RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 KLKP1Q107X0 134 aa9.06□□□□□ -0.96
VPS26A-201ENST00000263559 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
VPS26A-201ENST00000263559 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
VPS26A-201ENST00000263559 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
VPS26A-201ENST00000263559 SPINK1P00995 79 aa9.06□□□□□ -0.96
VPS26A-201ENST00000263559 RYR1P21817 5038 aa9.04□□□□□ -0.96
VPS26A-201ENST00000263559 LINC00304Q8N9R0 145 aa9.04□□□□□ -0.96
VPS26A-201ENST00000263559 PKHD1L1Q86WI1 4243 aa9.03□□□□□ -0.96
VPS26A-201ENST00000263559 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
VPS26A-201ENST00000263559 Q5VSD8 79 aa9.01□□□□□ -0.97
VPS26A-201ENST00000263559 C5orf47Q569G3 176 aa9□□□□□ -0.97
VPS26A-201ENST00000263559 SPAG11AQ6PDA7 123 aa8.99□□□□□ -0.97
VPS26A-201ENST00000263559 H7BZZ5 65 aa8.98□□□□□ -0.97
VPS26A-201ENST00000263559 EPPK1P58107 5090 aaKnown RBP8.98□□□□□ -0.97
VPS26A-201ENST00000263559 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
VPS26A-201ENST00000263559 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
VPS26A-201ENST00000263559 KRTAP17-1Q9BYP8 105 aa8.97□□□□□ -0.97
VPS26A-201ENST00000263559 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
VPS26A-201ENST00000263559 TMEM258P61165 79 aa8.96□□□□□ -0.98
VPS26A-201ENST00000263559 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
VPS26A-201ENST00000263559 NDUFS5O43920 106 aa8.94□□□□□ -0.98
VPS26A-201ENST00000263559 LINC00313P59037 77 aa8.94□□□□□ -0.98
VPS26A-201ENST00000263559 NDUFC1O43677 76 aa8.93□□□□□ -0.98
VPS26A-201ENST00000263559 MP68P56378 58 aa8.92□□□□□ -0.98
VPS26A-201ENST00000263559 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
VPS26A-201ENST00000263559 H0Y9P7 68 aa8.92□□□□□ -0.98
VPS26A-201ENST00000263559 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
VPS26A-201ENST00000263559 LINC00208Q96KT6 92 aa8.9□□□□□ -0.98
VPS26A-201ENST00000263559 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
VPS26A-201ENST00000263559 TRAV22A0A0B4J277 110 aa8.89□□□□□ -0.99
VPS26A-201ENST00000263559 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
VPS26A-201ENST00000263559 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
VPS26A-201ENST00000263559 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
VPS26A-201ENST00000263559 Q8N1X5 172 aa8.85□□□□□ -0.99
VPS26A-201ENST00000263559 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
VPS26A-201ENST00000263559 H3BPC8 53 aa8.85□□□□□ -0.99
VPS26A-201ENST00000263559 TNXBP22105 4242 aa8.84□□□□□ -0.99
VPS26A-201ENST00000263559 C1orf64Q8NEQ6 169 aa8.84□□□□□ -0.99
VPS26A-201ENST00000263559 Q8N9P0 234 aaPredicted RBP8.82□□□□□ -1
VPS26A-201ENST00000263559 Q5W150 140 aa8.81□□□□□ -1
VPS26A-201ENST00000263559 FAT3Q8TDW7 4589 aa8.81□□□□□ -1
VPS26A-201ENST00000263559 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
VPS26A-201ENST00000263559 RETNLBQ9BQ08 111 aa8.8□□□□□ -1
VPS26A-201ENST00000263559 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1
VPS26A-201ENST00000263559 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
VPS26A-201ENST00000263559 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
VPS26A-201ENST00000263559 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
VPS26A-201ENST00000263559 MYCBP2O75592 4640 aa8.71□□□□□ -1.02
VPS26A-201ENST00000263559 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
VPS26A-201ENST00000263559 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
VPS26A-201ENST00000263559 OXTP01178 125 aa8.69□□□□□ -1.02
VPS26A-201ENST00000263559 PRR4Q16378 134 aa8.69□□□□□ -1.02
VPS26A-201ENST00000263559 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
VPS26A-201ENST00000263559 SERP1Q9Y6X1 66 aa8.68□□□□□ -1.02
VPS26A-201ENST00000263559 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
VPS26A-201ENST00000263559 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
VPS26A-201ENST00000263559 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
VPS26A-201ENST00000263559 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.03
VPS26A-201ENST00000263559 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
VPS26A-201ENST00000263559 A8MUU9 505 aa8.61□□□□□ -1.03
VPS26A-201ENST00000263559 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
VPS26A-201ENST00000263559 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
VPS26A-201ENST00000263559 FP248Q71RG6 208 aaPredicted RBP8.58□□□□□ -1.04
VPS26A-201ENST00000263559 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
VPS26A-201ENST00000263559 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
VPS26A-201ENST00000263559 HRES1P13985 223 aa8.52□□□□□ -1.05
VPS26A-201ENST00000263559 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
VPS26A-201ENST00000263559 Q75L30 129 aa8.5□□□□□ -1.05
VPS26A-201ENST00000263559 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
VPS26A-201ENST00000263559 C7orf65Q6ZTY9 151 aa8.47□□□□□ -1.05
VPS26A-201ENST00000263559 HERC2O95714 4834 aa8.46□□□□□ -1.06
VPS26A-201ENST00000263559 XP32Q5T750 250 aa8.44□□□□□ -1.06
VPS26A-201ENST00000263559 COA5Q86WW8 74 aa8.44□□□□□ -1.06
VPS26A-201ENST00000263559 RPL37P61927 97 aaKnown RBP8.4□□□□□ -1.07
VPS26A-201ENST00000263559 DMAC1Q96GE9 116 aa8.4□□□□□ -1.07
VPS26A-201ENST00000263559 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
VPS26A-201ENST00000263559 SPINK7P58062 85 aa8.37□□□□□ -1.07
VPS26A-201ENST00000263559 ACYP2P14621 99 aa8.37□□□□□ -1.07
VPS26A-201ENST00000263559 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
VPS26A-201ENST00000263559 J3QL48 77 aa8.35□□□□□ -1.07
VPS26A-201ENST00000263559 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
VPS26A-201ENST00000263559 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
VPS26A-201ENST00000263559 Q1T7F1 81 aa8.28□□□□□ -1.08
VPS26A-201ENST00000263559 LPAP08519 4548 aa8.28□□□□□ -1.08
VPS26A-201ENST00000263559 LRP2P98164 4655 aa8.26□□□□□ -1.09
VPS26A-201ENST00000263559 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
VPS26A-201ENST00000263559 A8MUN3 132 aa8.23□□□□□ -1.09
VPS26A-201ENST00000263559 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
VPS26A-201ENST00000263559 V9GYY9 64 aa8.2□□□□□ -1.1
VPS26A-201ENST00000263559 PSPHP1O15172 72 aa8.17□□□□□ -1.1
VPS26A-201ENST00000263559 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
VPS26A-201ENST00000263559 PCLOQ9Y6V0 5065 aa8.17□□□□□ -1.1
VPS26A-201ENST00000263559 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
VPS26A-201ENST00000263559 PRR15LQ9BU68 103 aa8.12□□□□□ -1.11
VPS26A-201ENST00000263559 Q5VV11 94 aa8.08□□□□□ -1.12
VPS26A-201ENST00000263559 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
VPS26A-201ENST00000263559 HERC1Q15751 4861 aa8.01□□□□□ -1.13
VPS26A-201ENST00000263559 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
VPS26A-201ENST00000263559 A0A1B0GU69 56 aa7.96□□□□□ -1.13
VPS26A-201ENST00000263559 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms