RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 LIMD2Q9BT23 127 aa13.85□□□□□ -0.19
SCN1B-201ENST00000262631 Q5XG85 94 aa13.85□□□□□ -0.19
SCN1B-201ENST00000262631 A0A087WVE0 104 aa13.84□□□□□ -0.19
SCN1B-201ENST00000262631 CYSTM1Q9H1C7 97 aa13.76□□□□□ -0.21
SCN1B-201ENST00000262631 ASB16-AS1Q495Z4 193 aa13.75□□□□□ -0.21
SCN1B-201ENST00000262631 C1orf195Q5TG92 126 aa13.75□□□□□ -0.21
SCN1B-201ENST00000262631 TRAV7A0A075B6U4 112 aa13.72□□□□□ -0.21
SCN1B-201ENST00000262631 A0A1B0GW54 56 aa13.72□□□□□ -0.21
SCN1B-201ENST00000262631 Q96NJ1 140 aa13.69□□□□□ -0.22
SCN1B-201ENST00000262631 CXCL6P80162 114 aa13.69□□□□□ -0.22
SCN1B-201ENST00000262631 PRR4Q16378 134 aa13.68□□□□□ -0.22
SCN1B-201ENST00000262631 HMCN2Q8NDA2 5059 aa13.66□□□□□ -0.22
SCN1B-201ENST00000262631 FAM236DA0A1B0GTK5 79 aa13.65□□□□□ -0.22
SCN1B-201ENST00000262631 FAM236CP0DP71 79 aa13.65□□□□□ -0.22
SCN1B-201ENST00000262631 LINC00472Q9H8W2 130 aa13.65□□□□□ -0.22
SCN1B-201ENST00000262631 DEFB116Q30KQ4 102 aa13.63□□□□□ -0.23
SCN1B-201ENST00000262631 KLKP1Q107X0 134 aa13.62□□□□□ -0.23
SCN1B-201ENST00000262631 FP248Q71RG6 208 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-201ENST00000262631 SERP1Q9Y6X1 66 aa13.62□□□□□ -0.23
SCN1B-201ENST00000262631 C20orf197Q8N268 126 aa13.61□□□□□ -0.23
SCN1B-201ENST00000262631 IGLV7-46A0A075B6I9 117 aa13.6□□□□□ -0.23
SCN1B-201ENST00000262631 Q6ZVQ6 151 aa13.6□□□□□ -0.23
SCN1B-201ENST00000262631 NDUFC1O43677 76 aa13.59□□□□□ -0.23
SCN1B-201ENST00000262631 NREPQ16612 68 aa13.59□□□□□ -0.23
SCN1B-201ENST00000262631 ATP5EP56381 51 aaPredicted RBP13.57□□□□□ -0.24
SCN1B-201ENST00000262631 LPAP08519 4548 aa13.56□□□□□ -0.24
SCN1B-201ENST00000262631 IGKV4-1P06312 121 aa13.55□□□□□ -0.24
SCN1B-201ENST00000262631 H7BZZ5 65 aa13.54□□□□□ -0.24
SCN1B-201ENST00000262631 KRTAP13-3Q3SY46 172 aa13.47□□□□□ -0.25
SCN1B-201ENST00000262631 C4orf26Q17RF5 130 aa13.46□□□□□ -0.26
SCN1B-201ENST00000262631 LRP2P98164 4655 aa13.45□□□□□ -0.26
SCN1B-201ENST00000262631 TPRXLQ17RH7 258 aa13.45□□□□□ -0.26
SCN1B-201ENST00000262631 SMIM26A0A096LP01 95 aa13.43□□□□□ -0.26
SCN1B-201ENST00000262631 C9orf92A6NGG3 77 aa13.43□□□□□ -0.26
SCN1B-201ENST00000262631 BPY2O14599 106 aa13.41□□□□□ -0.26
SCN1B-201ENST00000262631 DSCR10P59022 87 aa13.41□□□□□ -0.26
SCN1B-201ENST00000262631 A8MWP4 228 aa13.38□□□□□ -0.27
SCN1B-201ENST00000262631 IGHV6-1A0A0B4J1U7 121 aa13.37□□□□□ -0.27
SCN1B-201ENST00000262631 A0A1B0GVX0 72 aa13.36□□□□□ -0.27
SCN1B-201ENST00000262631 NOTCH2NLQ7Z3S9 236 aa13.35□□□□□ -0.27
SCN1B-201ENST00000262631 K7EQZ3 153 aa13.34□□□□□ -0.27
SCN1B-201ENST00000262631 SNURFQ9Y675 71 aa13.34□□□□□ -0.27
SCN1B-201ENST00000262631 Q8N9L7 120 aa13.33□□□□□ -0.28
SCN1B-201ENST00000262631 NDUFB1O75438 58 aa13.32□□□□□ -0.28
SCN1B-201ENST00000262631 PRR15Q8IV56 129 aa13.31□□□□□ -0.28
SCN1B-201ENST00000262631 TMEM254Q8TBM7 123 aa13.3□□□□□ -0.28
SCN1B-201ENST00000262631 PRO0628Q9UI54 55 aa13.29□□□□□ -0.28
SCN1B-201ENST00000262631 LINC00313P59037 77 aa13.28□□□□□ -0.28
SCN1B-201ENST00000262631 XP32Q5T750 250 aa13.28□□□□□ -0.28
SCN1B-201ENST00000262631 OCR1Q9BZK8 76 aa13.24□□□□□ -0.29
SCN1B-201ENST00000262631 A0A0U1RQV1 116 aa13.22□□□□□ -0.29
SCN1B-201ENST00000262631 C8orf87E5RJ46 101 aa13.22□□□□□ -0.29
SCN1B-201ENST00000262631 C8orf17Q9NRJ1 99 aa13.22□□□□□ -0.29
SCN1B-201ENST00000262631 KRTAP16-1A8MUX0 517 aa13.21□□□□□ -0.29
SCN1B-201ENST00000262631 MMP24-AS1A0A0U1RRL7 71 aa13.18□□□□□ -0.3
SCN1B-201ENST00000262631 UBR4Q5T4S7 5183 aa13.14□□□□□ -0.31
SCN1B-201ENST00000262631 C20orf166-AS1Q96NR2 134 aa13.12□□□□□ -0.31
SCN1B-201ENST00000262631 hDV103S1A0JD37 113 aa13.09□□□□□ -0.31
SCN1B-201ENST00000262631 A8MUU9 505 aa13.08□□□□□ -0.31
SCN1B-201ENST00000262631 RPL37P61927 97 aaKnown RBP13.08□□□□□ -0.31
SCN1B-201ENST00000262631 Q75L30 129 aa13.08□□□□□ -0.31
SCN1B-201ENST00000262631 WFDC13Q8IUB5 93 aa13.08□□□□□ -0.31
SCN1B-201ENST00000262631 HCG22E2RYF7 251 aa13.05□□□□□ -0.32
SCN1B-201ENST00000262631 CASC2Q6XLA1 102 aa13.05□□□□□ -0.32
SCN1B-201ENST00000262631 MRPL34Q9BQ48 92 aaKnown RBP13.03□□□□□ -0.32
SCN1B-201ENST00000262631 Q8N9P0 234 aaPredicted RBP13.02□□□□□ -0.32
SCN1B-201ENST00000262631 MUC17Q685J3 4493 aa13.02□□□□□ -0.33
SCN1B-201ENST00000262631 PCOTHQ58A44 107 aa12.98□□□□□ -0.33
SCN1B-201ENST00000262631 SEC61BP60468 96 aaKnown RBP12.97□□□□□ -0.33
SCN1B-201ENST00000262631 ZCCHC13Q8WW36 166 aaKnown RBP12.95□□□□□ -0.34
SCN1B-201ENST00000262631 ATP11AUNQ6ZP68 121 aa12.93□□□□□ -0.34
SCN1B-201ENST00000262631 NDUFS5O43920 106 aa12.92□□□□□ -0.34
SCN1B-201ENST00000262631 BRK1Q8WUW1 75 aa12.91□□□□□ -0.34
SCN1B-201ENST00000262631 MUC2Q02817 5179 aa12.9□□□□□ -0.34
SCN1B-201ENST00000262631 CYP4F30PQ9H0H9 118 aa12.89□□□□□ -0.35
SCN1B-201ENST00000262631 Q1T7F1 81 aa12.88□□□□□ -0.35
SCN1B-201ENST00000262631 RNF213Q63HN8 5207 aa12.87□□□□□ -0.35
SCN1B-201ENST00000262631 MPLKIPQ8TAP9 179 aa12.87□□□□□ -0.35
SCN1B-201ENST00000262631 KRTAP4-1Q9BYQ7 146 aa12.85□□□□□ -0.35
SCN1B-201ENST00000262631 C1orf64Q8NEQ6 169 aa12.8□□□□□ -0.36
SCN1B-201ENST00000262631 V9GYY9 64 aa12.8□□□□□ -0.36
SCN1B-201ENST00000262631 H3BPC8 53 aa12.78□□□□□ -0.36
SCN1B-201ENST00000262631 Q5W150 140 aa12.78□□□□□ -0.36
SCN1B-201ENST00000262631 MP68P56378 58 aa12.77□□□□□ -0.36
SCN1B-201ENST00000262631 SPANXA2-OT1Q8N9U9 137 aa12.71□□□□□ -0.37
SCN1B-201ENST00000262631 TP53AIP1Q9HCN2 124 aa12.71□□□□□ -0.37
SCN1B-201ENST00000262631 TRAV22A0A0B4J277 110 aa12.69□□□□□ -0.38
SCN1B-201ENST00000262631 SPINK7P58062 85 aa12.6□□□□□ -0.39
SCN1B-201ENST00000262631 H0Y9P7 68 aa12.56□□□□□ -0.4
SCN1B-201ENST00000262631 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
SCN1B-201ENST00000262631 IGKV2D-30A0A075B6S6 120 aa12.54□□□□□ -0.4
SCN1B-201ENST00000262631 IGKV2-30P06310 120 aa12.54□□□□□ -0.4
SCN1B-201ENST00000262631 PSPHP1O15172 72 aa12.48□□□□□ -0.41
SCN1B-201ENST00000262631 HRES1P13985 223 aa12.48□□□□□ -0.41
SCN1B-201ENST00000262631 C7orf65Q6ZTY9 151 aa12.48□□□□□ -0.41
SCN1B-201ENST00000262631 PMAIP1Q13794 54 aa12.45□□□□□ -0.42
SCN1B-201ENST00000262631 KRTAP19-2Q3LHN2 52 aa12.43□□□□□ -0.42
SCN1B-201ENST00000262631 A8MUN3 132 aa12.42□□□□□ -0.42
SCN1B-201ENST00000262631 Q5VV11 94 aa12.42□□□□□ -0.42
SCN1B-201ENST00000262631 FAT4Q6V0I7 4981 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms