa10.72□□□□□ -0.69
SMARCC2-201ENST00000267064 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.69
SMARCC2-201ENST00000267064 SMIM26A0A096LP01 95 aa10.71□□□□□ -0.69
SMARCC2-201ENST00000267064 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
SMARCC2-201ENST00000267064 C4orf26Q17RF5 130 aa10.67□□□□□ -0.7
SMARCC2-201ENST00000267064 DNAH5Q8TE73 4624 aa10.67□□□□□ -0.7
SMARCC2-201ENST00000267064 ALMS1Q8TCU4 4167 aa10.66□□□□□ -0.7
SMARCC2-201ENST00000267064 DNAH8Q96JB1 4490 aa10.66□□□□□ -0.7
SMARCC2-201ENST00000267064 CHKB-CPT1BH3BT56 60 aa10.66□□□□□ -0.7
SMARCC2-201ENST00000267064 Q5W150 140 aa10.66□□□□□ -0.7
SMARCC2-201ENST00000267064 ZCCHC13Q8WW36 166 aaKnown RBP10.64□□□□□ -0.71
SMARCC2-201ENST00000267064 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
SMARCC2-201ENST00000267064 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-201ENST00000267064 PSPHP1O15172 72 aa10.59□□□□□ -0.71
SMARCC2-201ENST00000267064 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
SMARCC2-201ENST00000267064 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
SMARCC2-201ENST00000267064 FAT1Q14517 4588 aa10.57□□□□□ -0.72
SMARCC2-201ENST00000267064 DYNC1H1Q14204 4646 aaKnown RBP10.54□□□□□ -0.72
SMARCC2-201ENST00000267064 PKHD1P08F94 4074 aa10.53□□□□□ -0.72
SMARCC2-201ENST00000267064 COA5Q86WW8 74 aa10.53□□□□□ -0.72
SMARCC2-201ENST00000267064 Q5XG85 94 aa10.51□□□□□ -0.73
SMARCC2-201ENST00000267064 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
SMARCC2-201ENST00000267064 BRK1Q8WUW1 75 aa10.49□□□□□ -0.73
SMARCC2-201ENST00000267064 KMT2CQ8NEZ4 4911 aaKnown RBP10.49□□□□□ -0.73
SMARCC2-201ENST00000267064 SPANXA2-OT1Q8N9U9 137 aa10.48□□□□□ -0.73
SMARCC2-201ENST00000267064 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
SMARCC2-201ENST00000267064 HRES1P13985 223 aa10.47□□□□□ -0.73
SMARCC2-201ENST00000267064 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.73
SMARCC2-201ENST00000267064 FAT2Q9NYQ8 4349 aa10.46□□□□□ -0.74
SMARCC2-201ENST00000267064 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.74
SMARCC2-201ENST00000267064 Q8N1X5 172 aa10.45□□□□□ -0.74
SMARCC2-201ENST00000267064 PRR15LQ9BU68 103 aa10.44□□□□□ -0.74
SMARCC2-201ENST00000267064 VPS13BQ7Z7G8 4022 aa10.44□□□□□ -0.74
SMARCC2-201ENST00000267064 ACYP2P14621 99 aa10.41□□□□□ -0.74
SMARCC2-201ENST00000267064 A8MUN3 132 aa10.38□□□□□ -0.75
SMARCC2-201ENST00000267064 ATP11AUNQ6ZP68 121 aa10.36□□□□□ -0.75
SMARCC2-201ENST00000267064 PKD1P98161 4303 aa10.35□□□□□ -0.75
SMARCC2-201ENST00000267064 RYR2Q92736 4967 aa10.34□□□□□ -0.75
SMARCC2-201ENST00000267064 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-201ENST00000267064 V9GYY9 64 aa10.33□□□□□ -0.76
SMARCC2-201ENST00000267064 RPS29P62273 56 aaKnown RBP10.33□□□□□ -0.76
SMARCC2-201ENST00000267064 KRTAP16-1A8MUX0 517 aa10.32□□□□□ -0.76
SMARCC2-201ENST00000267064 J3QL48 77 aa10.28□□□□□ -0.76
SMARCC2-201ENST00000267064 A6NED7 52 aa10.28□□□□□ -0.76
SMARCC2-201ENST00000267064 SPINK7P58062 85 aa10.24□□□□□ -0.77
SMARCC2-201ENST00000267064 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
SMARCC2-201ENST00000267064 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.77
SMARCC2-201ENST00000267064 SPTSSBQ8NFR3 76 aa10.2□□□□□ -0.78
SMARCC2-201ENST00000267064 KRTAP13-3Q3SY46 172 aa10.19□□□□□ -0.78
SMARCC2-201ENST00000267064 KRTAP10-8P60410 259 aa10.17□□□□□ -0.78
SMARCC2-201ENST00000267064 Q1T7F1 81 aa10.16□□□□□ -0.78
SMARCC2-201ENST00000267064 RYR3Q15413 4870 aa10.14□□□□□ -0.79
SMARCC2-201ENST00000267064 SEC61GP60059 68 aa10.13□□□□□ -0.79
SMARCC2-201ENST00000267064 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
SMARCC2-201ENST00000267064 A0A1B0GU69 56 aa10.12□□□□□ -0.79
SMARCC2-201ENST00000267064 A8MUU9 505 aa10.11□□□□□ -0.79
SMARCC2-201ENST00000267064 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
SMARCC2-201ENST00000267064 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
SMARCC2-201ENST00000267064 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
SMARCC2-201ENST00000267064 Q75L30 129 aa10.02□□□□□ -0.8
SMARCC2-201ENST00000267064 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.8
SMARCC2-201ENST00000267064 Q5VV11 94 aa10.02□□□□□ -0.81
SMARCC2-201ENST00000267064 PRO0628Q9UI54 55 aa10□□□□□ -0.81
SMARCC2-201ENST00000267064 XP32Q5T750 250 aa9.97□□□□□ -0.81
SMARCC2-201ENST00000267064 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
SMARCC2-201ENST00000267064 RYR1P21817 5038 aa9.96□□□□□ -0.81
SMARCC2-201ENST00000267064 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
SMARCC2-201ENST00000267064 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
SMARCC2-201ENST00000267064 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
SMARCC2-201ENST00000267064 A8MU10 97 aa9.89□□□□□ -0.83
SMARCC2-201ENST00000267064 PMAIP1Q13794 54 aa9.88□□□□□ -0.83
SMARCC2-201ENST00000267064 HSPG2P98160 4391 aa9.88□□□□□ -0.83
SMARCC2-201ENST00000267064 COX6B2Q6YFQ2 88 aa9.87□□□□□ -0.83
SMARCC2-201ENST00000267064 EPPK1P58107 5090 aaKnown RBP9.86□□□□□ -0.83
SMARCC2-201ENST00000267064 FAT3Q8TDW7 4589 aa9.8□□□□□ -0.84
SMARCC2-201ENST00000267064 UQCR11O14957 56 aa9.78□□□□□ -0.84
SMARCC2-201ENST00000267064 RBM12B-AS1Q9P1G2 102 aa9.77□□□□□ -0.84
SMARCC2-201ENST00000267064 MIR22HGQ0VDD5 57 aa9.74□□□□□ -0.85
SMARCC2-201ENST00000267064 LCA10Q71F78 164 aa9.72□□□□□ -0.85
SMARCC2-201ENST00000267064 CDC42SE1Q9NRR8 79 aa9.71□□□□□ -0.86
SMARCC2-201ENST00000267064 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
SMARCC2-201ENST00000267064 S4R3F8 94 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms