RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 A0A1B0GVX0 72 aa8.57□□□□□ -1.04
HIF3A-202ENST00000244303 TGP01266 2768 aa8.57□□□□□ -1.04
HIF3A-202ENST00000244303 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
HIF3A-202ENST00000244303 A8MU10 97 aa8.55□□□□□ -1.04
HIF3A-202ENST00000244303 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
HIF3A-202ENST00000244303 COA5Q86WW8 74 aa8.55□□□□□ -1.04
HIF3A-202ENST00000244303 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
HIF3A-202ENST00000244303 DNAH6Q9C0G6 4158 aa8.54□□□□□ -1.04
HIF3A-202ENST00000244303 CDK2AP2O75956 126 aa8.54□□□□□ -1.04
HIF3A-202ENST00000244303 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
HIF3A-202ENST00000244303 NDUFS5O43920 106 aa8.52□□□□□ -1.04
HIF3A-202ENST00000244303 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
HIF3A-202ENST00000244303 A0A087X002 238 aa8.51□□□□□ -1.05
HIF3A-202ENST00000244303 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
HIF3A-202ENST00000244303 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
HIF3A-202ENST00000244303 DNAH5Q8TE73 4624 aa8.5□□□□□ -1.05
HIF3A-202ENST00000244303 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
HIF3A-202ENST00000244303 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
HIF3A-202ENST00000244303 A6NED7 52 aa8.49□□□□□ -1.05
HIF3A-202ENST00000244303 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
HIF3A-202ENST00000244303 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
HIF3A-202ENST00000244303 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
HIF3A-202ENST00000244303 CD164Q04900 197 aa8.47□□□□□ -1.05
HIF3A-202ENST00000244303 Q75L30 129 aa8.47□□□□□ -1.05
HIF3A-202ENST00000244303 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
HIF3A-202ENST00000244303 LOC101927531A0A1B0GV80 90 aa8.44□□□□□ -1.06
HIF3A-202ENST00000244303 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
HIF3A-202ENST00000244303 LCA10Q71F78 164 aa8.41□□□□□ -1.06
HIF3A-202ENST00000244303 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.07
HIF3A-202ENST00000244303 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
HIF3A-202ENST00000244303 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
HIF3A-202ENST00000244303 PKD1P98161 4303 aa8.38□□□□□ -1.07
HIF3A-202ENST00000244303 LINC01558Q9Y6Z2 57 aa8.37□□□□□ -1.07
HIF3A-202ENST00000244303 Q5W150 140 aa8.37□□□□□ -1.07
HIF3A-202ENST00000244303 Q6ZSA8 131 aa8.36□□□□□ -1.07
HIF3A-202ENST00000244303 HRES1P13985 223 aa8.36□□□□□ -1.07
HIF3A-202ENST00000244303 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
HIF3A-202ENST00000244303 KTN1-AS1Q86SY8 53 aa8.35□□□□□ -1.07
HIF3A-202ENST00000244303 KRTAP13-3Q3SY46 172 aa8.34□□□□□ -1.07
HIF3A-202ENST00000244303 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.07
HIF3A-202ENST00000244303 HYDINQ4G0P3 5121 aa8.34□□□□□ -1.07
HIF3A-202ENST00000244303 FAT2Q9NYQ8 4349 aa8.33□□□□□ -1.08
HIF3A-202ENST00000244303 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
HIF3A-202ENST00000244303 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
HIF3A-202ENST00000244303 LINC00313P59037 77 aa8.28□□□□□ -1.08
HIF3A-202ENST00000244303 VPS13BQ7Z7G8 4022 aa8.28□□□□□ -1.08
HIF3A-202ENST00000244303 A6NN06 94 aa8.28□□□□□ -1.08
HIF3A-202ENST00000244303 SPINK7P58062 85 aa8.28□□□□□ -1.08
HIF3A-202ENST00000244303 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
HIF3A-202ENST00000244303 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
HIF3A-202ENST00000244303 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
HIF3A-202ENST00000244303 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
HIF3A-202ENST00000244303 FAM229AH3BQW9 127 aa8.21□□□□□ -1.1
HIF3A-202ENST00000244303 ACYP2P14621 99 aa8.21□□□□□ -1.1
HIF3A-202ENST00000244303 C7orf65Q6ZTY9 151 aa8.19□□□□□ -1.1
HIF3A-202ENST00000244303 KRTAP16-1A8MUX0 517 aa8.18□□□□□ -1.1
HIF3A-202ENST00000244303 IGKV2-30P06310 120 aa8.15□□□□□ -1.1
HIF3A-202ENST00000244303 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
HIF3A-202ENST00000244303 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
HIF3A-202ENST00000244303 PKHD1P08F94 4074 aa8.14□□□□□ -1.11
HIF3A-202ENST00000244303 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
HIF3A-202ENST00000244303 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
HIF3A-202ENST00000244303 SACSQ9NZJ4 4579 aa8.11□□□□□ -1.11
HIF3A-202ENST00000244303 A0A1B0GU69 56 aa8.09□□□□□ -1.11
HIF3A-202ENST00000244303 SPINK1P00995 79 aa8.08□□□□□ -1.12
HIF3A-202ENST00000244303 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
HIF3A-202ENST00000244303 A0A1B0GVY2 172 aa8.06□□□□□ -1.12
HIF3A-202ENST00000244303 SMR3BP02814 79 aaPredicted RBP8.04□□□□□ -1.12
HIF3A-202ENST00000244303 LINC00304Q8N9R0 145 aa8□□□□□ -1.13
HIF3A-202ENST00000244303 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
HIF3A-202ENST00000244303 PRAC1Q96KF2 57 aa7.96□□□□□ -1.13
HIF3A-202ENST00000244303 MIR22HGQ0VDD5 57 aa7.96□□□□□ -1.14
HIF3A-202ENST00000244303 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
HIF3A-202ENST00000244303 UQCR11O14957 56 aa7.95□□□□□ -1.14
HIF3A-202ENST00000244303 RPS29P62273 56 aaKnown RBP7.95□□□□□ -1.14
HIF3A-202ENST00000244303 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
HIF3A-202ENST00000244303 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
HIF3A-202ENST00000244303 RYR2Q92736 4967 aa7.92□□□□□ -1.14
HIF3A-202ENST00000244303 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
HIF3A-202ENST00000244303 FAT1Q14517 4588 aa7.91□□□□□ -1.14
HIF3A-202ENST00000244303 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
HIF3A-202ENST00000244303 Q8N1X5 172 aa7.87□□□□□ -1.15
HIF3A-202ENST00000244303 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
HIF3A-202ENST00000244303 A8MUU9 505 aa7.81□□□□□ -1.16
HIF3A-202ENST00000244303 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
HIF3A-202ENST00000244303 KMT2CQ8NEZ4 4911 aaKnown RBP7.81□□□□□ -1.16
HIF3A-202ENST00000244303 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
HIF3A-202ENST00000244303 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
HIF3A-202ENST00000244303 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.18
HIF3A-202ENST00000244303 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
HIF3A-202ENST00000244303 Q5VSD8 79 aa7.67□□□□□ -1.18
HIF3A-202ENST00000244303 TNXBP22105 4242 aa7.65□□□□□ -1.19
HIF3A-202ENST00000244303 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.19
HIF3A-202ENST00000244303 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
HIF3A-202ENST00000244303 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
HIF3A-202ENST00000244303 RYR3Q15413 4870 aa7.6□□□□□ -1.19
HIF3A-202ENST00000244303 H0YAA0 97 aa7.6□□□□□ -1.19
HIF3A-202ENST00000244303 HSPG2P98160 4391 aa7.59□□□□□ -1.19
HIF3A-202ENST00000244303 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
HIF3A-202ENST00000244303 A0A1B0GU33 70 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms