RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SPAG11AQ6PDA7 123 aa8.69□□□□□ -1.02
SFSWAP-201ENST00000261674 DNAH6Q9C0G6 4158 aa8.69□□□□□ -1.02
SFSWAP-201ENST00000261674 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
SFSWAP-201ENST00000261674 CD164Q04900 197 aa8.68□□□□□ -1.02
SFSWAP-201ENST00000261674 RTL8CO15255 209 aa8.68□□□□□ -1.02
SFSWAP-201ENST00000261674 CIRBP-AS1Q8TBR5 109 aa8.68□□□□□ -1.02
SFSWAP-201ENST00000261674 A6NED7 52 aa8.67□□□□□ -1.02
SFSWAP-201ENST00000261674 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
SFSWAP-201ENST00000261674 A0A1B0GVX0 72 aa8.66□□□□□ -1.02
SFSWAP-201ENST00000261674 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
SFSWAP-201ENST00000261674 LIMD2Q9BT23 127 aa8.65□□□□□ -1.02
SFSWAP-201ENST00000261674 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.03
SFSWAP-201ENST00000261674 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.03
SFSWAP-201ENST00000261674 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
SFSWAP-201ENST00000261674 MRPL34Q9BQ48 92 aaKnown RBP8.63□□□□□ -1.03
SFSWAP-201ENST00000261674 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
SFSWAP-201ENST00000261674 RETNLBQ9BQ08 111 aa8.63□□□□□ -1.03
SFSWAP-201ENST00000261674 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
SFSWAP-201ENST00000261674 ZNF861PO60384 105 aa8.61□□□□□ -1.03
SFSWAP-201ENST00000261674 PKHD1P08F94 4074 aa8.6□□□□□ -1.03
SFSWAP-201ENST00000261674 HECTD4Q9Y4D8 3996 aa8.6□□□□□ -1.03
SFSWAP-201ENST00000261674 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
SFSWAP-201ENST00000261674 RYR3Q15413 4870 aa8.57□□□□□ -1.04
SFSWAP-201ENST00000261674 Q5W150 140 aa8.55□□□□□ -1.04
SFSWAP-201ENST00000261674 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
SFSWAP-201ENST00000261674 HRES1P13985 223 aa8.54□□□□□ -1.04
SFSWAP-201ENST00000261674 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
SFSWAP-201ENST00000261674 LCA10Q71F78 164 aa8.53□□□□□ -1.04
SFSWAP-201ENST00000261674 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
SFSWAP-201ENST00000261674 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.04
SFSWAP-201ENST00000261674 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
SFSWAP-201ENST00000261674 RYR2Q92736 4967 aa8.51□□□□□ -1.05
SFSWAP-201ENST00000261674 KRTAP10-1P60331 282 aa8.51□□□□□ -1.05
SFSWAP-201ENST00000261674 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
SFSWAP-201ENST00000261674 SEC61GP60059 68 aa8.5□□□□□ -1.05
SFSWAP-201ENST00000261674 FAT2Q9NYQ8 4349 aa8.5□□□□□ -1.05
SFSWAP-201ENST00000261674 IGLV7-43P04211 117 aa8.5□□□□□ -1.05
SFSWAP-201ENST00000261674 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
SFSWAP-201ENST00000261674 DNAH5Q8TE73 4624 aa8.49□□□□□ -1.05
SFSWAP-201ENST00000261674 Q75L30 129 aa8.48□□□□□ -1.05
SFSWAP-201ENST00000261674 SPINK7P58062 85 aa8.46□□□□□ -1.06
SFSWAP-201ENST00000261674 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
SFSWAP-201ENST00000261674 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
SFSWAP-201ENST00000261674 PKD1P98161 4303 aa8.42□□□□□ -1.06
SFSWAP-201ENST00000261674 LINC00313P59037 77 aa8.42□□□□□ -1.06
SFSWAP-201ENST00000261674 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
SFSWAP-201ENST00000261674 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.07
SFSWAP-201ENST00000261674 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
SFSWAP-201ENST00000261674 ACYP2P14621 99 aa8.38□□□□□ -1.07
SFSWAP-201ENST00000261674 FAT1Q14517 4588 aa8.37□□□□□ -1.07
SFSWAP-201ENST00000261674 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
SFSWAP-201ENST00000261674 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
SFSWAP-201ENST00000261674 SSBP3-AS1Q7Z2R9 100 aa8.37□□□□□ -1.07
SFSWAP-201ENST00000261674 DYNC1H1Q14204 4646 aaKnown RBP8.36□□□□□ -1.07
SFSWAP-201ENST00000261674 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
SFSWAP-201ENST00000261674 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
SFSWAP-201ENST00000261674 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
SFSWAP-201ENST00000261674 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
SFSWAP-201ENST00000261674 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
SFSWAP-201ENST00000261674 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
SFSWAP-201ENST00000261674 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
SFSWAP-201ENST00000261674 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.08
SFSWAP-201ENST00000261674 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.08
SFSWAP-201ENST00000261674 A0A1B0GU69 56 aa8.27□□□□□ -1.09
SFSWAP-201ENST00000261674 A6NN06 94 aa8.27□□□□□ -1.09
SFSWAP-201ENST00000261674 KIAA1109Q2LD37 5005 aa8.26□□□□□ -1.09
SFSWAP-201ENST00000261674 SPINK1P00995 79 aa8.26□□□□□ -1.09
SFSWAP-201ENST00000261674 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
SFSWAP-201ENST00000261674 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
SFSWAP-201ENST00000261674 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
SFSWAP-201ENST00000261674 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
SFSWAP-201ENST00000261674 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
SFSWAP-201ENST00000261674 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.1
SFSWAP-201ENST00000261674 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
SFSWAP-201ENST00000261674 Q6ZSA8 131 aa8.19□□□□□ -1.1
SFSWAP-201ENST00000261674 Q8N1X5 172 aa8.17□□□□□ -1.1
SFSWAP-201ENST00000261674 PRAC1Q96KF2 57 aa8.16□□□□□ -1.1
SFSWAP-201ENST00000261674 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
SFSWAP-201ENST00000261674 KRTAP1-4P0C5Y4 121 aa8.13□□□□□ -1.11
SFSWAP-201ENST00000261674 ADM2Q7Z4H4 148 aa8.11□□□□□ -1.11
SFSWAP-201ENST00000261674 KRTAP17-1Q9BYP8 105 aa8.1□□□□□ -1.11
SFSWAP-201ENST00000261674 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
SFSWAP-201ENST00000261674 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
SFSWAP-201ENST00000261674 UQCR11O14957 56 aa8.08□□□□□ -1.12
SFSWAP-201ENST00000261674 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
SFSWAP-201ENST00000261674 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
SFSWAP-201ENST00000261674 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
SFSWAP-201ENST00000261674 HSPG2P98160 4391 aa8.03□□□□□ -1.12
SFSWAP-201ENST00000261674 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
SFSWAP-201ENST00000261674 Q5VSD8 79 aa8.02□□□□□ -1.13
SFSWAP-201ENST00000261674 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
SFSWAP-201ENST00000261674 RYR1P21817 5038 aa8□□□□□ -1.13
SFSWAP-201ENST00000261674 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.14
SFSWAP-201ENST00000261674 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
SFSWAP-201ENST00000261674 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
SFSWAP-201ENST00000261674 ABCA13Q86UQ4 5058 aa7.82□□□□□ -1.16
SFSWAP-201ENST00000261674 FAT3Q8TDW7 4589 aa7.82□□□□□ -1.16
SFSWAP-201ENST00000261674 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
SFSWAP-201ENST00000261674 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
SFSWAP-201ENST00000261674 A0A1B0GU33 70 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms