RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 CASC2Q6XLA1 102 aa13□□□□□ -0.33
RNF170-201ENST00000240159 C1orf195Q5TG92 126 aa13□□□□□ -0.33
RNF170-201ENST00000240159 IGHV6-1A0A0B4J1U7 121 aa12.99□□□□□ -0.33
RNF170-201ENST00000240159 KRTAP17-1Q9BYP8 105 aa12.97□□□□□ -0.33
RNF170-201ENST00000240159 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
RNF170-201ENST00000240159 TMEM258P61165 79 aa12.96□□□□□ -0.33
RNF170-201ENST00000240159 SPAG11AQ6PDA7 123 aa12.96□□□□□ -0.33
RNF170-201ENST00000240159 C20orf197Q8N268 126 aa12.96□□□□□ -0.33
RNF170-201ENST00000240159 C8orf17Q9NRJ1 99 aa12.96□□□□□ -0.33
RNF170-201ENST00000240159 hDV103S1A0JD37 113 aa12.93□□□□□ -0.34
RNF170-201ENST00000240159 RPS29P62273 56 aaKnown RBP12.93□□□□□ -0.34
RNF170-201ENST00000240159 KIAA1109Q2LD37 5005 aa12.92□□□□□ -0.34
RNF170-201ENST00000240159 NOTCH2NLQ7Z3S9 236 aa12.91□□□□□ -0.34
RNF170-201ENST00000240159 Q8N1X5 172 aa12.87□□□□□ -0.35
RNF170-201ENST00000240159 KLKP1Q107X0 134 aa12.84□□□□□ -0.35
RNF170-201ENST00000240159 C8orf87E5RJ46 101 aa12.82□□□□□ -0.36
RNF170-201ENST00000240159 TMEM254Q8TBM7 123 aa12.82□□□□□ -0.36
RNF170-201ENST00000240159 MRPL34Q9BQ48 92 aaKnown RBP12.81□□□□□ -0.36
RNF170-201ENST00000240159 SNURFQ9Y675 71 aa12.81□□□□□ -0.36
RNF170-201ENST00000240159 H7BZZ5 65 aa12.79□□□□□ -0.36
RNF170-201ENST00000240159 KRTAP10-8P60410 259 aa12.79□□□□□ -0.36
RNF170-201ENST00000240159 RPS28P62857 69 aaKnown RBP12.79□□□□□ -0.36
RNF170-201ENST00000240159 LRP1Q07954 4544 aaKnown RBP12.78□□□□□ -0.36
RNF170-201ENST00000240159 LINC00313P59037 77 aa12.77□□□□□ -0.37
RNF170-201ENST00000240159 C5orf47Q569G3 176 aa12.77□□□□□ -0.37
RNF170-201ENST00000240159 A0A0U1RQV1 116 aa12.76□□□□□ -0.37
RNF170-201ENST00000240159 SVIPQ8NHG7 77 aa12.74□□□□□ -0.37
RNF170-201ENST00000240159 FAM236DA0A1B0GTK5 79 aa12.72□□□□□ -0.37
RNF170-201ENST00000240159 FAM236CP0DP71 79 aa12.72□□□□□ -0.37
RNF170-201ENST00000240159 NDUFS5O43920 106 aa12.72□□□□□ -0.37
RNF170-201ENST00000240159 TP53AIP1Q9HCN2 124 aa12.72□□□□□ -0.37
RNF170-201ENST00000240159 TNXBP22105 4242 aa12.71□□□□□ -0.37
RNF170-201ENST00000240159 NDUFC1O43677 76 aa12.69□□□□□ -0.38
RNF170-201ENST00000240159 FAT3Q8TDW7 4589 aa12.69□□□□□ -0.38
RNF170-201ENST00000240159 MP68P56378 58 aa12.67□□□□□ -0.38
RNF170-201ENST00000240159 H0Y9P7 68 aa12.66□□□□□ -0.38
RNF170-201ENST00000240159 KRTAP16-1A8MUX0 517 aa12.66□□□□□ -0.38
RNF170-201ENST00000240159 ZCCHC13Q8WW36 166 aaKnown RBP12.65□□□□□ -0.38
RNF170-201ENST00000240159 FLG2Q5D862 2391 aaPredicted RBP12.65□□□□□ -0.38
RNF170-201ENST00000240159 TRAV22A0A0B4J277 110 aa12.64□□□□□ -0.39
RNF170-201ENST00000240159 OXTP01178 125 aa12.64□□□□□ -0.39
RNF170-201ENST00000240159 RETNLBQ9BQ08 111 aa12.63□□□□□ -0.39
RNF170-201ENST00000240159 Q8N9P0 234 aaPredicted RBP12.62□□□□□ -0.39
RNF170-201ENST00000240159 LINC00208Q96KT6 92 aa12.61□□□□□ -0.39
RNF170-201ENST00000240159 MT1HL1P0DM35 61 aa12.59□□□□□ -0.39
RNF170-201ENST00000240159 H3BPC8 53 aa12.59□□□□□ -0.39
RNF170-201ENST00000240159 KRTAP4-5Q9BYR2 181 aa12.57□□□□□ -0.4
RNF170-201ENST00000240159 MYCBP2O75592 4640 aa12.56□□□□□ -0.4
RNF170-201ENST00000240159 SERP1Q9Y6X1 66 aa12.56□□□□□ -0.4
RNF170-201ENST00000240159 ATP5EP56381 51 aaPredicted RBP12.55□□□□□ -0.4
RNF170-201ENST00000240159 C1orf64Q8NEQ6 169 aa12.54□□□□□ -0.4
RNF170-201ENST00000240159 Q5W150 140 aa12.54□□□□□ -0.4
RNF170-201ENST00000240159 KRTAP13-3Q3SY46 172 aa12.51□□□□□ -0.41
RNF170-201ENST00000240159 C9orf92A6NGG3 77 aa12.49□□□□□ -0.41
RNF170-201ENST00000240159 DMBT1Q9UGM3 2413 aaPredicted RBP12.45□□□□□ -0.42
RNF170-201ENST00000240159 FP248Q71RG6 208 aaPredicted RBP12.42□□□□□ -0.42
RNF170-201ENST00000240159 BIRC6Q9NR09 4857 aa12.41□□□□□ -0.42
RNF170-201ENST00000240159 LOC101927531A0A1B0GV80 90 aa12.38□□□□□ -0.43
RNF170-201ENST00000240159 C20orf166-AS1Q96NR2 134 aa12.37□□□□□ -0.43
RNF170-201ENST00000240159 A8MUU9 505 aa12.35□□□□□ -0.43
RNF170-201ENST00000240159 PCOTHQ58A44 107 aa12.33□□□□□ -0.44
RNF170-201ENST00000240159 IGLV7-46A0A075B6I9 117 aa12.32□□□□□ -0.44
RNF170-201ENST00000240159 HERC2O95714 4834 aa12.32□□□□□ -0.44
RNF170-201ENST00000240159 SMIM26A0A096LP01 95 aa12.32□□□□□ -0.44
RNF170-201ENST00000240159 C4orf26Q17RF5 130 aa12.31□□□□□ -0.44
RNF170-201ENST00000240159 CYP4F30PQ9H0H9 118 aa12.31□□□□□ -0.44
RNF170-201ENST00000240159 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
RNF170-201ENST00000240159 IGKV2-30P06310 120 aa12.28□□□□□ -0.44
RNF170-201ENST00000240159 SPANXA2-OT1Q8N9U9 137 aa12.28□□□□□ -0.44
RNF170-201ENST00000240159 PRR4Q16378 134 aa12.26□□□□□ -0.45
RNF170-201ENST00000240159 Q75L30 129 aa12.23□□□□□ -0.45
RNF170-201ENST00000240159 IGKV2D-30A0A075B6S6 120 aa12.2□□□□□ -0.46
RNF170-201ENST00000240159 XP32Q5T750 250 aa12.15□□□□□ -0.47
RNF170-201ENST00000240159 J3QL48 77 aa12.14□□□□□ -0.47
RNF170-201ENST00000240159 HRES1P13985 223 aa12.13□□□□□ -0.47
RNF170-201ENST00000240159 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
RNF170-201ENST00000240159 RPL37P61927 97 aaKnown RBP12.1□□□□□ -0.47
RNF170-201ENST00000240159 MPLKIPQ8TAP9 179 aa12.08□□□□□ -0.48
RNF170-201ENST00000240159 TPRXLQ17RH7 258 aa12.06□□□□□ -0.48
RNF170-201ENST00000240159 ATP11AUNQ6ZP68 121 aa12.04□□□□□ -0.48
RNF170-201ENST00000240159 SPINK7P58062 85 aa11.99□□□□□ -0.49
RNF170-201ENST00000240159 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
RNF170-201ENST00000240159 COA5Q86WW8 74 aa11.94□□□□□ -0.5
RNF170-201ENST00000240159 Q1T7F1 81 aa11.93□□□□□ -0.5
RNF170-201ENST00000240159 ACYP2P14621 99 aa11.89□□□□□ -0.51
RNF170-201ENST00000240159 LPAP08519 4548 aa11.87□□□□□ -0.51
RNF170-201ENST00000240159 LRP2P98164 4655 aa11.83□□□□□ -0.52
RNF170-201ENST00000240159 V9GYY9 64 aa11.8□□□□□ -0.52
RNF170-201ENST00000240159 PRO0628Q9UI54 55 aa11.79□□□□□ -0.52
RNF170-201ENST00000240159 PCLOQ9Y6V0 5065 aa11.79□□□□□ -0.52
RNF170-201ENST00000240159 BRK1Q8WUW1 75 aa11.77□□□□□ -0.53
RNF170-201ENST00000240159 A8MUN3 132 aa11.76□□□□□ -0.53
RNF170-201ENST00000240159 PSPHP1O15172 72 aa11.76□□□□□ -0.53
RNF170-201ENST00000240159 KRTAP3-1Q9BYR8 98 aa11.73□□□□□ -0.53
RNF170-201ENST00000240159 CHKB-CPT1BH3BT56 60 aa11.7□□□□□ -0.54
RNF170-201ENST00000240159 COX6B2Q6YFQ2 88 aa11.69□□□□□ -0.54
RNF170-201ENST00000240159 SEC61BP60468 96 aaKnown RBP11.63□□□□□ -0.55
RNF170-201ENST00000240159 Q5VV11 94 aa11.61□□□□□ -0.55
RNF170-201ENST00000240159 PRR15LQ9BU68 103 aa11.6□□□□□ -0.55
RNF170-201ENST00000240159 HERC1Q15751 4861 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms