RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
RFPL3-201ENST00000249007 COX17Q14061 63 aa7.04□□□□□ -1.28
RFPL3-201ENST00000249007 KRTAP4-8Q9BYQ9 185 aa7.04□□□□□ -1.28
RFPL3-201ENST00000249007 LINC00575Q6W349 94 aa7.04□□□□□ -1.28
RFPL3-201ENST00000249007 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
RFPL3-201ENST00000249007 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
RFPL3-201ENST00000249007 RNASE13Q5GAN3 156 aaKnown RBP7.03□□□□□ -1.28
RFPL3-201ENST00000249007 A0A087X002 238 aa7.01□□□□□ -1.29
RFPL3-201ENST00000249007 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
RFPL3-201ENST00000249007 LCA10Q71F78 164 aa7□□□□□ -1.29
RFPL3-201ENST00000249007 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
RFPL3-201ENST00000249007 COX7BP24311 80 aa6.99□□□□□ -1.29
RFPL3-201ENST00000249007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
RFPL3-201ENST00000249007 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
RFPL3-201ENST00000249007 CAMK2N2Q96S95 79 aa6.99□□□□□ -1.29
RFPL3-201ENST00000249007 IGLV7-46A0A075B6I9 117 aa6.98□□□□□ -1.29
RFPL3-201ENST00000249007 LINC00959A0A1B0GUT2 108 aa6.98□□□□□ -1.29
RFPL3-201ENST00000249007 ZNF73O43830 326 aaPredicted RBP6.98□□□□□ -1.29
RFPL3-201ENST00000249007 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
RFPL3-201ENST00000249007 ASB16-AS1Q495Z4 193 aa6.98□□□□□ -1.29
RFPL3-201ENST00000249007 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
RFPL3-201ENST00000249007 IGHV3OR16-9A0A0B4J2B5 98 aa6.97□□□□□ -1.29
RFPL3-201ENST00000249007 A6NN06 94 aa6.97□□□□□ -1.29
RFPL3-201ENST00000249007 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
RFPL3-201ENST00000249007 Q8IZM0 81 aa6.97□□□□□ -1.29
RFPL3-201ENST00000249007 TYMSOSQ8TAI1 123 aa6.97□□□□□ -1.29
RFPL3-201ENST00000249007 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.3
RFPL3-201ENST00000249007 Q5VV11 94 aa6.96□□□□□ -1.3
RFPL3-201ENST00000249007 Q75L30 129 aa6.96□□□□□ -1.3
RFPL3-201ENST00000249007 Q9BRP9 147 aa6.96□□□□□ -1.3
RFPL3-201ENST00000249007 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
RFPL3-201ENST00000249007 H3BPC8 53 aa6.95□□□□□ -1.3
RFPL3-201ENST00000249007 ZNF861PO60384 105 aa6.93□□□□□ -1.3
RFPL3-201ENST00000249007 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
RFPL3-201ENST00000249007 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
RFPL3-201ENST00000249007 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
RFPL3-201ENST00000249007 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
RFPL3-201ENST00000249007 ETDCA0A1B0GVM5 59 aa6.91□□□□□ -1.3
RFPL3-201ENST00000249007 A8MUN3 132 aa6.9□□□□□ -1.31
RFPL3-201ENST00000249007 PSPHP1O15172 72 aa6.9□□□□□ -1.31
RFPL3-201ENST00000249007 C6orf99Q4VX62 202 aa6.9□□□□□ -1.31
RFPL3-201ENST00000249007 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.31
RFPL3-201ENST00000249007 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
RFPL3-201ENST00000249007 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
RFPL3-201ENST00000249007 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
RFPL3-201ENST00000249007 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
RFPL3-201ENST00000249007 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
RFPL3-201ENST00000249007 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
RFPL3-201ENST00000249007 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
RFPL3-201ENST00000249007 IGLV6-57P01721 117 aa6.87□□□□□ -1.31
RFPL3-201ENST00000249007 TLX1NBP0CAT3 122 aa6.85□□□□□ -1.31
RFPL3-201ENST00000249007 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
RFPL3-201ENST00000249007 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
RFPL3-201ENST00000249007 Q6ZQY7 126 aa6.85□□□□□ -1.31
RFPL3-201ENST00000249007 KCNQ1DNQ9H478 68 aa6.85□□□□□ -1.31
RFPL3-201ENST00000249007 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
RFPL3-201ENST00000249007 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
RFPL3-201ENST00000249007 MT1HP80294 61 aa6.83□□□□□ -1.32
RFPL3-201ENST00000249007 C10orf25Q5T742 122 aa6.83□□□□□ -1.32
RFPL3-201ENST00000249007 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
RFPL3-201ENST00000249007 C6orf48Q9UBA6 75 aa6.82□□□□□ -1.32
RFPL3-201ENST00000249007 MP68P56378 58 aa6.81□□□□□ -1.32
RFPL3-201ENST00000249007 UNQ6190/PRO20217Q6UXQ8 127 aa6.81□□□□□ -1.32
RFPL3-201ENST00000249007 KRTAP13-3Q3SY46 172 aa6.8□□□□□ -1.32
RFPL3-201ENST00000249007 H3BS24 57 aa6.79□□□□□ -1.32
RFPL3-201ENST00000249007 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
RFPL3-201ENST00000249007 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
RFPL3-201ENST00000249007 A6NED7 52 aa6.78□□□□□ -1.32
RFPL3-201ENST00000249007 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
RFPL3-201ENST00000249007 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
RFPL3-201ENST00000249007 SSPOA2VEC9 5147 aa6.77□□□□□ -1.33
RFPL3-201ENST00000249007 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.33
RFPL3-201ENST00000249007 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
RFPL3-201ENST00000249007 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
RFPL3-201ENST00000249007 USH2AO75445 5202 aa6.75□□□□□ -1.33
RFPL3-201ENST00000249007 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
RFPL3-201ENST00000249007 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
RFPL3-201ENST00000249007 MOBPQ13875 183 aa6.73□□□□□ -1.33
RFPL3-201ENST00000249007 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
RFPL3-201ENST00000249007 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
RFPL3-201ENST00000249007 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
RFPL3-201ENST00000249007 M0R2T5 61 aa6.69□□□□□ -1.34
RFPL3-201ENST00000249007 Q8N9L7 120 aa6.69□□□□□ -1.34
RFPL3-201ENST00000249007 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
RFPL3-201ENST00000249007 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
RFPL3-201ENST00000249007 XAGE1AQ9HD64 81 aa6.68□□□□□ -1.34
RFPL3-201ENST00000249007 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
RFPL3-201ENST00000249007 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
RFPL3-201ENST00000249007 Q8NBF4 154 aa6.66□□□□□ -1.34
RFPL3-201ENST00000249007 A8MU10 97 aa6.66□□□□□ -1.34
RFPL3-201ENST00000249007 DSCR10P59022 87 aa6.65□□□□□ -1.35
RFPL3-201ENST00000249007 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.35
RFPL3-201ENST00000249007 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
RFPL3-201ENST00000249007 DHRS4-AS1Q9P1J3 65 aa6.63□□□□□ -1.35
RFPL3-201ENST00000249007 COA5Q86WW8 74 aa6.62□□□□□ -1.35
RFPL3-201ENST00000249007 Q8NDZ9 215 aa6.62□□□□□ -1.35
RFPL3-201ENST00000249007 FLGP20930 4061 aaPredicted RBP6.62□□□□□ -1.35
RFPL3-201ENST00000249007 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
RFPL3-201ENST00000249007 LINC00313P59037 77 aa6.61□□□□□ -1.35
RFPL3-201ENST00000249007 PRLHP81277 87 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms