RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
KLF3-201ENST00000261438 CELSR2Q9HCU4 2923 aa9.92□□□□□ -0.82
KLF3-201ENST00000261438 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
KLF3-201ENST00000261438 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
KLF3-201ENST00000261438 ZANQ9Y493 2812 aa9.9□□□□□ -0.82
KLF3-201ENST00000261438 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
KLF3-201ENST00000261438 DMXL1Q9Y485 3027 aa9.88□□□□□ -0.83
KLF3-201ENST00000261438 NDUFAF8A1L188 74 aa9.88□□□□□ -0.83
KLF3-201ENST00000261438 A8MUU9 505 aa9.84□□□□□ -0.83
KLF3-201ENST00000261438 Q6ZSA8 131 aa9.84□□□□□ -0.83
KLF3-201ENST00000261438 R4GN34 69 aa9.78□□□□□ -0.84
KLF3-201ENST00000261438 WDFY3Q8IZQ1 3526 aa9.77□□□□□ -0.84
KLF3-201ENST00000261438 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
KLF3-201ENST00000261438 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
KLF3-201ENST00000261438 ITPR2Q14571 2701 aa9.75□□□□□ -0.85
KLF3-201ENST00000261438 HRNRQ86YZ3 2850 aaPredicted RBP9.75□□□□□ -0.85
KLF3-201ENST00000261438 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
KLF3-201ENST00000261438 DCHS2Q6V1P9 2916 aa9.73□□□□□ -0.85
KLF3-201ENST00000261438 DCHS1Q96JQ0 3298 aa9.72□□□□□ -0.85
KLF3-201ENST00000261438 FBN2P35556 2912 aa9.72□□□□□ -0.85
KLF3-201ENST00000261438 NIPBLQ6KC79 2804 aaeCLIP9.71□□□□□ -0.86
KLF3-201ENST00000261438 NF1P21359 2839 aa9.7□□□□□ -0.86
KLF3-201ENST00000261438 KRTAP13-2Q52LG2 175 aa9.69□□□□□ -0.86
KLF3-201ENST00000261438 M0QZ58 72 aa9.67□□□□□ -0.86
KLF3-201ENST00000261438 J3QL48 77 aa9.6□□□□□ -0.87
KLF3-201ENST00000261438 H0YAA0 97 aa9.59□□□□□ -0.87
KLF3-201ENST00000261438 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
KLF3-201ENST00000261438 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
KLF3-201ENST00000261438 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
KLF3-201ENST00000261438 ZFHX4Q86UP3 3567 aa9.52□□□□□ -0.89
KLF3-201ENST00000261438 CRYBG3Q68DQ2 2970 aa9.52□□□□□ -0.89
KLF3-201ENST00000261438 ASPMQ8IZT6 3477 aa9.49□□□□□ -0.89
KLF3-201ENST00000261438 RELNP78509 3460 aa9.48□□□□□ -0.89
KLF3-201ENST00000261438 C10orf95Q9H7T3 257 aa9.47□□□□□ -0.89
KLF3-201ENST00000261438 MXRA5Q9NR99 2828 aa9.41□□□□□ -0.9
KLF3-201ENST00000261438 KRTAP13-3Q3SY46 172 aa9.38□□□□□ -0.91
KLF3-201ENST00000261438 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
KLF3-201ENST00000261438 CSMD1Q96PZ7 3565 aa9.34□□□□□ -0.91
KLF3-201ENST00000261438 LAMA5O15230 3695 aa9.32□□□□□ -0.92
KLF3-201ENST00000261438 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
KLF3-201ENST00000261438 SEC61BP60468 96 aaKnown RBP9.28□□□□□ -0.92
KLF3-201ENST00000261438 TENM4Q6N022 2769 aa9.27□□□□□ -0.92
KLF3-201ENST00000261438 Q5VSD8 79 aa9.27□□□□□ -0.93
KLF3-201ENST00000261438 P0C880 135 aa9.23□□□□□ -0.93
KLF3-201ENST00000261438 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
KLF3-201ENST00000261438 TGP01266 2768 aa9.21□□□□□ -0.94
KLF3-201ENST00000261438 SMG1Q96Q15 3661 aaKnown RBP9.21□□□□□ -0.94
KLF3-201ENST00000261438 M0R2T5 61 aa9.14□□□□□ -0.95
KLF3-201ENST00000261438 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
KLF3-201ENST00000261438 CUBNO60494 3623 aa9.13□□□□□ -0.95
KLF3-201ENST00000261438 DMDP11532 3685 aa9.11□□□□□ -0.95
KLF3-201ENST00000261438 SVEP1Q4LDE5 3571 aa9.08□□□□□ -0.96
KLF3-201ENST00000261438 MUC3AQ02505 3323 aa9.06□□□□□ -0.96
KLF3-201ENST00000261438 PDZD2O15018 2839 aa9.05□□□□□ -0.96
KLF3-201ENST00000261438 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
KLF3-201ENST00000261438 TNP1P09430 55 aa8.99□□□□□ -0.97
KLF3-201ENST00000261438 TENM1Q9UKZ4 2725 aa8.96□□□□□ -0.97
KLF3-201ENST00000261438 KRTAP10-8P60410 259 aa8.96□□□□□ -0.98
KLF3-201ENST00000261438 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
KLF3-201ENST00000261438 XP32Q5T750 250 aa8.89□□□□□ -0.99
KLF3-201ENST00000261438 PKD1L1Q8TDX9 2849 aa8.88□□□□□ -0.99
KLF3-201ENST00000261438 FBN1P35555 2871 aaKnown RBP8.88□□□□□ -0.99
KLF3-201ENST00000261438 VWFP04275 2813 aa8.86□□□□□ -0.99
KLF3-201ENST00000261438 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
KLF3-201ENST00000261438 KRTAP3-1Q9BYR8 98 aa8.79□□□□□ -1
KLF3-201ENST00000261438 SPENQ96T58 3664 aaKnown RBP8.78□□□□□ -1
KLF3-201ENST00000261438 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
KLF3-201ENST00000261438 TENM2Q9NT68 2774 aa8.69□□□□□ -1.02
KLF3-201ENST00000261438 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
KLF3-201ENST00000261438 KRTAP13-4Q3LI77 160 aa8.63□□□□□ -1.03
KLF3-201ENST00000261438 KRTAP15-1Q3LI76 137 aa8.59□□□□□ -1.03
KLF3-201ENST00000261438 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
KLF3-201ENST00000261438 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
KLF3-201ENST00000261438 NBPF19A0A087WUL8 3843 aa8.55□□□□□ -1.04
KLF3-201ENST00000261438 ZFHX3Q15911 3703 aa8.52□□□□□ -1.05
KLF3-201ENST00000261438 OTOGQ6ZRI0 2925 aa8.51□□□□□ -1.05
KLF3-201ENST00000261438 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
KLF3-201ENST00000261438 A0A1B0GVY2 172 aa8.4□□□□□ -1.06
KLF3-201ENST00000261438 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
KLF3-201ENST00000261438 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
KLF3-201ENST00000261438 TRRAPQ9Y4A5 3859 aa8.31□□□□□ -1.08
KLF3-201ENST00000261438 ANK3Q12955 4377 aaKnown RBP8.28□□□□□ -1.08
KLF3-201ENST00000261438 BSNQ9UPA5 3926 aa8.24□□□□□ -1.09
KLF3-201ENST00000261438 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
KLF3-201ENST00000261438 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
KLF3-201ENST00000261438 VPS13CQ709C8 3753 aa8.14□□□□□ -1.11
KLF3-201ENST00000261438 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
KLF3-201ENST00000261438 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
KLF3-201ENST00000261438 CSMD3Q7Z407 3707 aa7.96□□□□□ -1.14
KLF3-201ENST00000261438 INE1O15225 51 aa7.95□□□□□ -1.14
KLF3-201ENST00000261438 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
KLF3-201ENST00000261438 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
KLF3-201ENST00000261438 AKAP9Q99996 3911 aa7.74□□□□□ -1.17
KLF3-201ENST00000261438 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
KLF3-201ENST00000261438 ALMS1Q8TCU4 4167 aa7.66□□□□□ -1.18
KLF3-201ENST00000261438 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.18
KLF3-201ENST00000261438 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
KLF3-201ENST00000261438 MT1HL1P0DM35 61 aa7.62□□□□□ -1.19
KLF3-201ENST00000261438 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.2
KLF3-201ENST00000261438 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms