RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 KMT2BQ9UMN6 2715 aaPredicted RBP6.56□□□□□ -1.36
CCDC170-201ENST00000239374 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
CCDC170-201ENST00000239374 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
CCDC170-201ENST00000239374 TENM3Q9P273 2699 aa6.55□□□□□ -1.36
CCDC170-201ENST00000239374 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
CCDC170-201ENST00000239374 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
CCDC170-201ENST00000239374 A6NN06 94 aa6.53□□□□□ -1.36
CCDC170-201ENST00000239374 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
CCDC170-201ENST00000239374 VWFP04275 2813 aa6.51□□□□□ -1.37
CCDC170-201ENST00000239374 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
CCDC170-201ENST00000239374 TENM1Q9UKZ4 2725 aa6.48□□□□□ -1.37
CCDC170-201ENST00000239374 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
CCDC170-201ENST00000239374 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
CCDC170-201ENST00000239374 SMR3BP02814 79 aaPredicted RBP6.46□□□□□ -1.38
CCDC170-201ENST00000239374 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
CCDC170-201ENST00000239374 KRTAP13-1Q8IUC0 172 aa6.45□□□□□ -1.38
CCDC170-201ENST00000239374 A0A1B0GU33 70 aa6.45□□□□□ -1.38
CCDC170-201ENST00000239374 PDZD2O15018 2839 aa6.43□□□□□ -1.38
CCDC170-201ENST00000239374 A0A0D9SG42 100 aa6.41□□□□□ -1.38
CCDC170-201ENST00000239374 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
CCDC170-201ENST00000239374 CSMD2Q7Z408 3487 aa6.4□□□□□ -1.39
CCDC170-201ENST00000239374 Q6ZRN7 208 aaPredicted RBP6.4□□□□□ -1.39
CCDC170-201ENST00000239374 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.39
CCDC170-201ENST00000239374 H3BS24 57 aa6.38□□□□□ -1.39
CCDC170-201ENST00000239374 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
CCDC170-201ENST00000239374 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
CCDC170-201ENST00000239374 FLG2Q5D862 2391 aaPredicted RBP6.35□□□□□ -1.39
CCDC170-201ENST00000239374 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
CCDC170-201ENST00000239374 TENM4Q6N022 2769 aa6.34□□□□□ -1.39
CCDC170-201ENST00000239374 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
CCDC170-201ENST00000239374 FBN1P35555 2871 aaKnown RBP6.32□□□□□ -1.4
CCDC170-201ENST00000239374 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
CCDC170-201ENST00000239374 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
CCDC170-201ENST00000239374 NBPF19A0A087WUL8 3843 aa6.27□□□□□ -1.41
CCDC170-201ENST00000239374 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
CCDC170-201ENST00000239374 KRTAP21-3Q3LHN1 58 aa6.24□□□□□ -1.41
CCDC170-201ENST00000239374 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
CCDC170-201ENST00000239374 VPS13CQ709C8 3753 aa6.22□□□□□ -1.41
CCDC170-201ENST00000239374 ZFHX3Q15911 3703 aa6.21□□□□□ -1.41
CCDC170-201ENST00000239374 TGP01266 2768 aa6.2□□□□□ -1.42
CCDC170-201ENST00000239374 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
CCDC170-201ENST00000239374 J3QL48 77 aa6.18□□□□□ -1.42
CCDC170-201ENST00000239374 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
CCDC170-201ENST00000239374 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
CCDC170-201ENST00000239374 ROMO1P60602 79 aa6.15□□□□□ -1.43
CCDC170-201ENST00000239374 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
CCDC170-201ENST00000239374 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
CCDC170-201ENST00000239374 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
CCDC170-201ENST00000239374 S4R3F8 94 aa6.11□□□□□ -1.43
CCDC170-201ENST00000239374 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
CCDC170-201ENST00000239374 Q6ZSA8 131 aa6.07□□□□□ -1.44
CCDC170-201ENST00000239374 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
CCDC170-201ENST00000239374 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
CCDC170-201ENST00000239374 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
CCDC170-201ENST00000239374 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
CCDC170-201ENST00000239374 H0YAA0 97 aa6.01□□□□□ -1.45
CCDC170-201ENST00000239374 A8MUU9 505 aa5.99□□□□□ -1.45
CCDC170-201ENST00000239374 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
CCDC170-201ENST00000239374 ZNF469Q96JG9 3925 aaPredicted RBP5.96□□□□□ -1.46
CCDC170-201ENST00000239374 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
CCDC170-201ENST00000239374 R4GN34 69 aa5.92□□□□□ -1.46
CCDC170-201ENST00000239374 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
CCDC170-201ENST00000239374 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
CCDC170-201ENST00000239374 COL7A1Q02388 2944 aa5.89□□□□□ -1.47
CCDC170-201ENST00000239374 Q5VSD8 79 aa5.88□□□□□ -1.47
CCDC170-201ENST00000239374 M0QZ58 72 aa5.88□□□□□ -1.47
CCDC170-201ENST00000239374 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
CCDC170-201ENST00000239374 AKAP9Q99996 3911 aa5.84□□□□□ -1.47
CCDC170-201ENST00000239374 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
CCDC170-201ENST00000239374 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
CCDC170-201ENST00000239374 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
CCDC170-201ENST00000239374 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
CCDC170-201ENST00000239374 P0C880 135 aa5.7□□□□□ -1.5
CCDC170-201ENST00000239374 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
CCDC170-201ENST00000239374 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
CCDC170-201ENST00000239374 XP32Q5T750 250 aa5.68□□□□□ -1.5
CCDC170-201ENST00000239374 HUWE1Q7Z6Z7 4374 aaKnown RBP5.63□□□□□ -1.51
CCDC170-201ENST00000239374 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
CCDC170-201ENST00000239374 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
CCDC170-201ENST00000239374 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
CCDC170-201ENST00000239374 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
CCDC170-201ENST00000239374 M0R2T5 61 aa5.52□□□□□ -1.53
CCDC170-201ENST00000239374 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
CCDC170-201ENST00000239374 DNAH10Q8IVF4 4471 aa5.51□□□□□ -1.53
CCDC170-201ENST00000239374 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
CCDC170-201ENST00000239374 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
CCDC170-201ENST00000239374 A0A1B0GVY2 172 aa5.44□□□□□ -1.54
CCDC170-201ENST00000239374 TNP1P09430 55 aa5.4□□□□□ -1.55
CCDC170-201ENST00000239374 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
CCDC170-201ENST00000239374 PLECQ15149 4684 aaKnown RBP5.39□□□□□ -1.55
CCDC170-201ENST00000239374 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
CCDC170-201ENST00000239374 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
CCDC170-201ENST00000239374 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
CCDC170-201ENST00000239374 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
CCDC170-201ENST00000239374 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
CCDC170-201ENST00000239374 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
CCDC170-201ENST00000239374 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
CCDC170-201ENST00000239374 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
CCDC170-201ENST00000239374 ANK2Q01484 3957 aa5.22□□□□□ -1.57
CCDC170-201ENST00000239374 DNAH17Q9UFH2 4485 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms