RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 K7EQZ3 153 aa13.13□□□□□ -0.31
SIX3-201ENST00000260653 C8orf87E5RJ46 101 aa13.13□□□□□ -0.31
SIX3-201ENST00000260653 KRTAP10-4P60372 401 aaPredicted RBP13.13□□□□□ -0.31
SIX3-201ENST00000260653 PRR26Q8N8Z3 221 aa13.13□□□□□ -0.31
SIX3-201ENST00000260653 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
SIX3-201ENST00000260653 Q96NJ1 140 aa13.08□□□□□ -0.32
SIX3-201ENST00000260653 SNURFQ9Y675 71 aa13.03□□□□□ -0.32
SIX3-201ENST00000260653 HSPG2P98160 4391 aa13.02□□□□□ -0.32
SIX3-201ENST00000260653 TRAV7A0A075B6U4 112 aa13.02□□□□□ -0.33
SIX3-201ENST00000260653 NDUFC1O43677 76 aa13.01□□□□□ -0.33
SIX3-201ENST00000260653 A8MWP4 228 aa13□□□□□ -0.33
SIX3-201ENST00000260653 TYMSOSQ8TAI1 123 aa12.98□□□□□ -0.33
SIX3-201ENST00000260653 CDK2AP2O75956 126 aa12.97□□□□□ -0.33
SIX3-201ENST00000260653 RYR1P21817 5038 aa12.95□□□□□ -0.34
SIX3-201ENST00000260653 HCG22E2RYF7 251 aa12.94□□□□□ -0.34
SIX3-201ENST00000260653 FAM229AH3BQW9 127 aa12.93□□□□□ -0.34
SIX3-201ENST00000260653 EPPK1P58107 5090 aaKnown RBP12.92□□□□□ -0.34
SIX3-201ENST00000260653 WFDC13Q8IUB5 93 aa12.91□□□□□ -0.34
SIX3-201ENST00000260653 NDUFS5O43920 106 aa12.9□□□□□ -0.34
SIX3-201ENST00000260653 NDUFB1O75438 58 aa12.9□□□□□ -0.34
SIX3-201ENST00000260653 Q5VSD8 79 aa12.89□□□□□ -0.35
SIX3-201ENST00000260653 KIAA1109Q2LD37 5005 aa12.87□□□□□ -0.35
SIX3-201ENST00000260653 PKHD1L1Q86WI1 4243 aa12.87□□□□□ -0.35
SIX3-201ENST00000260653 ASB16-AS1Q495Z4 193 aa12.87□□□□□ -0.35
SIX3-201ENST00000260653 Q1T7F1 81 aa12.86□□□□□ -0.35
SIX3-201ENST00000260653 OCR1Q9BZK8 76 aa12.85□□□□□ -0.35
SIX3-201ENST00000260653 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
SIX3-201ENST00000260653 IGHV6-1A0A0B4J1U7 121 aa12.83□□□□□ -0.36
SIX3-201ENST00000260653 MMP24-AS1A0A0U1RRL7 71 aa12.83□□□□□ -0.36
SIX3-201ENST00000260653 A0A1B0GVX0 72 aa12.83□□□□□ -0.36
SIX3-201ENST00000260653 KRTAP17-1Q9BYP8 105 aa12.83□□□□□ -0.36
SIX3-201ENST00000260653 CASC2Q6XLA1 102 aa12.83□□□□□ -0.36
SIX3-201ENST00000260653 LINC00304Q8N9R0 145 aa12.83□□□□□ -0.36
SIX3-201ENST00000260653 LIMD2Q9BT23 127 aa12.82□□□□□ -0.36
SIX3-201ENST00000260653 SPINK1P00995 79 aa12.81□□□□□ -0.36
SIX3-201ENST00000260653 A8MUN3 132 aa12.79□□□□□ -0.36
SIX3-201ENST00000260653 C8orf17Q9NRJ1 99 aa12.78□□□□□ -0.36
SIX3-201ENST00000260653 A8MU10 97 aa12.78□□□□□ -0.36
SIX3-201ENST00000260653 PSPHP1O15172 72 aa12.77□□□□□ -0.37
SIX3-201ENST00000260653 NOTCH2NLQ7Z3S9 236 aa12.76□□□□□ -0.37
SIX3-201ENST00000260653 hDV103S1A0JD37 113 aa12.76□□□□□ -0.37
SIX3-201ENST00000260653 LRP1Q07954 4544 aaKnown RBP12.74□□□□□ -0.37
SIX3-201ENST00000260653 SPAG11AQ6PDA7 123 aa12.73□□□□□ -0.37
SIX3-201ENST00000260653 LCA10Q71F78 164 aa12.72□□□□□ -0.37
SIX3-201ENST00000260653 RPS29P62273 56 aaKnown RBP12.69□□□□□ -0.38
SIX3-201ENST00000260653 TRAV22A0A0B4J277 110 aa12.68□□□□□ -0.38
SIX3-201ENST00000260653 FLG2Q5D862 2391 aaPredicted RBP12.68□□□□□ -0.38
SIX3-201ENST00000260653 C7orf65Q6ZTY9 151 aa12.66□□□□□ -0.38
SIX3-201ENST00000260653 Q8N1X5 172 aa12.66□□□□□ -0.38
SIX3-201ENST00000260653 A6NN06 94 aa12.66□□□□□ -0.38
SIX3-201ENST00000260653 TMEM254Q8TBM7 123 aa12.65□□□□□ -0.38
SIX3-201ENST00000260653 TNXBP22105 4242 aa12.64□□□□□ -0.39
SIX3-201ENST00000260653 SPTSSBQ8NFR3 76 aa12.64□□□□□ -0.39
SIX3-201ENST00000260653 ATP11AUNQ6ZP68 121 aa12.61□□□□□ -0.39
SIX3-201ENST00000260653 MRPL34Q9BQ48 92 aaKnown RBP12.61□□□□□ -0.39
SIX3-201ENST00000260653 FAT3Q8TDW7 4589 aa12.59□□□□□ -0.39
SIX3-201ENST00000260653 LINC00313P59037 77 aa12.58□□□□□ -0.4
SIX3-201ENST00000260653 KRTAP10-8P60410 259 aa12.57□□□□□ -0.4
SIX3-201ENST00000260653 MYCBP2O75592 4640 aa12.57□□□□□ -0.4
SIX3-201ENST00000260653 Q5VV11 94 aa12.53□□□□□ -0.4
SIX3-201ENST00000260653 RETNLBQ9BQ08 111 aa12.51□□□□□ -0.41
SIX3-201ENST00000260653 TP53AIP1Q9HCN2 124 aa12.5□□□□□ -0.41
SIX3-201ENST00000260653 H0Y9P7 68 aa12.5□□□□□ -0.41
SIX3-201ENST00000260653 C1orf64Q8NEQ6 169 aa12.49□□□□□ -0.41
SIX3-201ENST00000260653 MP68P56378 58 aa12.48□□□□□ -0.41
SIX3-201ENST00000260653 DMBT1Q9UGM3 2413 aaPredicted RBP12.47□□□□□ -0.41
SIX3-201ENST00000260653 KRTAP16-1A8MUX0 517 aa12.47□□□□□ -0.41
SIX3-201ENST00000260653 ZCCHC13Q8WW36 166 aaKnown RBP12.46□□□□□ -0.41
SIX3-201ENST00000260653 CHKB-CPT1BH3BT56 60 aa12.45□□□□□ -0.42
SIX3-201ENST00000260653 LINC00208Q96KT6 92 aa12.45□□□□□ -0.42
SIX3-201ENST00000260653 LINC01554Q52M75 96 aa12.44□□□□□ -0.42
SIX3-201ENST00000260653 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
SIX3-201ENST00000260653 Q8N9P0 234 aaPredicted RBP12.42□□□□□ -0.42
SIX3-201ENST00000260653 MT1HL1P0DM35 61 aa12.41□□□□□ -0.42
SIX3-201ENST00000260653 Q5W150 140 aa12.38□□□□□ -0.43
SIX3-201ENST00000260653 H3BPC8 53 aa12.37□□□□□ -0.43
SIX3-201ENST00000260653 C9orf92A6NGG3 77 aa12.35□□□□□ -0.43
SIX3-201ENST00000260653 KRTAP13-3Q3SY46 172 aa12.33□□□□□ -0.44
SIX3-201ENST00000260653 A0A0A0MQY5 61 aa12.31□□□□□ -0.44
SIX3-201ENST00000260653 BIRC6Q9NR09 4857 aa12.3□□□□□ -0.44
SIX3-201ENST00000260653 CYP4F30PQ9H0H9 118 aa12.28□□□□□ -0.44
SIX3-201ENST00000260653 A6NED7 52 aa12.25□□□□□ -0.45
SIX3-201ENST00000260653 CDC42SE1Q9NRR8 79 aa12.25□□□□□ -0.45
SIX3-201ENST00000260653 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
SIX3-201ENST00000260653 PRR15LQ9BU68 103 aa12.22□□□□□ -0.45
SIX3-201ENST00000260653 PRAC1Q96KF2 57 aa12.21□□□□□ -0.45
SIX3-201ENST00000260653 Q75L30 129 aa12.2□□□□□ -0.46
SIX3-201ENST00000260653 HERC2O95714 4834 aa12.2□□□□□ -0.46
SIX3-201ENST00000260653 PCOTHQ58A44 107 aa12.19□□□□□ -0.46
SIX3-201ENST00000260653 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
SIX3-201ENST00000260653 C20orf166-AS1Q96NR2 134 aa12.17□□□□□ -0.46
SIX3-201ENST00000260653 A8MUU9 505 aa12.15□□□□□ -0.46
SIX3-201ENST00000260653 PRR4Q16378 134 aa12.15□□□□□ -0.46
SIX3-201ENST00000260653 IGLV7-46A0A075B6I9 117 aa12.14□□□□□ -0.47
SIX3-201ENST00000260653 IGKV2-30P06310 120 aa12.09□□□□□ -0.47
SIX3-201ENST00000260653 SPANXA2-OT1Q8N9U9 137 aa12.08□□□□□ -0.48
SIX3-201ENST00000260653 IGKV2D-30A0A075B6S6 120 aa12.05□□□□□ -0.48
SIX3-201ENST00000260653 ADM2Q7Z4H4 148 aa12.01□□□□□ -0.49
SIX3-201ENST00000260653 XP32Q5T750 250 aa11.98□□□□□ -0.49
SIX3-201ENST00000260653 J3QL48 77 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms