RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 ZFHX4Q86UP3 3567 aa5.6□□□□□ -1.51
RAB3GAP1-201ENST00000264158 TENM2Q9NT68 2774 aa5.58□□□□□ -1.52
RAB3GAP1-201ENST00000264158 TENM3Q9P273 2699 aa5.57□□□□□ -1.52
RAB3GAP1-201ENST00000264158 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
RAB3GAP1-201ENST00000264158 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
RAB3GAP1-201ENST00000264158 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
RAB3GAP1-201ENST00000264158 KRTAP29-1A8MX34 341 aaPredicted RBP5.55□□□□□ -1.52
RAB3GAP1-201ENST00000264158 SPINK7P58062 85 aa5.55□□□□□ -1.52
RAB3GAP1-201ENST00000264158 A0A0D9SG42 100 aa5.54□□□□□ -1.52
RAB3GAP1-201ENST00000264158 SMG1Q96Q15 3661 aaKnown RBP5.52□□□□□ -1.53
RAB3GAP1-201ENST00000264158 PANO1I0J062 215 aa5.51□□□□□ -1.53
RAB3GAP1-201ENST00000264158 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
RAB3GAP1-201ENST00000264158 Q5W150 140 aa5.51□□□□□ -1.53
RAB3GAP1-201ENST00000264158 MXRA5Q9NR99 2828 aa5.51□□□□□ -1.53
RAB3GAP1-201ENST00000264158 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
RAB3GAP1-201ENST00000264158 S4R3F8 94 aa5.5□□□□□ -1.53
RAB3GAP1-201ENST00000264158 R4GN34 69 aa5.5□□□□□ -1.53
RAB3GAP1-201ENST00000264158 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
RAB3GAP1-201ENST00000264158 CSMD1Q96PZ7 3565 aa5.47□□□□□ -1.53
RAB3GAP1-201ENST00000264158 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
RAB3GAP1-201ENST00000264158 TENM1Q9UKZ4 2725 aa5.45□□□□□ -1.54
RAB3GAP1-201ENST00000264158 PDZD2O15018 2839 aa5.45□□□□□ -1.54
RAB3GAP1-201ENST00000264158 A0A087X002 238 aa5.44□□□□□ -1.54
RAB3GAP1-201ENST00000264158 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
RAB3GAP1-201ENST00000264158 A0A1B0GU33 70 aa5.43□□□□□ -1.54
RAB3GAP1-201ENST00000264158 Q6ZRN7 208 aaPredicted RBP5.43□□□□□ -1.54
RAB3GAP1-201ENST00000264158 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
RAB3GAP1-201ENST00000264158 DMAC1Q96GE9 116 aa5.41□□□□□ -1.54
RAB3GAP1-201ENST00000264158 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
RAB3GAP1-201ENST00000264158 PKD1L1Q8TDX9 2849 aa5.39□□□□□ -1.55
RAB3GAP1-201ENST00000264158 A8MU10 97 aa5.39□□□□□ -1.55
RAB3GAP1-201ENST00000264158 NBPF19A0A087WUL8 3843 aa5.37□□□□□ -1.55
RAB3GAP1-201ENST00000264158 OTOGQ6ZRI0 2925 aa5.37□□□□□ -1.55
RAB3GAP1-201ENST00000264158 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
RAB3GAP1-201ENST00000264158 CELSR1Q9NYQ6 3014 aa5.36□□□□□ -1.55
RAB3GAP1-201ENST00000264158 BSNQ9UPA5 3926 aa5.36□□□□□ -1.55
RAB3GAP1-201ENST00000264158 M0QZ58 72 aa5.33□□□□□ -1.56
RAB3GAP1-201ENST00000264158 KRTAP13-1Q8IUC0 172 aa5.33□□□□□ -1.56
RAB3GAP1-201ENST00000264158 SVEP1Q4LDE5 3571 aa5.32□□□□□ -1.56
RAB3GAP1-201ENST00000264158 A6NN06 94 aa5.31□□□□□ -1.56
RAB3GAP1-201ENST00000264158 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
RAB3GAP1-201ENST00000264158 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
RAB3GAP1-201ENST00000264158 ZFHX3Q15911 3703 aa5.26□□□□□ -1.57
RAB3GAP1-201ENST00000264158 ASB16-AS1Q495Z4 193 aa5.25□□□□□ -1.57
RAB3GAP1-201ENST00000264158 H3BS24 57 aa5.24□□□□□ -1.57
RAB3GAP1-201ENST00000264158 CSMD2Q7Z408 3487 aa5.24□□□□□ -1.57
RAB3GAP1-201ENST00000264158 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
RAB3GAP1-201ENST00000264158 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
RAB3GAP1-201ENST00000264158 ADM2Q7Z4H4 148 aa5.22□□□□□ -1.57
RAB3GAP1-201ENST00000264158 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
RAB3GAP1-201ENST00000264158 CUBNO60494 3623 aa5.22□□□□□ -1.57
RAB3GAP1-201ENST00000264158 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
RAB3GAP1-201ENST00000264158 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
RAB3GAP1-201ENST00000264158 SRRM2Q9UQ35 2752 aaKnown RBP5.18□□□□□ -1.58
RAB3GAP1-201ENST00000264158 VWFP04275 2813 aa5.18□□□□□ -1.58
RAB3GAP1-201ENST00000264158 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
RAB3GAP1-201ENST00000264158 ROMO1P60602 79 aa5.16□□□□□ -1.58
RAB3GAP1-201ENST00000264158 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
RAB3GAP1-201ENST00000264158 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
RAB3GAP1-201ENST00000264158 ANK3Q12955 4377 aaKnown RBP5.13□□□□□ -1.59
RAB3GAP1-201ENST00000264158 A8MUU9 505 aa5.1□□□□□ -1.59
RAB3GAP1-201ENST00000264158 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
RAB3GAP1-201ENST00000264158 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
RAB3GAP1-201ENST00000264158 XP32Q5T750 250 aa5.07□□□□□ -1.6
RAB3GAP1-201ENST00000264158 TGP01266 2768 aa5.05□□□□□ -1.6
RAB3GAP1-201ENST00000264158 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
RAB3GAP1-201ENST00000264158 KRTAP1-4P0C5Y4 121 aa5□□□□□ -1.61
RAB3GAP1-201ENST00000264158 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
RAB3GAP1-201ENST00000264158 VPS13CQ709C8 3753 aa5□□□□□ -1.61
RAB3GAP1-201ENST00000264158 TRRAPQ9Y4A5 3859 aa4.99□□□□□ -1.61
RAB3GAP1-201ENST00000264158 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
RAB3GAP1-201ENST00000264158 ZNF469Q96JG9 3925 aaPredicted RBP4.97□□□□□ -1.61
RAB3GAP1-201ENST00000264158 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
RAB3GAP1-201ENST00000264158 H0YAA0 97 aa4.93□□□□□ -1.62
RAB3GAP1-201ENST00000264158 AKAP9Q99996 3911 aa4.9□□□□□ -1.62
RAB3GAP1-201ENST00000264158 TNP1P09430 55 aa4.86□□□□□ -1.63
RAB3GAP1-201ENST00000264158 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
RAB3GAP1-201ENST00000264158 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
RAB3GAP1-201ENST00000264158 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
RAB3GAP1-201ENST00000264158 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
RAB3GAP1-201ENST00000264158 P0C880 135 aa4.73□□□□□ -1.65
RAB3GAP1-201ENST00000264158 MEGF8Q7Z7M0 2845 aa4.72□□□□□ -1.65
RAB3GAP1-201ENST00000264158 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
RAB3GAP1-201ENST00000264158 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
RAB3GAP1-201ENST00000264158 COL7A1Q02388 2944 aa4.66□□□□□ -1.66
RAB3GAP1-201ENST00000264158 KRTAP12-2P59991 146 aa4.59□□□□□ -1.68
RAB3GAP1-201ENST00000264158 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
RAB3GAP1-201ENST00000264158 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
RAB3GAP1-201ENST00000264158 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
RAB3GAP1-201ENST00000264158 DNHD1Q96M86 4753 aa4.57□□□□□ -1.68
RAB3GAP1-201ENST00000264158 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
RAB3GAP1-201ENST00000264158 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
RAB3GAP1-201ENST00000264158 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
RAB3GAP1-201ENST00000264158 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
RAB3GAP1-201ENST00000264158 ANK2Q01484 3957 aa4.47□□□□□ -1.69
RAB3GAP1-201ENST00000264158 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
RAB3GAP1-201ENST00000264158 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
RAB3GAP1-201ENST00000264158 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
RAB3GAP1-201ENST00000264158 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
RAB3GAP1-201ENST00000264158 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms