RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 NDUFS5O43920 106 aa11.55□□□□□ -0.56
FXR2-201ENST00000250113 NDUFB1O75438 58 aa11.55□□□□□ -0.56
FXR2-201ENST00000250113 KRTAP21-3Q3LHN1 58 aa11.54□□□□□ -0.56
FXR2-201ENST00000250113 C1orf195Q5TG92 126 aa11.53□□□□□ -0.56
FXR2-201ENST00000250113 PKHD1P08F94 4074 aa11.52□□□□□ -0.57
FXR2-201ENST00000250113 Q6ZSA8 131 aa11.49□□□□□ -0.57
FXR2-201ENST00000250113 VPS13BQ7Z7G8 4022 aa11.48□□□□□ -0.57
FXR2-201ENST00000250113 V9GYY9 64 aa11.47□□□□□ -0.57
FXR2-201ENST00000250113 SEC61GP60059 68 aa11.47□□□□□ -0.57
FXR2-201ENST00000250113 SACSQ9NZJ4 4579 aa11.47□□□□□ -0.57
FXR2-201ENST00000250113 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
FXR2-201ENST00000250113 C8orf17Q9NRJ1 99 aa11.44□□□□□ -0.58
FXR2-201ENST00000250113 A0A1B0GVX0 72 aa11.42□□□□□ -0.58
FXR2-201ENST00000250113 A8MU10 97 aa11.41□□□□□ -0.58
FXR2-201ENST00000250113 KRTAP13-2Q52LG2 175 aa11.4□□□□□ -0.58
FXR2-201ENST00000250113 A8MUN3 132 aa11.4□□□□□ -0.58
FXR2-201ENST00000250113 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
FXR2-201ENST00000250113 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
FXR2-201ENST00000250113 CD164Q04900 197 aa11.36□□□□□ -0.59
FXR2-201ENST00000250113 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
FXR2-201ENST00000250113 SMR3BP02814 79 aaPredicted RBP11.32□□□□□ -0.6
FXR2-201ENST00000250113 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
FXR2-201ENST00000250113 KRTAP1-4P0C5Y4 121 aa11.31□□□□□ -0.6
FXR2-201ENST00000250113 MRPL34Q9BQ48 92 aaKnown RBP11.29□□□□□ -0.6
FXR2-201ENST00000250113 Q1T7F1 81 aa11.29□□□□□ -0.6
FXR2-201ENST00000250113 Q5W150 140 aa11.29□□□□□ -0.6
FXR2-201ENST00000250113 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
FXR2-201ENST00000250113 COA5Q86WW8 74 aa11.27□□□□□ -0.61
FXR2-201ENST00000250113 DYNC1H1Q14204 4646 aaKnown RBP11.27□□□□□ -0.61
FXR2-201ENST00000250113 PRR15LQ9BU68 103 aa11.23□□□□□ -0.61
FXR2-201ENST00000250113 TP53AIP1Q9HCN2 124 aa11.23□□□□□ -0.61
FXR2-201ENST00000250113 FAT1Q14517 4588 aa11.23□□□□□ -0.61
FXR2-201ENST00000250113 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
FXR2-201ENST00000250113 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
FXR2-201ENST00000250113 H3BPC8 53 aa11.21□□□□□ -0.61
FXR2-201ENST00000250113 PMAIP1Q13794 54 aa11.21□□□□□ -0.61
FXR2-201ENST00000250113 SPAG11AQ6PDA7 123 aa11.21□□□□□ -0.61
FXR2-201ENST00000250113 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.61
FXR2-201ENST00000250113 Q5VV11 94 aa11.19□□□□□ -0.62
FXR2-201ENST00000250113 IGLV7-46A0A075B6I9 117 aa11.19□□□□□ -0.62
FXR2-201ENST00000250113 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
FXR2-201ENST00000250113 CHKB-CPT1BH3BT56 60 aa11.17□□□□□ -0.62
FXR2-201ENST00000250113 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
FXR2-201ENST00000250113 LINC00313P59037 77 aa11.14□□□□□ -0.63
FXR2-201ENST00000250113 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
FXR2-201ENST00000250113 RYR2Q92736 4967 aa11.12□□□□□ -0.63
FXR2-201ENST00000250113 HRES1P13985 223 aa11.12□□□□□ -0.63
FXR2-201ENST00000250113 A0A1B0GVY2 172 aa11.11□□□□□ -0.63
FXR2-201ENST00000250113 APOBP04114 4563 aaKnown RBP11.09□□□□□ -0.63
FXR2-201ENST00000250113 C8orf87E5RJ46 101 aa11.07□□□□□ -0.64
FXR2-201ENST00000250113 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
FXR2-201ENST00000250113 SPTSSBQ8NFR3 76 aa11.04□□□□□ -0.64
FXR2-201ENST00000250113 A6NED7 52 aa11.02□□□□□ -0.65
FXR2-201ENST00000250113 KRTAP13-3Q3SY46 172 aa11.02□□□□□ -0.65
FXR2-201ENST00000250113 SPINK1P00995 79 aa11.01□□□□□ -0.65
FXR2-201ENST00000250113 LINC00304Q8N9R0 145 aa11□□□□□ -0.65
FXR2-201ENST00000250113 LCA10Q71F78 164 aa10.98□□□□□ -0.65
FXR2-201ENST00000250113 KRTAP16-1A8MUX0 517 aa10.97□□□□□ -0.65
FXR2-201ENST00000250113 LOC101927531A0A1B0GV80 90 aa10.96□□□□□ -0.65
FXR2-201ENST00000250113 KRTAP10-4P60372 401 aaPredicted RBP10.95□□□□□ -0.66
FXR2-201ENST00000250113 IGKV2D-30A0A075B6S6 120 aa10.94□□□□□ -0.66
FXR2-201ENST00000250113 IGKV2-30P06310 120 aa10.94□□□□□ -0.66
FXR2-201ENST00000250113 SPINK7P58062 85 aa10.93□□□□□ -0.66
FXR2-201ENST00000250113 FAM229AH3BQW9 127 aa10.91□□□□□ -0.66
FXR2-201ENST00000250113 RYR3Q15413 4870 aa10.87□□□□□ -0.67
FXR2-201ENST00000250113 Q75L30 129 aa10.86□□□□□ -0.67
FXR2-201ENST00000250113 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
FXR2-201ENST00000250113 LINC01558Q9Y6Z2 57 aa10.83□□□□□ -0.68
FXR2-201ENST00000250113 LRP1Q07954 4544 aaKnown RBP10.83□□□□□ -0.68
FXR2-201ENST00000250113 RBM12B-AS1Q9P1G2 102 aa10.79□□□□□ -0.68
FXR2-201ENST00000250113 ACYP2P14621 99 aa10.79□□□□□ -0.68
FXR2-201ENST00000250113 PKHD1L1Q86WI1 4243 aa10.78□□□□□ -0.68
FXR2-201ENST00000250113 RPS29P62273 56 aaKnown RBP10.75□□□□□ -0.69
FXR2-201ENST00000250113 KTN1-AS1Q86SY8 53 aa10.74□□□□□ -0.69
FXR2-201ENST00000250113 Q8N1X5 172 aa10.74□□□□□ -0.69
FXR2-201ENST00000250113 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
FXR2-201ENST00000250113 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
FXR2-201ENST00000250113 HSPG2P98160 4391 aa10.72□□□□□ -0.69
FXR2-201ENST00000250113 C7orf65Q6ZTY9 151 aa10.69□□□□□ -0.7
FXR2-201ENST00000250113 CDC42SE1Q9NRR8 79 aa10.68□□□□□ -0.7
FXR2-201ENST00000250113 Q5VSD8 79 aa10.68□□□□□ -0.7
FXR2-201ENST00000250113 DMBT1Q9UGM3 2413 aaPredicted RBP10.67□□□□□ -0.7
FXR2-201ENST00000250113 KRTAP17-1Q9BYP8 105 aa10.65□□□□□ -0.71
FXR2-201ENST00000250113 KIAA1109Q2LD37 5005 aa10.63□□□□□ -0.71
FXR2-201ENST00000250113 ATP11AUNQ6ZP68 121 aa10.63□□□□□ -0.71
FXR2-201ENST00000250113 A0A1B0GU69 56 aa10.61□□□□□ -0.71
FXR2-201ENST00000250113 A6NN06 94 aa10.6□□□□□ -0.71
FXR2-201ENST00000250113 TNXBP22105 4242 aa10.59□□□□□ -0.71
FXR2-201ENST00000250113 RYR1P21817 5038 aa10.58□□□□□ -0.71
FXR2-201ENST00000250113 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
FXR2-201ENST00000250113 FAT3Q8TDW7 4589 aa10.55□□□□□ -0.72
FXR2-201ENST00000250113 C20orf166-AS1Q96NR2 134 aa10.54□□□□□ -0.72
FXR2-201ENST00000250113 A8MUU9 505 aa10.53□□□□□ -0.72
FXR2-201ENST00000250113 KRTAP10-8P60410 259 aa10.51□□□□□ -0.73
FXR2-201ENST00000250113 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
FXR2-201ENST00000250113 PRAC1Q96KF2 57 aa10.46□□□□□ -0.73
FXR2-201ENST00000250113 ADM2Q7Z4H4 148 aa10.46□□□□□ -0.74
FXR2-201ENST00000250113 MIR22HGQ0VDD5 57 aa10.37□□□□□ -0.75
FXR2-201ENST00000250113 KRTAP3-1Q9BYR8 98 aa10.34□□□□□ -0.75
FXR2-201ENST00000250113 UQCR11O14957 56 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms