RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PANO1I0J062 215 aa5.77□□□□□ -1.49
HLA-DOA-201ENST00000229829 UBE2DNLQ8IWF7 75 aa5.77□□□□□ -1.49
HLA-DOA-201ENST00000229829 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
HLA-DOA-201ENST00000229829 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
HLA-DOA-201ENST00000229829 CDK2AP2O75956 126 aa5.76□□□□□ -1.49
HLA-DOA-201ENST00000229829 LINC01554Q52M75 96 aa5.76□□□□□ -1.49
HLA-DOA-201ENST00000229829 A8MWP4 228 aa5.76□□□□□ -1.49
HLA-DOA-201ENST00000229829 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 KRTAP29-1A8MX34 341 aaPredicted RBP5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 H3BPC8 53 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 C9orf163Q8N9P6 203 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 FBN3Q75N90 2809 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 RETNLBQ9BQ08 111 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 APLNQ9ULZ1 77 aa5.75□□□□□ -1.49
HLA-DOA-201ENST00000229829 HRES1P13985 223 aa5.74□□□□□ -1.49
HLA-DOA-201ENST00000229829 SPINK6Q6UWN8 80 aa5.74□□□□□ -1.49
HLA-DOA-201ENST00000229829 STARD9Q9P2P6 4700 aa5.74□□□□□ -1.49
HLA-DOA-201ENST00000229829 LINC00472Q9H8W2 130 aa5.73□□□□□ -1.49
HLA-DOA-201ENST00000229829 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
HLA-DOA-201ENST00000229829 SACSQ9NZJ4 4579 aa5.73□□□□□ -1.49
HLA-DOA-201ENST00000229829 PKD1P98161 4303 aa5.72□□□□□ -1.49
HLA-DOA-201ENST00000229829 SPRR1BP22528 89 aa5.72□□□□□ -1.49
HLA-DOA-201ENST00000229829 FAT3Q8TDW7 4589 aa5.7□□□□□ -1.5
HLA-DOA-201ENST00000229829 MMP24-AS1A0A0U1RRL7 71 aa5.69□□□□□ -1.5
HLA-DOA-201ENST00000229829 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
HLA-DOA-201ENST00000229829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
HLA-DOA-201ENST00000229829 A0A1B0GU69 56 aa5.68□□□□□ -1.5
HLA-DOA-201ENST00000229829 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
HLA-DOA-201ENST00000229829 KRTAP13-1Q8IUC0 172 aa5.68□□□□□ -1.5
HLA-DOA-201ENST00000229829 NBDYA0A0U1RRE5 68 aa5.67□□□□□ -1.5
HLA-DOA-201ENST00000229829 Q6ZRN7 208 aaPredicted RBP5.67□□□□□ -1.5
HLA-DOA-201ENST00000229829 TGP01266 2768 aa5.65□□□□□ -1.5
HLA-DOA-201ENST00000229829 Q96NJ1 140 aa5.65□□□□□ -1.5
HLA-DOA-201ENST00000229829 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
HLA-DOA-201ENST00000229829 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.5
HLA-DOA-201ENST00000229829 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
HLA-DOA-201ENST00000229829 SPINK1P00995 79 aa5.62□□□□□ -1.51
HLA-DOA-201ENST00000229829 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
HLA-DOA-201ENST00000229829 TP53AIP1Q9HCN2 124 aa5.62□□□□□ -1.51
HLA-DOA-201ENST00000229829 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
HLA-DOA-201ENST00000229829 DNAH11Q96DT5 4516 aa5.62□□□□□ -1.51
HLA-DOA-201ENST00000229829 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
HLA-DOA-201ENST00000229829 A0A087X002 238 aa5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 SEC61BP60468 96 aaKnown RBP5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 MEGF8Q7Z7M0 2845 aa5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 ACYP2P14621 99 aa5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 MRPL34Q9BQ48 92 aaKnown RBP5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
HLA-DOA-201ENST00000229829 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
HLA-DOA-201ENST00000229829 A0A087WTM6 91 aa5.58□□□□□ -1.52
HLA-DOA-201ENST00000229829 ASB16-AS1Q495Z4 193 aa5.58□□□□□ -1.52
HLA-DOA-201ENST00000229829 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
HLA-DOA-201ENST00000229829 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
HLA-DOA-201ENST00000229829 Q6ZR54 194 aa5.57□□□□□ -1.52
HLA-DOA-201ENST00000229829 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
HLA-DOA-201ENST00000229829 UQCR11O14957 56 aa5.56□□□□□ -1.52
HLA-DOA-201ENST00000229829 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
HLA-DOA-201ENST00000229829 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
HLA-DOA-201ENST00000229829 IGLV5-52A0A0A0MRZ9 124 aa5.55□□□□□ -1.52
HLA-DOA-201ENST00000229829 RTL8CO15255 209 aa5.55□□□□□ -1.52
HLA-DOA-201ENST00000229829 CRIPTQ9P021 101 aa5.55□□□□□ -1.52
HLA-DOA-201ENST00000229829 Q5W150 140 aa5.55□□□□□ -1.52
HLA-DOA-201ENST00000229829 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
HLA-DOA-201ENST00000229829 RYR3Q15413 4870 aa5.53□□□□□ -1.52
HLA-DOA-201ENST00000229829 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
HLA-DOA-201ENST00000229829 ZNF861PO60384 105 aa5.53□□□□□ -1.52
HLA-DOA-201ENST00000229829 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
HLA-DOA-201ENST00000229829 CIRBP-AS1Q8TBR5 109 aa5.51□□□□□ -1.53
HLA-DOA-201ENST00000229829 LRP1BQ9NZR2 4599 aa5.5□□□□□ -1.53
HLA-DOA-201ENST00000229829 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
HLA-DOA-201ENST00000229829 HERC2O95714 4834 aa5.48□□□□□ -1.53
HLA-DOA-201ENST00000229829 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
HLA-DOA-201ENST00000229829 IGLV7-43P04211 117 aa5.46□□□□□ -1.54
HLA-DOA-201ENST00000229829 HYDINQ4G0P3 5121 aa5.45□□□□□ -1.54
HLA-DOA-201ENST00000229829 TNXBP22105 4242 aa5.45□□□□□ -1.54
HLA-DOA-201ENST00000229829 FAT1Q14517 4588 aa5.44□□□□□ -1.54
HLA-DOA-201ENST00000229829 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
HLA-DOA-201ENST00000229829 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
HLA-DOA-201ENST00000229829 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
HLA-DOA-201ENST00000229829 SSBP3-AS1Q7Z2R9 100 aa5.41□□□□□ -1.54
HLA-DOA-201ENST00000229829 Q8N1X5 172 aa5.41□□□□□ -1.54
HLA-DOA-201ENST00000229829 LY6G6CO95867 125 aa5.4□□□□□ -1.54
HLA-DOA-201ENST00000229829 DMAC1Q96GE9 116 aa5.4□□□□□ -1.54
HLA-DOA-201ENST00000229829 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
HLA-DOA-201ENST00000229829 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
HLA-DOA-201ENST00000229829 ROMO1P60602 79 aa5.36□□□□□ -1.55
HLA-DOA-201ENST00000229829 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
HLA-DOA-201ENST00000229829 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
HLA-DOA-201ENST00000229829 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
HLA-DOA-201ENST00000229829 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
HLA-DOA-201ENST00000229829 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
HLA-DOA-201ENST00000229829 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
HLA-DOA-201ENST00000229829 HSPG2P98160 4391 aa5.3□□□□□ -1.56
HLA-DOA-201ENST00000229829 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
HLA-DOA-201ENST00000229829 A8MUU9 505 aa5.28□□□□□ -1.56
HLA-DOA-201ENST00000229829 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
HLA-DOA-201ENST00000229829 K7ERS5 55 aa5.27□□□□□ -1.57
HLA-DOA-201ENST00000229829 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms