RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 HIVEP1P15822 2718 aa5.6□□□□□ -1.51
NUDCD1-201ENST00000239690 PANO1I0J062 215 aa5.59□□□□□ -1.51
NUDCD1-201ENST00000239690 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
NUDCD1-201ENST00000239690 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
NUDCD1-201ENST00000239690 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
NUDCD1-201ENST00000239690 ROMO1P60602 79 aa5.55□□□□□ -1.52
NUDCD1-201ENST00000239690 MXRA5Q9NR99 2828 aa5.54□□□□□ -1.52
NUDCD1-201ENST00000239690 ITPR2Q14571 2701 aa5.53□□□□□ -1.52
NUDCD1-201ENST00000239690 DCHS2Q6V1P9 2916 aa5.53□□□□□ -1.52
NUDCD1-201ENST00000239690 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
NUDCD1-201ENST00000239690 KRTAP13-1Q8IUC0 172 aa5.53□□□□□ -1.52
NUDCD1-201ENST00000239690 ZFHX4Q86UP3 3567 aa5.48□□□□□ -1.53
NUDCD1-201ENST00000239690 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
NUDCD1-201ENST00000239690 ASPMQ8IZT6 3477 aa5.47□□□□□ -1.53
NUDCD1-201ENST00000239690 CSMD1Q96PZ7 3565 aa5.45□□□□□ -1.54
NUDCD1-201ENST00000239690 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
NUDCD1-201ENST00000239690 LAMA5O15230 3695 aa5.44□□□□□ -1.54
NUDCD1-201ENST00000239690 CRYBG3Q68DQ2 2970 aa5.43□□□□□ -1.54
NUDCD1-201ENST00000239690 KMT2BQ9UMN6 2715 aaPredicted RBP5.41□□□□□ -1.54
NUDCD1-201ENST00000239690 RELNP78509 3460 aa5.4□□□□□ -1.55
NUDCD1-201ENST00000239690 A8MUU9 505 aa5.39□□□□□ -1.55
NUDCD1-201ENST00000239690 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
NUDCD1-201ENST00000239690 Q6ZRN7 208 aaPredicted RBP5.39□□□□□ -1.55
NUDCD1-201ENST00000239690 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
NUDCD1-201ENST00000239690 SMG1Q96Q15 3661 aaKnown RBP5.38□□□□□ -1.55
NUDCD1-201ENST00000239690 S4R3F8 94 aa5.37□□□□□ -1.55
NUDCD1-201ENST00000239690 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
NUDCD1-201ENST00000239690 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
NUDCD1-201ENST00000239690 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-201ENST00000239690 Q6ZSA8 131 aa5.35□□□□□ -1.55
NUDCD1-201ENST00000239690 CELSR1Q9NYQ6 3014 aa5.34□□□□□ -1.55
NUDCD1-201ENST00000239690 TENM3Q9P273 2699 aa5.33□□□□□ -1.56
NUDCD1-201ENST00000239690 KRTAP13-2Q52LG2 175 aa5.33□□□□□ -1.56
NUDCD1-201ENST00000239690 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
NUDCD1-201ENST00000239690 BSNQ9UPA5 3926 aa5.31□□□□□ -1.56
NUDCD1-201ENST00000239690 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
NUDCD1-201ENST00000239690 H0YAA0 97 aa5.3□□□□□ -1.56
NUDCD1-201ENST00000239690 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
NUDCD1-201ENST00000239690 CAMK2N1Q7Z7J9 78 aa5.25□□□□□ -1.57
NUDCD1-201ENST00000239690 TGP01266 2768 aa5.25□□□□□ -1.57
NUDCD1-201ENST00000239690 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
NUDCD1-201ENST00000239690 PDZD2O15018 2839 aa5.24□□□□□ -1.57
NUDCD1-201ENST00000239690 R4GN34 69 aa5.24□□□□□ -1.57
NUDCD1-201ENST00000239690 SVEP1Q4LDE5 3571 aa5.23□□□□□ -1.57
NUDCD1-201ENST00000239690 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
NUDCD1-201ENST00000239690 VWFP04275 2813 aa5.18□□□□□ -1.58
NUDCD1-201ENST00000239690 M0QZ58 72 aa5.18□□□□□ -1.58
NUDCD1-201ENST00000239690 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
NUDCD1-201ENST00000239690 CUBNO60494 3623 aa5.16□□□□□ -1.58
NUDCD1-201ENST00000239690 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.58
NUDCD1-201ENST00000239690 TENM4Q6N022 2769 aa5.14□□□□□ -1.59
NUDCD1-201ENST00000239690 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
NUDCD1-201ENST00000239690 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
NUDCD1-201ENST00000239690 SRRM2Q9UQ35 2752 aaKnown RBP5.07□□□□□ -1.6
NUDCD1-201ENST00000239690 P0C880 135 aa5.05□□□□□ -1.6
NUDCD1-201ENST00000239690 J3QL48 77 aa5.01□□□□□ -1.61
NUDCD1-201ENST00000239690 PLAC4Q8WY50 150 aa5□□□□□ -1.61
NUDCD1-201ENST00000239690 FBN1P35555 2871 aaKnown RBP5□□□□□ -1.61
NUDCD1-201ENST00000239690 VPS13CQ709C8 3753 aa4.97□□□□□ -1.61
NUDCD1-201ENST00000239690 Q5VSD8 79 aa4.96□□□□□ -1.62
NUDCD1-201ENST00000239690 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
NUDCD1-201ENST00000239690 TENM2Q9NT68 2774 aa4.95□□□□□ -1.62
NUDCD1-201ENST00000239690 ZFHX3Q15911 3703 aa4.95□□□□□ -1.62
NUDCD1-201ENST00000239690 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
NUDCD1-201ENST00000239690 CSMD2Q7Z408 3487 aa4.93□□□□□ -1.62
NUDCD1-201ENST00000239690 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
NUDCD1-201ENST00000239690 FBN3Q75N90 2809 aa4.9□□□□□ -1.63
NUDCD1-201ENST00000239690 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
NUDCD1-201ENST00000239690 OTOGQ6ZRI0 2925 aa4.89□□□□□ -1.63
NUDCD1-201ENST00000239690 KRTAP12-2P59991 146 aa4.85□□□□□ -1.63
NUDCD1-201ENST00000239690 XP32Q5T750 250 aa4.85□□□□□ -1.63
NUDCD1-201ENST00000239690 NBPF19A0A087WUL8 3843 aa4.84□□□□□ -1.63
NUDCD1-201ENST00000239690 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
NUDCD1-201ENST00000239690 TNP1P09430 55 aa4.83□□□□□ -1.64
NUDCD1-201ENST00000239690 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
NUDCD1-201ENST00000239690 ZNF469Q96JG9 3925 aaPredicted RBP4.81□□□□□ -1.64
NUDCD1-201ENST00000239690 ANK3Q12955 4377 aaKnown RBP4.8□□□□□ -1.64
NUDCD1-201ENST00000239690 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
NUDCD1-201ENST00000239690 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
NUDCD1-201ENST00000239690 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
NUDCD1-201ENST00000239690 COL7A1Q02388 2944 aa4.78□□□□□ -1.64
NUDCD1-201ENST00000239690 M0R2T5 61 aa4.77□□□□□ -1.65
NUDCD1-201ENST00000239690 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
NUDCD1-201ENST00000239690 TRRAPQ9Y4A5 3859 aa4.76□□□□□ -1.65
NUDCD1-201ENST00000239690 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
NUDCD1-201ENST00000239690 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
NUDCD1-201ENST00000239690 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
NUDCD1-201ENST00000239690 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
NUDCD1-201ENST00000239690 A0A1B0GVY2 172 aa4.48□□□□□ -1.69
NUDCD1-201ENST00000239690 HUWE1Q7Z6Z7 4374 aaKnown RBP4.42□□□□□ -1.7
NUDCD1-201ENST00000239690 KRTAP21-3Q3LHN1 58 aa4.41□□□□□ -1.7
NUDCD1-201ENST00000239690 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
NUDCD1-201ENST00000239690 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
NUDCD1-201ENST00000239690 DNAH3Q8TD57 4116 aa4.35□□□□□ -1.71
NUDCD1-201ENST00000239690 ANK2Q01484 3957 aa4.34□□□□□ -1.72
NUDCD1-201ENST00000239690 INE1O15225 51 aa4.33□□□□□ -1.72
NUDCD1-201ENST00000239690 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
NUDCD1-201ENST00000239690 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
NUDCD1-201ENST00000239690 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
NUDCD1-201ENST00000239690 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms