RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 A0A0U1RQV1 116 aa12.73□□□□□ -0.37
GCA-201ENST00000233612 C1orf195Q5TG92 126 aa12.73□□□□□ -0.37
GCA-201ENST00000233612 IGHV6-1A0A0B4J1U7 121 aa12.73□□□□□ -0.37
GCA-201ENST00000233612 RPS29P62273 56 aaKnown RBP12.73□□□□□ -0.37
GCA-201ENST00000233612 PRR26Q8N8Z3 221 aa12.73□□□□□ -0.37
GCA-201ENST00000233612 NDUFC1O43677 76 aa12.71□□□□□ -0.37
GCA-201ENST00000233612 SPAG11AQ6PDA7 123 aa12.71□□□□□ -0.37
GCA-201ENST00000233612 TMEM258P61165 79 aa12.7□□□□□ -0.38
GCA-201ENST00000233612 SNURFQ9Y675 71 aa12.7□□□□□ -0.38
GCA-201ENST00000233612 FAM229AH3BQW9 127 aa12.69□□□□□ -0.38
GCA-201ENST00000233612 HSPG2P98160 4391 aa12.68□□□□□ -0.38
GCA-201ENST00000233612 H7BZZ5 65 aa12.68□□□□□ -0.38
GCA-201ENST00000233612 C8orf87E5RJ46 101 aa12.67□□□□□ -0.38
GCA-201ENST00000233612 LINC00304Q8N9R0 145 aa12.67□□□□□ -0.38
GCA-201ENST00000233612 RYR1P21817 5038 aa12.66□□□□□ -0.38
GCA-201ENST00000233612 NOTCH2NLQ7Z3S9 236 aa12.65□□□□□ -0.38
GCA-201ENST00000233612 MRPL34Q9BQ48 92 aaKnown RBP12.64□□□□□ -0.39
GCA-201ENST00000233612 TP53AIP1Q9HCN2 124 aa12.64□□□□□ -0.39
GCA-201ENST00000233612 ZCCHC13Q8WW36 166 aaKnown RBP12.64□□□□□ -0.39
GCA-201ENST00000233612 H3BPC8 53 aa12.6□□□□□ -0.39
GCA-201ENST00000233612 MP68P56378 58 aa12.59□□□□□ -0.39
GCA-201ENST00000233612 LINC00313P59037 77 aa12.55□□□□□ -0.4
GCA-201ENST00000233612 Q5VSD8 79 aa12.54□□□□□ -0.4
GCA-201ENST00000233612 H0Y9P7 68 aa12.53□□□□□ -0.4
GCA-201ENST00000233612 TRAV22A0A0B4J277 110 aa12.51□□□□□ -0.41
GCA-201ENST00000233612 FAM236DA0A1B0GTK5 79 aa12.49□□□□□ -0.41
GCA-201ENST00000233612 FAM236CP0DP71 79 aa12.49□□□□□ -0.41
GCA-201ENST00000233612 LINC00208Q96KT6 92 aa12.48□□□□□ -0.41
GCA-201ENST00000233612 Q8N9P0 234 aaPredicted RBP12.48□□□□□ -0.41
GCA-201ENST00000233612 NDUFS5O43920 106 aa12.47□□□□□ -0.41
GCA-201ENST00000233612 RPS28P62857 69 aaKnown RBP12.47□□□□□ -0.41
GCA-201ENST00000233612 ATP5EP56381 51 aaPredicted RBP12.46□□□□□ -0.41
GCA-201ENST00000233612 KRTAP16-1A8MUX0 517 aa12.45□□□□□ -0.42
GCA-201ENST00000233612 KRTAP10-8P60410 259 aa12.44□□□□□ -0.42
GCA-201ENST00000233612 C1orf64Q8NEQ6 169 aa12.43□□□□□ -0.42
GCA-201ENST00000233612 KIAA1109Q2LD37 5005 aa12.43□□□□□ -0.42
GCA-201ENST00000233612 TNXBP22105 4242 aa12.43□□□□□ -0.42
GCA-201ENST00000233612 EPPK1P58107 5090 aaKnown RBP12.41□□□□□ -0.42
GCA-201ENST00000233612 KRTAP17-1Q9BYP8 105 aa12.41□□□□□ -0.42
GCA-201ENST00000233612 FAT3Q8TDW7 4589 aa12.39□□□□□ -0.43
GCA-201ENST00000233612 KRTAP13-3Q3SY46 172 aa12.39□□□□□ -0.43
GCA-201ENST00000233612 Q8N1X5 172 aa12.38□□□□□ -0.43
GCA-201ENST00000233612 LRP1Q07954 4544 aaKnown RBP12.38□□□□□ -0.43
GCA-201ENST00000233612 Q5W150 140 aa12.34□□□□□ -0.43
GCA-201ENST00000233612 SERP1Q9Y6X1 66 aa12.32□□□□□ -0.44
GCA-201ENST00000233612 SPANXA2-OT1Q8N9U9 137 aa12.3□□□□□ -0.44
GCA-201ENST00000233612 FLG2Q5D862 2391 aaPredicted RBP12.3□□□□□ -0.44
GCA-201ENST00000233612 LOC101927531A0A1B0GV80 90 aa12.28□□□□□ -0.44
GCA-201ENST00000233612 CYP4F30PQ9H0H9 118 aa12.27□□□□□ -0.45
GCA-201ENST00000233612 OXTP01178 125 aa12.22□□□□□ -0.45
GCA-201ENST00000233612 IGLV7-46A0A075B6I9 117 aa12.19□□□□□ -0.46
GCA-201ENST00000233612 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
GCA-201ENST00000233612 MT1HL1P0DM35 61 aa12.16□□□□□ -0.46
GCA-201ENST00000233612 C20orf166-AS1Q96NR2 134 aa12.16□□□□□ -0.46
GCA-201ENST00000233612 A8MUU9 505 aa12.14□□□□□ -0.47
GCA-201ENST00000233612 PCOTHQ58A44 107 aa12.14□□□□□ -0.47
GCA-201ENST00000233612 FP248Q71RG6 208 aaPredicted RBP12.14□□□□□ -0.47
GCA-201ENST00000233612 IGKV2-30P06310 120 aa12.13□□□□□ -0.47
GCA-201ENST00000233612 MYCBP2O75592 4640 aa12.09□□□□□ -0.47
GCA-201ENST00000233612 C9orf92A6NGG3 77 aa12.09□□□□□ -0.47
GCA-201ENST00000233612 PRR4Q16378 134 aa12.09□□□□□ -0.47
GCA-201ENST00000233612 DMBT1Q9UGM3 2413 aaPredicted RBP12.05□□□□□ -0.48
GCA-201ENST00000233612 SMIM26A0A096LP01 95 aa12.04□□□□□ -0.48
GCA-201ENST00000233612 Q75L30 129 aa12□□□□□ -0.49
GCA-201ENST00000233612 HRES1P13985 223 aa11.97□□□□□ -0.49
GCA-201ENST00000233612 KRTAP4-5Q9BYR2 181 aa11.97□□□□□ -0.49
GCA-201ENST00000233612 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
GCA-201ENST00000233612 BIRC6Q9NR09 4857 aa11.92□□□□□ -0.5
GCA-201ENST00000233612 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
GCA-201ENST00000233612 COA5Q86WW8 74 aa11.87□□□□□ -0.51
GCA-201ENST00000233612 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
GCA-201ENST00000233612 HERC2O95714 4834 aa11.86□□□□□ -0.51
GCA-201ENST00000233612 ACYP2P14621 99 aa11.83□□□□□ -0.52
GCA-201ENST00000233612 RPL37P61927 97 aaKnown RBP11.81□□□□□ -0.52
GCA-201ENST00000233612 XP32Q5T750 250 aa11.81□□□□□ -0.52
GCA-201ENST00000233612 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
GCA-201ENST00000233612 Q1T7F1 81 aa11.77□□□□□ -0.53
GCA-201ENST00000233612 ATP11AUNQ6ZP68 121 aa11.76□□□□□ -0.53
GCA-201ENST00000233612 SPINK7P58062 85 aa11.75□□□□□ -0.53
GCA-201ENST00000233612 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
GCA-201ENST00000233612 C4orf26Q17RF5 130 aa11.72□□□□□ -0.53
GCA-201ENST00000233612 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
GCA-201ENST00000233612 A8MUN3 132 aa11.69□□□□□ -0.54
GCA-201ENST00000233612 V9GYY9 64 aa11.69□□□□□ -0.54
GCA-201ENST00000233612 J3QL48 77 aa11.59□□□□□ -0.55
GCA-201ENST00000233612 CHKB-CPT1BH3BT56 60 aa11.57□□□□□ -0.56
GCA-201ENST00000233612 KRTAP3-1Q9BYR8 98 aa11.55□□□□□ -0.56
GCA-201ENST00000233612 LINC01558Q9Y6Z2 57 aa11.54□□□□□ -0.56
GCA-201ENST00000233612 LRP2P98164 4655 aa11.52□□□□□ -0.57
GCA-201ENST00000233612 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
GCA-201ENST00000233612 LPAP08519 4548 aa11.47□□□□□ -0.57
GCA-201ENST00000233612 PSPHP1O15172 72 aa11.43□□□□□ -0.58
GCA-201ENST00000233612 Q5VV11 94 aa11.4□□□□□ -0.58
GCA-201ENST00000233612 PRR15LQ9BU68 103 aa11.39□□□□□ -0.59
GCA-201ENST00000233612 SPTSSBQ8NFR3 76 aa11.34□□□□□ -0.59
GCA-201ENST00000233612 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
GCA-201ENST00000233612 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
GCA-201ENST00000233612 MUC17Q685J3 4493 aa11.24□□□□□ -0.61
GCA-201ENST00000233612 A0A1B0GU69 56 aa11.21□□□□□ -0.61
GCA-201ENST00000233612 H1FX-AS1Q4G0G2 97 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms