RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
RC3H1-201ENST00000258349 NBPF19A0A087WUL8 3843 aa2.81□□□□□ -1.96
RC3H1-201ENST00000258349 TGP01266 2768 aa2.81□□□□□ -1.96
RC3H1-201ENST00000258349 DMXL2Q8TDJ6 3036 aa2.8□□□□□ -1.96
RC3H1-201ENST00000258349 PDZD2O15018 2839 aa2.8□□□□□ -1.96
RC3H1-201ENST00000258349 LAMA3Q16787 3333 aa2.8□□□□□ -1.96
RC3H1-201ENST00000258349 TENM3Q9P273 2699 aa2.8□□□□□ -1.96
RC3H1-201ENST00000258349 BOD1L1Q8NFC6 3051 aa2.8□□□□□ -1.96
RC3H1-201ENST00000258349 MXRA5Q9NR99 2828 aa2.8□□□□□ -1.96
RC3H1-201ENST00000258349 FREM2Q5SZK8 3169 aa2.79□□□□□ -1.96
RC3H1-201ENST00000258349 A0A087X002 238 aa2.79□□□□□ -1.96
RC3H1-201ENST00000258349 BRCA2P51587 3418 aa2.79□□□□□ -1.96
RC3H1-201ENST00000258349 DMXL1Q9Y485 3027 aa2.79□□□□□ -1.96
RC3H1-201ENST00000258349 CDH23Q9H251 3354 aa2.79□□□□□ -1.96
RC3H1-201ENST00000258349 KRTAP10-1P60331 282 aa2.78□□□□□ -1.96
RC3H1-201ENST00000258349 DCHS2Q6V1P9 2916 aa2.78□□□□□ -1.96
RC3H1-201ENST00000258349 KRTAP10-2P60368 255 aa2.76□□□□□ -1.97
RC3H1-201ENST00000258349 ADGRG4Q8IZF6 3080 aa2.76□□□□□ -1.97
RC3H1-201ENST00000258349 WDFY3Q8IZQ1 3526 aa2.75□□□□□ -1.97
RC3H1-201ENST00000258349 NOTCH2NLQ7Z3S9 236 aa2.74□□□□□ -1.97
RC3H1-201ENST00000258349 A8MUU9 505 aa2.73□□□□□ -1.97
RC3H1-201ENST00000258349 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
RC3H1-201ENST00000258349 SPENQ96T58 3664 aaKnown RBP2.73□□□□□ -1.97
RC3H1-201ENST00000258349 ATMQ13315 3056 aa2.72□□□□□ -1.97
RC3H1-201ENST00000258349 C20orf166-AS1Q96NR2 134 aa2.72□□□□□ -1.97
RC3H1-201ENST00000258349 CELSR1Q9NYQ6 3014 aa2.71□□□□□ -1.98
RC3H1-201ENST00000258349 UNC80Q8N2C7 3258 aa2.71□□□□□ -1.98
RC3H1-201ENST00000258349 DCHS1Q96JQ0 3298 aa2.71□□□□□ -1.98
RC3H1-201ENST00000258349 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.98
RC3H1-201ENST00000258349 ZFHX3Q15911 3703 aa2.7□□□□□ -1.98
RC3H1-201ENST00000258349 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
RC3H1-201ENST00000258349 VCANP13611 3396 aa2.7□□□□□ -1.98
RC3H1-201ENST00000258349 A8MU10 97 aa2.7□□□□□ -1.98
RC3H1-201ENST00000258349 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
RC3H1-201ENST00000258349 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
RC3H1-201ENST00000258349 SZT2Q5T011 3432 aa2.68□□□□□ -1.98
RC3H1-201ENST00000258349 Q6ZRN7 208 aaPredicted RBP2.68□□□□□ -1.98
RC3H1-201ENST00000258349 VWFP04275 2813 aa2.68□□□□□ -1.98
RC3H1-201ENST00000258349 TENM2Q9NT68 2774 aa2.68□□□□□ -1.98
RC3H1-201ENST00000258349 LAMA5O15230 3695 aa2.68□□□□□ -1.98
RC3H1-201ENST00000258349 VPS13CQ709C8 3753 aa2.68□□□□□ -1.98
RC3H1-201ENST00000258349 KRTAP11-1Q8IUC1 163 aa2.67□□□□□ -1.98
RC3H1-201ENST00000258349 DMDP11532 3685 aa2.67□□□□□ -1.98
RC3H1-201ENST00000258349 TNP1P09430 55 aa2.66□□□□□ -1.98
RC3H1-201ENST00000258349 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
RC3H1-201ENST00000258349 SPEGQ15772 3267 aa2.66□□□□□ -1.98
RC3H1-201ENST00000258349 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.98
RC3H1-201ENST00000258349 KRTAP7-1Q8IUC3 87 aa2.65□□□□□ -1.99
RC3H1-201ENST00000258349 SMG1Q96Q15 3661 aaKnown RBP2.64□□□□□ -1.99
RC3H1-201ENST00000258349 CFAP47Q6ZTR5 3102 aa2.64□□□□□ -1.99
RC3H1-201ENST00000258349 PKD1L1Q8TDX9 2849 aa2.63□□□□□ -1.99
RC3H1-201ENST00000258349 TENM4Q6N022 2769 aa2.62□□□□□ -1.99
RC3H1-201ENST00000258349 ZFHX4Q86UP3 3567 aa2.61□□□□□ -1.99
RC3H1-201ENST00000258349 EYSQ5T1H1 3165 aa2.61□□□□□ -1.99
RC3H1-201ENST00000258349 ASPMQ8IZT6 3477 aa2.61□□□□□ -1.99
RC3H1-201ENST00000258349 H0YAA0 97 aa2.6□□□□□ -1.99
RC3H1-201ENST00000258349 MYO15AQ9UKN7 3530 aa2.6□□□□□ -1.99
RC3H1-201ENST00000258349 COL7A1Q02388 2944 aa2.59□□□□□ -1.99
RC3H1-201ENST00000258349 P0C880 135 aa2.56□□□□□ -2
RC3H1-201ENST00000258349 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
RC3H1-201ENST00000258349 LOC400499M0QZD8 3231 aa2.55□□□□□ -2
RC3H1-201ENST00000258349 RELNP78509 3460 aa2.55□□□□□ -2
RC3H1-201ENST00000258349 CMYA5Q8N3K9 4069 aa2.55□□□□□ -2
RC3H1-201ENST00000258349 CSMD1Q96PZ7 3565 aa2.54□□□□□ -2
RC3H1-201ENST00000258349 XP32Q5T750 250 aa2.54□□□□□ -2
RC3H1-201ENST00000258349 MEGF8Q7Z7M0 2845 aa2.53□□□□□ -2
RC3H1-201ENST00000258349 BSNQ9UPA5 3926 aa2.53□□□□□ -2
RC3H1-201ENST00000258349 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
RC3H1-201ENST00000258349 TPRXLQ17RH7 258 aa2.52□□□□□ -2.01
RC3H1-201ENST00000258349 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
RC3H1-201ENST00000258349 KRTAP21-3Q3LHN1 58 aa2.51□□□□□ -2.01
RC3H1-201ENST00000258349 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
RC3H1-201ENST00000258349 FBN1P35555 2871 aaKnown RBP2.48□□□□□ -2.01
RC3H1-201ENST00000258349 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
RC3H1-201ENST00000258349 ALMS1Q8TCU4 4167 aa2.48□□□□□ -2.01
RC3H1-201ENST00000258349 LYSTQ99698 3801 aa2.46□□□□□ -2.02
RC3H1-201ENST00000258349 DNAH7Q8WXX0 4024 aa2.45□□□□□ -2.02
RC3H1-201ENST00000258349 KRTAP13-3Q3SY46 172 aa2.45□□□□□ -2.02
RC3H1-201ENST00000258349 OTOGQ6ZRI0 2925 aa2.43□□□□□ -2.02
RC3H1-201ENST00000258349 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
RC3H1-201ENST00000258349 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
RC3H1-201ENST00000258349 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
RC3H1-201ENST00000258349 A0A1B0GVY2 172 aa2.42□□□□□ -2.02
RC3H1-201ENST00000258349 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
RC3H1-201ENST00000258349 SVEP1Q4LDE5 3571 aa2.41□□□□□ -2.02
RC3H1-201ENST00000258349 DNAH3Q8TD57 4116 aa2.4□□□□□ -2.02
RC3H1-201ENST00000258349 CSMD2Q7Z408 3487 aa2.38□□□□□ -2.03
RC3H1-201ENST00000258349 ANK2Q01484 3957 aa2.37□□□□□ -2.03
RC3H1-201ENST00000258349 CSMD3Q7Z407 3707 aa2.36□□□□□ -2.03
RC3H1-201ENST00000258349 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
RC3H1-201ENST00000258349 ZNF469Q96JG9 3925 aaPredicted RBP2.32□□□□□ -2.04
RC3H1-201ENST00000258349 FRAS1Q86XX4 4008 aa2.32□□□□□ -2.04
RC3H1-201ENST00000258349 INE1O15225 51 aa2.31□□□□□ -2.04
RC3H1-201ENST00000258349 CUBNO60494 3623 aa2.3□□□□□ -2.04
RC3H1-201ENST00000258349 KRTAP15-1Q3LI76 137 aa2.29□□□□□ -2.04
RC3H1-201ENST00000258349 MUC3AQ02505 3323 aa2.29□□□□□ -2.04
RC3H1-201ENST00000258349 DNAH6Q9C0G6 4158 aa2.26□□□□□ -2.05
RC3H1-201ENST00000258349 KRTAP3-1Q9BYR8 98 aa2.26□□□□□ -2.05
RC3H1-201ENST00000258349 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
RC3H1-201ENST00000258349 KRTAP10-6P60371 365 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms