RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ATXN8Q156A1 80 aa8.16□□□□□ -1.1
USE1-201ENST00000263897 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
USE1-201ENST00000263897 Q6ZQT0 140 aa8.15□□□□□ -1.1
USE1-201ENST00000263897 J3KT08 172 aa8.14□□□□□ -1.11
USE1-201ENST00000263897 JMJD7-PLA2G4BH0Y9G9 81 aa8.13□□□□□ -1.11
USE1-201ENST00000263897 SMIM6P0DI80 62 aa8.12□□□□□ -1.11
USE1-201ENST00000263897 LOC110117498A0A087WWA1 95 aa8.1□□□□□ -1.11
USE1-201ENST00000263897 A0A1B0GW54 56 aa8.1□□□□□ -1.11
USE1-201ENST00000263897 HRES1P13985 223 aa8.09□□□□□ -1.11
USE1-201ENST00000263897 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
USE1-201ENST00000263897 NDUFB1O75438 58 aa8.08□□□□□ -1.12
USE1-201ENST00000263897 PDE6GP18545 87 aa8.08□□□□□ -1.12
USE1-201ENST00000263897 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
USE1-201ENST00000263897 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
USE1-201ENST00000263897 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
USE1-201ENST00000263897 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
USE1-201ENST00000263897 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
USE1-201ENST00000263897 TSTD3H0UI37 97 aa8.04□□□□□ -1.12
USE1-201ENST00000263897 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
USE1-201ENST00000263897 C14orf132Q9NPU4 83 aa8.04□□□□□ -1.12
USE1-201ENST00000263897 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
USE1-201ENST00000263897 A8MWP4 228 aa8.02□□□□□ -1.13
USE1-201ENST00000263897 BATFQ16520 125 aa8.02□□□□□ -1.13
USE1-201ENST00000263897 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
USE1-201ENST00000263897 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
USE1-201ENST00000263897 SPINK7P58062 85 aa7.99□□□□□ -1.13
USE1-201ENST00000263897 NREPQ16612 68 aa7.98□□□□□ -1.13
USE1-201ENST00000263897 C9orf118A6NHY6 69 aa7.97□□□□□ -1.13
USE1-201ENST00000263897 PRR15Q8IV56 129 aa7.96□□□□□ -1.14
USE1-201ENST00000263897 Q6ZVQ6 151 aa7.95□□□□□ -1.14
USE1-201ENST00000263897 MTURNQ8N3F0 131 aa7.95□□□□□ -1.14
USE1-201ENST00000263897 LOC105371267A0A1B0GV96 52 aa7.94□□□□□ -1.14
USE1-201ENST00000263897 H3BT86 120 aa7.93□□□□□ -1.14
USE1-201ENST00000263897 TAX1BP3O14907 124 aa7.93□□□□□ -1.14
USE1-201ENST00000263897 MT2AP02795 61 aa7.93□□□□□ -1.14
USE1-201ENST00000263897 A0A1W2PPM0 123 aa7.92□□□□□ -1.14
USE1-201ENST00000263897 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
USE1-201ENST00000263897 TMEM254Q8TBM7 123 aa7.88□□□□□ -1.15
USE1-201ENST00000263897 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
USE1-201ENST00000263897 MT1FP04733 61 aa7.86□□□□□ -1.15
USE1-201ENST00000263897 K7EQZ3 153 aa7.85□□□□□ -1.15
USE1-201ENST00000263897 WFDC13Q8IUB5 93 aa7.85□□□□□ -1.15
USE1-201ENST00000263897 hDV103S1A0JD37 113 aa7.84□□□□□ -1.15
USE1-201ENST00000263897 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
USE1-201ENST00000263897 USH2AO75445 5202 aa7.82□□□□□ -1.16
USE1-201ENST00000263897 BPY2O14599 106 aa7.82□□□□□ -1.16
USE1-201ENST00000263897 KRTAP9-3Q9BYQ3 159 aa7.81□□□□□ -1.16
USE1-201ENST00000263897 SPCS1Q9Y6A9 102 aa7.8□□□□□ -1.16
USE1-201ENST00000263897 NDUFS5O43920 106 aa7.79□□□□□ -1.16
USE1-201ENST00000263897 LCE2BO14633 110 aa7.78□□□□□ -1.16
USE1-201ENST00000263897 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
USE1-201ENST00000263897 Q5W150 140 aa7.74□□□□□ -1.17
USE1-201ENST00000263897 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
USE1-201ENST00000263897 Q8N9L7 120 aa7.73□□□□□ -1.17
USE1-201ENST00000263897 COL5A1-AS1Q5SY13 56 aa7.72□□□□□ -1.17
USE1-201ENST00000263897 CASC2Q6XLA1 102 aa7.72□□□□□ -1.17
USE1-201ENST00000263897 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
USE1-201ENST00000263897 PRO0461Q9UI25 63 aa7.7□□□□□ -1.18
USE1-201ENST00000263897 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
USE1-201ENST00000263897 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
USE1-201ENST00000263897 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
USE1-201ENST00000263897 HCG22E2RYF7 251 aa7.67□□□□□ -1.18
USE1-201ENST00000263897 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
USE1-201ENST00000263897 K7EP34 96 aa7.66□□□□□ -1.18
USE1-201ENST00000263897 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
USE1-201ENST00000263897 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
USE1-201ENST00000263897 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
USE1-201ENST00000263897 CXCL6P80162 114 aa7.64□□□□□ -1.19
USE1-201ENST00000263897 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
USE1-201ENST00000263897 C4orf26Q17RF5 130 aa7.58□□□□□ -1.2
USE1-201ENST00000263897 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
USE1-201ENST00000263897 GTF2H5Q6ZYL4 71 aa7.56□□□□□ -1.2
USE1-201ENST00000263897 F8W1H4 67 aa7.54□□□□□ -1.2
USE1-201ENST00000263897 ETDBQ3ZM63 59 aa7.51□□□□□ -1.21
USE1-201ENST00000263897 KRTAP19-6Q3LI70 58 aa7.5□□□□□ -1.21
USE1-201ENST00000263897 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
USE1-201ENST00000263897 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
USE1-201ENST00000263897 PCP4L1A6NKN8 68 aa7.48□□□□□ -1.21
USE1-201ENST00000263897 C1orf64Q8NEQ6 169 aa7.44□□□□□ -1.22
USE1-201ENST00000263897 C5orf47Q569G3 176 aa7.43□□□□□ -1.22
USE1-201ENST00000263897 S4R3F8 94 aa7.4□□□□□ -1.22
USE1-201ENST00000263897 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
USE1-201ENST00000263897 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
USE1-201ENST00000263897 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
USE1-201ENST00000263897 ACYP1P07311 99 aa7.36□□□□□ -1.23
USE1-201ENST00000263897 LCA10Q71F78 164 aa7.36□□□□□ -1.23
USE1-201ENST00000263897 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
USE1-201ENST00000263897 FAM236AA0A1B0GUQ0 79 aa7.34□□□□□ -1.23
USE1-201ENST00000263897 FAM236BA0A1B0GV22 79 aa7.34□□□□□ -1.23
USE1-201ENST00000263897 TRAV22A0A0B4J277 110 aa7.3□□□□□ -1.24
USE1-201ENST00000263897 FAM240AA0A1B0GVK7 77 aa7.3□□□□□ -1.24
USE1-201ENST00000263897 MACF1Q9UPN3 7388 aaKnown RBP7.28□□□□□ -1.24
USE1-201ENST00000263897 LOC101927531A0A1B0GV80 90 aa7.28□□□□□ -1.24
USE1-201ENST00000263897 ATP5EP2Q5VTU8 51 aa7.28□□□□□ -1.24
USE1-201ENST00000263897 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
USE1-201ENST00000263897 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
USE1-201ENST00000263897 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
USE1-201ENST00000263897 UQCRQO14949 82 aa7.23□□□□□ -1.25
USE1-201ENST00000263897 A0A087WVE0 104 aa7.22□□□□□ -1.25
USE1-201ENST00000263897 MT1BP07438 61 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms