RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 NDUFB1O75438 58 aa5.54□□□□□ -1.52
HMGCL-201ENST00000235958 ACYP1P07311 99 aa5.54□□□□□ -1.52
HMGCL-201ENST00000235958 LINC00313P59037 77 aa5.54□□□□□ -1.52
HMGCL-201ENST00000235958 XP32Q5T750 250 aa5.54□□□□□ -1.52
HMGCL-201ENST00000235958 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
HMGCL-201ENST00000235958 LRP2P98164 4655 aa5.54□□□□□ -1.52
HMGCL-201ENST00000235958 IGHV6-1A0A0B4J1U7 121 aa5.53□□□□□ -1.52
HMGCL-201ENST00000235958 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
HMGCL-201ENST00000235958 A8MWP4 228 aa5.53□□□□□ -1.52
HMGCL-201ENST00000235958 DSCR10P59022 87 aa5.53□□□□□ -1.52
HMGCL-201ENST00000235958 IGKV3D-7A0A0C4DH55 119 aa5.52□□□□□ -1.53
HMGCL-201ENST00000235958 FAM240AA0A1B0GVK7 77 aa5.52□□□□□ -1.53
HMGCL-201ENST00000235958 PRR15Q8IV56 129 aa5.51□□□□□ -1.53
HMGCL-201ENST00000235958 C8orf87E5RJ46 101 aa5.49□□□□□ -1.53
HMGCL-201ENST00000235958 J3QR89 54 aa5.48□□□□□ -1.53
HMGCL-201ENST00000235958 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
HMGCL-201ENST00000235958 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
HMGCL-201ENST00000235958 K7EQZ3 153 aa5.47□□□□□ -1.53
HMGCL-201ENST00000235958 Q8N9L7 120 aa5.47□□□□□ -1.53
HMGCL-201ENST00000235958 SEC61BP60468 96 aaKnown RBP5.46□□□□□ -1.54
HMGCL-201ENST00000235958 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
HMGCL-201ENST00000235958 CXCL6P80162 114 aa5.46□□□□□ -1.54
HMGCL-201ENST00000235958 Q75L30 129 aa5.46□□□□□ -1.54
HMGCL-201ENST00000235958 A8MUU9 505 aa5.45□□□□□ -1.54
HMGCL-201ENST00000235958 C20orf166-AS1Q96NR2 134 aa5.45□□□□□ -1.54
HMGCL-201ENST00000235958 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
HMGCL-201ENST00000235958 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
HMGCL-201ENST00000235958 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
HMGCL-201ENST00000235958 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
HMGCL-201ENST00000235958 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
HMGCL-201ENST00000235958 K7ERU9 68 aa5.41□□□□□ -1.54
HMGCL-201ENST00000235958 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
HMGCL-201ENST00000235958 WFDC13Q8IUB5 93 aa5.4□□□□□ -1.54
HMGCL-201ENST00000235958 Q8N9P0 234 aaPredicted RBP5.4□□□□□ -1.54
HMGCL-201ENST00000235958 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
HMGCL-201ENST00000235958 CASC2Q6XLA1 102 aa5.39□□□□□ -1.55
HMGCL-201ENST00000235958 TMEM254Q8TBM7 123 aa5.39□□□□□ -1.55
HMGCL-201ENST00000235958 MRPL34Q9BQ48 92 aaKnown RBP5.39□□□□□ -1.55
HMGCL-201ENST00000235958 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
HMGCL-201ENST00000235958 HCG22E2RYF7 251 aa5.37□□□□□ -1.55
HMGCL-201ENST00000235958 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
HMGCL-201ENST00000235958 HIST1H4AP62805 103 aaKnown RBP5.36□□□□□ -1.55
HMGCL-201ENST00000235958 NDUFS5O43920 106 aa5.35□□□□□ -1.55
HMGCL-201ENST00000235958 ZCCHC13Q8WW36 166 aaKnown RBP5.33□□□□□ -1.56
HMGCL-201ENST00000235958 A0A087WVE0 104 aa5.31□□□□□ -1.56
HMGCL-201ENST00000235958 MUC2Q02817 5179 aa5.31□□□□□ -1.56
HMGCL-201ENST00000235958 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
HMGCL-201ENST00000235958 Q5W150 140 aa5.3□□□□□ -1.56
HMGCL-201ENST00000235958 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
HMGCL-201ENST00000235958 IMUPQ9GZP8 106 aa5.27□□□□□ -1.57
HMGCL-201ENST00000235958 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
HMGCL-201ENST00000235958 A0A0U1RQV1 116 aa5.26□□□□□ -1.57
HMGCL-201ENST00000235958 SPINK7P58062 85 aa5.25□□□□□ -1.57
HMGCL-201ENST00000235958 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
HMGCL-201ENST00000235958 UQCRQO14949 82 aa5.2□□□□□ -1.58
HMGCL-201ENST00000235958 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
HMGCL-201ENST00000235958 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
HMGCL-201ENST00000235958 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
HMGCL-201ENST00000235958 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
HMGCL-201ENST00000235958 HRES1P13985 223 aa5.19□□□□□ -1.58
HMGCL-201ENST00000235958 OCR1Q9BZK8 76 aa5.19□□□□□ -1.58
HMGCL-201ENST00000235958 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
HMGCL-201ENST00000235958 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
HMGCL-201ENST00000235958 C7orf65Q6ZTY9 151 aa5.16□□□□□ -1.58
HMGCL-201ENST00000235958 MPLKIPQ8TAP9 179 aa5.16□□□□□ -1.58
HMGCL-201ENST00000235958 FAM236AA0A1B0GUQ0 79 aa5.15□□□□□ -1.59
HMGCL-201ENST00000235958 FAM236BA0A1B0GV22 79 aa5.15□□□□□ -1.59
HMGCL-201ENST00000235958 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
HMGCL-201ENST00000235958 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
HMGCL-201ENST00000235958 H0Y9P7 68 aa5.14□□□□□ -1.59
HMGCL-201ENST00000235958 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
HMGCL-201ENST00000235958 C5orf47Q569G3 176 aa5.13□□□□□ -1.59
HMGCL-201ENST00000235958 CYP4F30PQ9H0H9 118 aa5.13□□□□□ -1.59
HMGCL-201ENST00000235958 ATOX1O00244 68 aa5.12□□□□□ -1.59
HMGCL-201ENST00000235958 FAM236DA0A1B0GTK5 79 aa5.11□□□□□ -1.59
HMGCL-201ENST00000235958 LCE2BO14633 110 aa5.11□□□□□ -1.59
HMGCL-201ENST00000235958 FAM236CP0DP71 79 aa5.11□□□□□ -1.59
HMGCL-201ENST00000235958 MP68P56378 58 aa5.11□□□□□ -1.59
HMGCL-201ENST00000235958 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
HMGCL-201ENST00000235958 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
HMGCL-201ENST00000235958 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
HMGCL-201ENST00000235958 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
HMGCL-201ENST00000235958 SMIM20Q8N5G0 67 aa5.1□□□□□ -1.59
HMGCL-201ENST00000235958 C4orf26Q17RF5 130 aa5.09□□□□□ -1.59
HMGCL-201ENST00000235958 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
HMGCL-201ENST00000235958 MT1HP80294 61 aa5.07□□□□□ -1.6
HMGCL-201ENST00000235958 H3BPC8 53 aa5.06□□□□□ -1.6
HMGCL-201ENST00000235958 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
HMGCL-201ENST00000235958 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
HMGCL-201ENST00000235958 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
HMGCL-201ENST00000235958 SERP2Q8N6R1 65 aa5.03□□□□□ -1.6
HMGCL-201ENST00000235958 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
HMGCL-201ENST00000235958 M0R2T5 61 aa5.02□□□□□ -1.61
HMGCL-201ENST00000235958 SNURFQ9Y675 71 aa4.97□□□□□ -1.61
HMGCL-201ENST00000235958 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
HMGCL-201ENST00000235958 COX7CP15954 63 aa4.95□□□□□ -1.62
HMGCL-201ENST00000235958 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
HMGCL-201ENST00000235958 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
HMGCL-201ENST00000235958 ANAPC13Q9BS18 74 aa4.92□□□□□ -1.62
HMGCL-201ENST00000235958 A8MUN3 132 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms