RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
NEIL3-201ENST00000264596 A0A087X002 238 aa11.71□□□□□ -0.53
NEIL3-201ENST00000264596 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.53
NEIL3-201ENST00000264596 MEGF8Q7Z7M0 2845 aa11.7□□□□□ -0.54
NEIL3-201ENST00000264596 SPINK6Q6UWN8 80 aa11.69□□□□□ -0.54
NEIL3-201ENST00000264596 TGP01266 2768 aa11.69□□□□□ -0.54
NEIL3-201ENST00000264596 IGLV7-43P04211 117 aa11.69□□□□□ -0.54
NEIL3-201ENST00000264596 MRPL34Q9BQ48 92 aaKnown RBP11.69□□□□□ -0.54
NEIL3-201ENST00000264596 CD164Q04900 197 aa11.68□□□□□ -0.54
NEIL3-201ENST00000264596 IGLV7-46A0A075B6I9 117 aa11.67□□□□□ -0.54
NEIL3-201ENST00000264596 LY6G6CO95867 125 aa11.67□□□□□ -0.54
NEIL3-201ENST00000264596 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
NEIL3-201ENST00000264596 CHKB-CPT1BH3BT56 60 aa11.66□□□□□ -0.54
NEIL3-201ENST00000264596 COA5Q86WW8 74 aa11.64□□□□□ -0.55
NEIL3-201ENST00000264596 PRR15LQ9BU68 103 aa11.64□□□□□ -0.55
NEIL3-201ENST00000264596 Q75L30 129 aa11.6□□□□□ -0.55
NEIL3-201ENST00000264596 LOC101927531A0A1B0GV80 90 aa11.6□□□□□ -0.55
NEIL3-201ENST00000264596 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
NEIL3-201ENST00000264596 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
NEIL3-201ENST00000264596 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
NEIL3-201ENST00000264596 DNHD1Q96M86 4753 aa11.57□□□□□ -0.56
NEIL3-201ENST00000264596 DNAH5Q8TE73 4624 aa11.57□□□□□ -0.56
NEIL3-201ENST00000264596 LCA10Q71F78 164 aa11.57□□□□□ -0.56
NEIL3-201ENST00000264596 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
NEIL3-201ENST00000264596 KTN1-AS1Q86SY8 53 aa11.55□□□□□ -0.56
NEIL3-201ENST00000264596 ATP11AUNQ6ZP68 121 aa11.54□□□□□ -0.56
NEIL3-201ENST00000264596 Q5W150 140 aa11.52□□□□□ -0.57
NEIL3-201ENST00000264596 SSBP3-AS1Q7Z2R9 100 aa11.5□□□□□ -0.57
NEIL3-201ENST00000264596 A6NED7 52 aa11.49□□□□□ -0.57
NEIL3-201ENST00000264596 SPTSSBQ8NFR3 76 aa11.49□□□□□ -0.57
NEIL3-201ENST00000264596 A6NN06 94 aa11.46□□□□□ -0.57
NEIL3-201ENST00000264596 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.57
NEIL3-201ENST00000264596 HRES1P13985 223 aa11.46□□□□□ -0.58
NEIL3-201ENST00000264596 LINC01558Q9Y6Z2 57 aa11.44□□□□□ -0.58
NEIL3-201ENST00000264596 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
NEIL3-201ENST00000264596 SPAG11AQ6PDA7 123 aa11.44□□□□□ -0.58
NEIL3-201ENST00000264596 C8orf87E5RJ46 101 aa11.42□□□□□ -0.58
NEIL3-201ENST00000264596 KRTAP13-2Q52LG2 175 aa11.42□□□□□ -0.58
NEIL3-201ENST00000264596 KRTAP10-1P60331 282 aa11.41□□□□□ -0.58
NEIL3-201ENST00000264596 RBM12B-AS1Q9P1G2 102 aa11.41□□□□□ -0.58
NEIL3-201ENST00000264596 LRP1BQ9NZR2 4599 aa11.4□□□□□ -0.58
NEIL3-201ENST00000264596 LINC00313P59037 77 aa11.38□□□□□ -0.59
NEIL3-201ENST00000264596 RETNLBQ9BQ08 111 aa11.38□□□□□ -0.59
NEIL3-201ENST00000264596 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
NEIL3-201ENST00000264596 PKD1P98161 4303 aa11.36□□□□□ -0.59
NEIL3-201ENST00000264596 Q6ZSA8 131 aa11.35□□□□□ -0.59
NEIL3-201ENST00000264596 FAT2Q9NYQ8 4349 aa11.31□□□□□ -0.6
NEIL3-201ENST00000264596 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
NEIL3-201ENST00000264596 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
NEIL3-201ENST00000264596 FAM229AH3BQW9 127 aa11.28□□□□□ -0.6
NEIL3-201ENST00000264596 SPINK7P58062 85 aa11.28□□□□□ -0.6
NEIL3-201ENST00000264596 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.6
NEIL3-201ENST00000264596 ACYP2P14621 99 aa11.24□□□□□ -0.61
NEIL3-201ENST00000264596 VPS13BQ7Z7G8 4022 aa11.23□□□□□ -0.61
NEIL3-201ENST00000264596 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
NEIL3-201ENST00000264596 IGKV2-30P06310 120 aa11.2□□□□□ -0.62
NEIL3-201ENST00000264596 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
NEIL3-201ENST00000264596 DMAC1Q96GE9 116 aa11.19□□□□□ -0.62
NEIL3-201ENST00000264596 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
NEIL3-201ENST00000264596 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
NEIL3-201ENST00000264596 IGKV2D-30A0A075B6S6 120 aa11.13□□□□□ -0.63
NEIL3-201ENST00000264596 SPINK1P00995 79 aa11.07□□□□□ -0.64
NEIL3-201ENST00000264596 PKHD1P08F94 4074 aa11.03□□□□□ -0.64
NEIL3-201ENST00000264596 LINC00304Q8N9R0 145 aa10.99□□□□□ -0.65
NEIL3-201ENST00000264596 A0A1B0GU69 56 aa10.98□□□□□ -0.65
NEIL3-201ENST00000264596 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
NEIL3-201ENST00000264596 SACSQ9NZJ4 4579 aa10.96□□□□□ -0.66
NEIL3-201ENST00000264596 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
NEIL3-201ENST00000264596 DYNC1H1Q14204 4646 aaKnown RBP10.91□□□□□ -0.66
NEIL3-201ENST00000264596 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
NEIL3-201ENST00000264596 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
NEIL3-201ENST00000264596 Q8N1X5 172 aa10.87□□□□□ -0.67
NEIL3-201ENST00000264596 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
NEIL3-201ENST00000264596 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
NEIL3-201ENST00000264596 FAT1Q14517 4588 aa10.83□□□□□ -0.68
NEIL3-201ENST00000264596 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
NEIL3-201ENST00000264596 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
NEIL3-201ENST00000264596 MIR22HGQ0VDD5 57 aa10.76□□□□□ -0.69
NEIL3-201ENST00000264596 UQCR11O14957 56 aa10.75□□□□□ -0.69
NEIL3-201ENST00000264596 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
NEIL3-201ENST00000264596 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
NEIL3-201ENST00000264596 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
NEIL3-201ENST00000264596 A8MUU9 505 aa10.7□□□□□ -0.7
NEIL3-201ENST00000264596 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
NEIL3-201ENST00000264596 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
NEIL3-201ENST00000264596 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
NEIL3-201ENST00000264596 RYR2Q92736 4967 aa10.58□□□□□ -0.72
NEIL3-201ENST00000264596 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
NEIL3-201ENST00000264596 FLG2Q5D862 2391 aaPredicted RBP10.47□□□□□ -0.73
NEIL3-201ENST00000264596 KMT2CQ8NEZ4 4911 aaKnown RBP10.46□□□□□ -0.74
NEIL3-201ENST00000264596 FAT3Q8TDW7 4589 aa10.44□□□□□ -0.74
NEIL3-201ENST00000264596 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
NEIL3-201ENST00000264596 H0YAA0 97 aa10.41□□□□□ -0.74
NEIL3-201ENST00000264596 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
NEIL3-201ENST00000264596 A0A1B0GU33 70 aa10.37□□□□□ -0.75
NEIL3-201ENST00000264596 TNXBP22105 4242 aa10.37□□□□□ -0.75
NEIL3-201ENST00000264596 H3BS24 57 aa10.36□□□□□ -0.75
NEIL3-201ENST00000264596 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
NEIL3-201ENST00000264596 KRTAP10-8P60410 259 aa10.31□□□□□ -0.76
NEIL3-201ENST00000264596 Q5VSD8 79 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms