RNA–Protein interactions for RNA: ENST00000229304.4

APOBEC1-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-201ENST00000229304 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
APOBEC1-201ENST00000229304 SMIM20Q8N5G0 67 aa5.62□□□□□ -1.51
APOBEC1-201ENST00000229304 Q8N9L7 120 aa5.61□□□□□ -1.51
APOBEC1-201ENST00000229304 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
APOBEC1-201ENST00000229304 A0A087X002 238 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 A8MWP4 228 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 K7EQZ3 153 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 UQCRQO14949 82 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 COX7CP15954 63 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 Q5XG85 94 aa5.59□□□□□ -1.51
APOBEC1-201ENST00000229304 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
APOBEC1-201ENST00000229304 Q96NJ1 140 aa5.58□□□□□ -1.52
APOBEC1-201ENST00000229304 TRAV7A0A075B6U4 112 aa5.57□□□□□ -1.52
APOBEC1-201ENST00000229304 SMR3BP02814 79 aaPredicted RBP5.57□□□□□ -1.52
APOBEC1-201ENST00000229304 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
APOBEC1-201ENST00000229304 FAT1Q14517 4588 aa5.57□□□□□ -1.52
APOBEC1-201ENST00000229304 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
APOBEC1-201ENST00000229304 CCDC179H3BU77 68 aa5.56□□□□□ -1.52
APOBEC1-201ENST00000229304 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
APOBEC1-201ENST00000229304 NDUFB1O75438 58 aa5.55□□□□□ -1.52
APOBEC1-201ENST00000229304 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
APOBEC1-201ENST00000229304 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
APOBEC1-201ENST00000229304 TYMSOSQ8TAI1 123 aa5.53□□□□□ -1.52
APOBEC1-201ENST00000229304 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
APOBEC1-201ENST00000229304 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
APOBEC1-201ENST00000229304 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
APOBEC1-201ENST00000229304 SPINK1P00995 79 aa5.51□□□□□ -1.53
APOBEC1-201ENST00000229304 LIMD2Q9BT23 127 aa5.51□□□□□ -1.53
APOBEC1-201ENST00000229304 RYR1P21817 5038 aa5.51□□□□□ -1.53
APOBEC1-201ENST00000229304 A0A1B0GVX0 72 aa5.5□□□□□ -1.53
APOBEC1-201ENST00000229304 SPAG11AQ6PDA7 123 aa5.5□□□□□ -1.53
APOBEC1-201ENST00000229304 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
APOBEC1-201ENST00000229304 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
APOBEC1-201ENST00000229304 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
APOBEC1-201ENST00000229304 PRR26Q8N8Z3 221 aa5.48□□□□□ -1.53
APOBEC1-201ENST00000229304 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
APOBEC1-201ENST00000229304 HERC2O95714 4834 aa5.48□□□□□ -1.53
APOBEC1-201ENST00000229304 HSPG2P98160 4391 aa5.47□□□□□ -1.53
APOBEC1-201ENST00000229304 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
APOBEC1-201ENST00000229304 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
APOBEC1-201ENST00000229304 LINC00304Q8N9R0 145 aa5.47□□□□□ -1.53
APOBEC1-201ENST00000229304 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
APOBEC1-201ENST00000229304 C8orf87E5RJ46 101 aa5.46□□□□□ -1.54
APOBEC1-201ENST00000229304 KLKP1Q107X0 134 aa5.46□□□□□ -1.54
APOBEC1-201ENST00000229304 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
APOBEC1-201ENST00000229304 PKHD1L1Q86WI1 4243 aa5.46□□□□□ -1.54
APOBEC1-201ENST00000229304 IGHV6-1A0A0B4J1U7 121 aa5.45□□□□□ -1.54
APOBEC1-201ENST00000229304 C20orf197Q8N268 126 aa5.45□□□□□ -1.54
APOBEC1-201ENST00000229304 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
APOBEC1-201ENST00000229304 TMEM254Q8TBM7 123 aa5.44□□□□□ -1.54
APOBEC1-201ENST00000229304 Q5VSD8 79 aa5.43□□□□□ -1.54
APOBEC1-201ENST00000229304 A0A0U1RQV1 116 aa5.42□□□□□ -1.54
APOBEC1-201ENST00000229304 NDUFC1O43677 76 aa5.42□□□□□ -1.54
APOBEC1-201ENST00000229304 MRPL34Q9BQ48 92 aaKnown RBP5.42□□□□□ -1.54
APOBEC1-201ENST00000229304 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
APOBEC1-201ENST00000229304 H3BPC8 53 aa5.4□□□□□ -1.54
APOBEC1-201ENST00000229304 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
APOBEC1-201ENST00000229304 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
APOBEC1-201ENST00000229304 LINC00313P59037 77 aa5.39□□□□□ -1.55
APOBEC1-201ENST00000229304 TMEM258P61165 79 aa5.39□□□□□ -1.55
APOBEC1-201ENST00000229304 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
APOBEC1-201ENST00000229304 H7BZZ5 65 aa5.38□□□□□ -1.55
APOBEC1-201ENST00000229304 MP68P56378 58 aa5.38□□□□□ -1.55
APOBEC1-201ENST00000229304 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
APOBEC1-201ENST00000229304 ZCCHC13Q8WW36 166 aaKnown RBP5.38□□□□□ -1.55
APOBEC1-201ENST00000229304 KIAA1109Q2LD37 5005 aa5.38□□□□□ -1.55
APOBEC1-201ENST00000229304 H0Y9P7 68 aa5.35□□□□□ -1.55
APOBEC1-201ENST00000229304 Q8N9P0 234 aaPredicted RBP5.35□□□□□ -1.55
APOBEC1-201ENST00000229304 TRAV22A0A0B4J277 110 aa5.34□□□□□ -1.55
APOBEC1-201ENST00000229304 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
APOBEC1-201ENST00000229304 TNXBP22105 4242 aa5.33□□□□□ -1.56
APOBEC1-201ENST00000229304 NDUFS5O43920 106 aa5.33□□□□□ -1.56
APOBEC1-201ENST00000229304 FAT3Q8TDW7 4589 aa5.32□□□□□ -1.56
APOBEC1-201ENST00000229304 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
APOBEC1-201ENST00000229304 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
APOBEC1-201ENST00000229304 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
APOBEC1-201ENST00000229304 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
APOBEC1-201ENST00000229304 LRP1Q07954 4544 aaKnown RBP5.3□□□□□ -1.56
APOBEC1-201ENST00000229304 KRTAP13-3Q3SY46 172 aa5.3□□□□□ -1.56
APOBEC1-201ENST00000229304 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
APOBEC1-201ENST00000229304 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
APOBEC1-201ENST00000229304 Q5W150 140 aa5.28□□□□□ -1.56
APOBEC1-201ENST00000229304 FLG2Q5D862 2391 aaPredicted RBP5.27□□□□□ -1.57
APOBEC1-201ENST00000229304 LOC101927531A0A1B0GV80 90 aa5.27□□□□□ -1.57
APOBEC1-201ENST00000229304 OXTP01178 125 aa5.27□□□□□ -1.57
APOBEC1-201ENST00000229304 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
APOBEC1-201ENST00000229304 FP248Q71RG6 208 aaPredicted RBP5.27□□□□□ -1.57
APOBEC1-201ENST00000229304 SPANXA2-OT1Q8N9U9 137 aa5.27□□□□□ -1.57
APOBEC1-201ENST00000229304 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
APOBEC1-201ENST00000229304 A8MUU9 505 aa5.23□□□□□ -1.57
APOBEC1-201ENST00000229304 CYP4F30PQ9H0H9 118 aa5.23□□□□□ -1.57
APOBEC1-201ENST00000229304 SERP1Q9Y6X1 66 aa5.23□□□□□ -1.57
APOBEC1-201ENST00000229304 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
APOBEC1-201ENST00000229304 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
APOBEC1-201ENST00000229304 IGKV2-30P06310 120 aa5.21□□□□□ -1.58
APOBEC1-201ENST00000229304 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
APOBEC1-201ENST00000229304 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms