RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
GAPDH-201ENST00000229239 DNAH8Q96JB1 4490 aa10□□□□□ -0.81
GAPDH-201ENST00000229239 hDV103S1A0JD37 113 aa10□□□□□ -0.81
GAPDH-201ENST00000229239 ABCA13Q86UQ4 5058 aa10□□□□□ -0.81
GAPDH-201ENST00000229239 TP53AIP1Q9HCN2 124 aa9.99□□□□□ -0.81
GAPDH-201ENST00000229239 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
GAPDH-201ENST00000229239 FAM229BQ4G0N7 80 aa9.98□□□□□ -0.81
GAPDH-201ENST00000229239 A0A1B0GVX0 72 aa9.97□□□□□ -0.81
GAPDH-201ENST00000229239 OXTP01178 125 aa9.97□□□□□ -0.81
GAPDH-201ENST00000229239 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
GAPDH-201ENST00000229239 KRTAP4-5Q9BYR2 181 aa9.94□□□□□ -0.82
GAPDH-201ENST00000229239 SMIM26A0A096LP01 95 aa9.93□□□□□ -0.82
GAPDH-201ENST00000229239 H0Y9P7 68 aa9.93□□□□□ -0.82
GAPDH-201ENST00000229239 TRAV22A0A0B4J277 110 aa9.91□□□□□ -0.82
GAPDH-201ENST00000229239 LINC00208Q96KT6 92 aa9.9□□□□□ -0.82
GAPDH-201ENST00000229239 Q5XG85 94 aa9.89□□□□□ -0.83
GAPDH-201ENST00000229239 Q8N1X5 172 aa9.89□□□□□ -0.83
GAPDH-201ENST00000229239 IGHV6-1A0A0B4J1U7 121 aa9.89□□□□□ -0.83
GAPDH-201ENST00000229239 CYP4F30PQ9H0H9 118 aa9.88□□□□□ -0.83
GAPDH-201ENST00000229239 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
GAPDH-201ENST00000229239 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
GAPDH-201ENST00000229239 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
GAPDH-201ENST00000229239 C1orf64Q8NEQ6 169 aa9.85□□□□□ -0.83
GAPDH-201ENST00000229239 A0A087X002 238 aa9.82□□□□□ -0.84
GAPDH-201ENST00000229239 KRTAP13-2Q52LG2 175 aa9.82□□□□□ -0.84
GAPDH-201ENST00000229239 FAT1Q14517 4588 aa9.81□□□□□ -0.84
GAPDH-201ENST00000229239 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
GAPDH-201ENST00000229239 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
GAPDH-201ENST00000229239 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
GAPDH-201ENST00000229239 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
GAPDH-201ENST00000229239 NDUFS5O43920 106 aa9.78□□□□□ -0.84
GAPDH-201ENST00000229239 SPINK6Q6UWN8 80 aa9.78□□□□□ -0.84
GAPDH-201ENST00000229239 Q5VSD8 79 aa9.76□□□□□ -0.85
GAPDH-201ENST00000229239 FP248Q71RG6 208 aaPredicted RBP9.74□□□□□ -0.85
GAPDH-201ENST00000229239 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
GAPDH-201ENST00000229239 C4orf48Q5BLP8 95 aa9.73□□□□□ -0.85
GAPDH-201ENST00000229239 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
GAPDH-201ENST00000229239 PLA2G1BP04054 148 aaKnown RBP9.72□□□□□ -0.85
GAPDH-201ENST00000229239 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
GAPDH-201ENST00000229239 C1orf195Q5TG92 126 aa9.71□□□□□ -0.85
GAPDH-201ENST00000229239 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
GAPDH-201ENST00000229239 SPINK1P00995 79 aa9.7□□□□□ -0.86
GAPDH-201ENST00000229239 LINC00313P59037 77 aa9.7□□□□□ -0.86
GAPDH-201ENST00000229239 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
GAPDH-201ENST00000229239 TYMSOSQ8TAI1 123 aa9.68□□□□□ -0.86
GAPDH-201ENST00000229239 RPS29P62273 56 aaKnown RBP9.68□□□□□ -0.86
GAPDH-201ENST00000229239 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
GAPDH-201ENST00000229239 PRR4Q16378 134 aa9.65□□□□□ -0.86
GAPDH-201ENST00000229239 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
GAPDH-201ENST00000229239 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
GAPDH-201ENST00000229239 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
GAPDH-201ENST00000229239 Q1T7F1 81 aa9.62□□□□□ -0.87
GAPDH-201ENST00000229239 V9GYY9 64 aa9.62□□□□□ -0.87
GAPDH-201ENST00000229239 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
GAPDH-201ENST00000229239 HERC1Q15751 4861 aa9.6□□□□□ -0.87
GAPDH-201ENST00000229239 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
GAPDH-201ENST00000229239 DMBT1Q9UGM3 2413 aaPredicted RBP9.59□□□□□ -0.87
GAPDH-201ENST00000229239 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
GAPDH-201ENST00000229239 LINC00304Q8N9R0 145 aa9.57□□□□□ -0.88
GAPDH-201ENST00000229239 Q5W150 140 aa9.56□□□□□ -0.88
GAPDH-201ENST00000229239 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
GAPDH-201ENST00000229239 KRTAP10-4P60372 401 aaPredicted RBP9.55□□□□□ -0.88
GAPDH-201ENST00000229239 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
GAPDH-201ENST00000229239 COA5Q86WW8 74 aa9.51□□□□□ -0.89
GAPDH-201ENST00000229239 PKHD1L1Q86WI1 4243 aa9.51□□□□□ -0.89
GAPDH-201ENST00000229239 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
GAPDH-201ENST00000229239 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
GAPDH-201ENST00000229239 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
GAPDH-201ENST00000229239 J3QL48 77 aa9.44□□□□□ -0.9
GAPDH-201ENST00000229239 PRO0628Q9UI54 55 aa9.42□□□□□ -0.9
GAPDH-201ENST00000229239 ACYP2P14621 99 aa9.41□□□□□ -0.9
GAPDH-201ENST00000229239 HRES1P13985 223 aa9.4□□□□□ -0.91
GAPDH-201ENST00000229239 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
GAPDH-201ENST00000229239 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
GAPDH-201ENST00000229239 PSPHP1O15172 72 aa9.34□□□□□ -0.91
GAPDH-201ENST00000229239 BRK1Q8WUW1 75 aa9.32□□□□□ -0.92
GAPDH-201ENST00000229239 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
GAPDH-201ENST00000229239 A8MUN3 132 aa9.31□□□□□ -0.92
GAPDH-201ENST00000229239 IGKV2D-30A0A075B6S6 120 aa9.28□□□□□ -0.92
GAPDH-201ENST00000229239 Q5VV11 94 aa9.28□□□□□ -0.92
GAPDH-201ENST00000229239 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
GAPDH-201ENST00000229239 C20orf166-AS1Q96NR2 134 aa9.28□□□□□ -0.92
GAPDH-201ENST00000229239 PRR15LQ9BU68 103 aa9.27□□□□□ -0.93
GAPDH-201ENST00000229239 A8MUU9 505 aa9.26□□□□□ -0.93
GAPDH-201ENST00000229239 CHKB-CPT1BH3BT56 60 aa9.25□□□□□ -0.93
GAPDH-201ENST00000229239 Q75L30 129 aa9.25□□□□□ -0.93
GAPDH-201ENST00000229239 MT1HL1P0DM35 61 aa9.23□□□□□ -0.93
GAPDH-201ENST00000229239 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
GAPDH-201ENST00000229239 TNXBP22105 4242 aa9.2□□□□□ -0.94
GAPDH-201ENST00000229239 KRTAP10-8P60410 259 aa9.19□□□□□ -0.94
GAPDH-201ENST00000229239 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
GAPDH-201ENST00000229239 A6NED7 52 aa9.1□□□□□ -0.95
GAPDH-201ENST00000229239 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
GAPDH-201ENST00000229239 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
GAPDH-201ENST00000229239 A0A1B0GU69 56 aa9.02□□□□□ -0.96
GAPDH-201ENST00000229239 UBR4Q5T4S7 5183 aa9.01□□□□□ -0.97
GAPDH-201ENST00000229239 SPINK7P58062 85 aa9.01□□□□□ -0.97
GAPDH-201ENST00000229239 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
GAPDH-201ENST00000229239 LCA10Q71F78 164 aa8.98□□□□□ -0.97
GAPDH-201ENST00000229239 LRP2P98164 4655 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms