RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
AFP-201ENST00000226359 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
AFP-201ENST00000226359 IGKV3D-7A0A0C4DH55 119 aa3.42□□□□□ -1.86
AFP-201ENST00000226359 TRBV7-6A0A0J9YX20 115 aa3.42□□□□□ -1.86
AFP-201ENST00000226359 H3BQ85 93 aa3.41□□□□□ -1.86
AFP-201ENST00000226359 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
AFP-201ENST00000226359 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
AFP-201ENST00000226359 KRTAP10-8P60410 259 aa3.4□□□□□ -1.86
AFP-201ENST00000226359 HRCT1Q6UXD1 115 aa3.4□□□□□ -1.86
AFP-201ENST00000226359 DSCR8Q96T75 97 aa3.4□□□□□ -1.86
AFP-201ENST00000226359 CYSTM1Q9H1C7 97 aa3.4□□□□□ -1.86
AFP-201ENST00000226359 PRO0628Q9UI54 55 aa3.4□□□□□ -1.86
AFP-201ENST00000226359 ELOF1P60002 83 aaKnown RBP3.4□□□□□ -1.87
AFP-201ENST00000226359 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
AFP-201ENST00000226359 ZNF706Q9Y5V0 76 aaPredicted RBP3.4□□□□□ -1.87
AFP-201ENST00000226359 ETDCA0A1B0GVM5 59 aa3.39□□□□□ -1.87
AFP-201ENST00000226359 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
AFP-201ENST00000226359 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
AFP-201ENST00000226359 Q5XG85 94 aa3.39□□□□□ -1.87
AFP-201ENST00000226359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.39□□□□□ -1.87
AFP-201ENST00000226359 KCNQ1DNQ9H478 68 aa3.39□□□□□ -1.87
AFP-201ENST00000226359 C14orf132Q9NPU4 83 aa3.39□□□□□ -1.87
AFP-201ENST00000226359 A0A087WVE0 104 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 FAM229BQ4G0N7 80 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 C1orf195Q5TG92 126 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 Q6ZQY7 126 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 TYMSOSQ8TAI1 123 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 OBSCN-AS1Q96MR7 158 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 LINC00846Q9NV44 126 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 LAMTOR3Q9UHA4 124 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 TNXBP22105 4242 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 SMIM26A0A096LP01 95 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
AFP-201ENST00000226359 HMCN2Q8NDA2 5059 aa3.38□□□□□ -1.87
AFP-201ENST00000226359 PRLHP81277 87 aa3.37□□□□□ -1.87
AFP-201ENST00000226359 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
AFP-201ENST00000226359 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 CCKP06307 115 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 RBM3P98179 157 aaKnown RBP3.36□□□□□ -1.87
AFP-201ENST00000226359 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
AFP-201ENST00000226359 KRTAP13-1Q8IUC0 172 aa3.35□□□□□ -1.87
AFP-201ENST00000226359 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
AFP-201ENST00000226359 SPRR1AP35321 89 aa3.34□□□□□ -1.87
AFP-201ENST00000226359 Q6ZRX8 168 aa3.34□□□□□ -1.87
AFP-201ENST00000226359 DEFB105AQ8NG35 78 aa3.34□□□□□ -1.87
AFP-201ENST00000226359 PDE6GP18545 87 aa3.34□□□□□ -1.88
AFP-201ENST00000226359 C20orf197Q8N268 126 aa3.34□□□□□ -1.88
AFP-201ENST00000226359 TRAV7A0A075B6U4 112 aa3.33□□□□□ -1.88
AFP-201ENST00000226359 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
AFP-201ENST00000226359 SPRR4Q96PI1 79 aa3.33□□□□□ -1.88
AFP-201ENST00000226359 LOC110117498A0A087WWA1 95 aa3.32□□□□□ -1.88
AFP-201ENST00000226359 UBL5Q9BZL1 73 aa3.32□□□□□ -1.88
AFP-201ENST00000226359 Q6ZQT0 140 aa3.32□□□□□ -1.88
AFP-201ENST00000226359 Q9BRP9 147 aa3.32□□□□□ -1.88
AFP-201ENST00000226359 ANAPC11Q9NYG5 84 aa3.32□□□□□ -1.88
AFP-201ENST00000226359 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
AFP-201ENST00000226359 F8WEM9 126 aa3.31□□□□□ -1.88
AFP-201ENST00000226359 H7BZZ5 65 aa3.31□□□□□ -1.88
AFP-201ENST00000226359 KRTAP13-2Q52LG2 175 aa3.31□□□□□ -1.88
AFP-201ENST00000226359 ST20-AS1Q8NBB2 130 aa3.31□□□□□ -1.88
AFP-201ENST00000226359 TRBV7-4A0A0J9YYF1 115 aa3.3□□□□□ -1.88
AFP-201ENST00000226359 ERC2-IT1O76042 136 aa3.3□□□□□ -1.88
AFP-201ENST00000226359 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
AFP-201ENST00000226359 IGLV5-48A0A075B6I7 105 aa3.29□□□□□ -1.88
AFP-201ENST00000226359 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
AFP-201ENST00000226359 NDUFC1O43677 76 aa3.29□□□□□ -1.88
AFP-201ENST00000226359 NDUFS5O43920 106 aa3.29□□□□□ -1.88
AFP-201ENST00000226359 MOBPQ13875 183 aa3.29□□□□□ -1.88
AFP-201ENST00000226359 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
AFP-201ENST00000226359 A0A0U1RQV1 116 aa3.28□□□□□ -1.88
AFP-201ENST00000226359 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
AFP-201ENST00000226359 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
AFP-201ENST00000226359 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
AFP-201ENST00000226359 SPINK1P00995 79 aa3.27□□□□□ -1.89
AFP-201ENST00000226359 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
AFP-201ENST00000226359 A0A1B0GW54 56 aa3.26□□□□□ -1.89
AFP-201ENST00000226359 NREPQ16612 68 aa3.26□□□□□ -1.89
AFP-201ENST00000226359 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
AFP-201ENST00000226359 RETNLBQ9BQ08 111 aa3.26□□□□□ -1.89
AFP-201ENST00000226359 LRP2P98164 4655 aa3.26□□□□□ -1.89
AFP-201ENST00000226359 SPRR1BP22528 89 aa3.25□□□□□ -1.89
AFP-201ENST00000226359 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
AFP-201ENST00000226359 LIMD2Q9BT23 127 aa3.25□□□□□ -1.89
AFP-201ENST00000226359 PSPHP1O15172 72 aa3.25□□□□□ -1.89
AFP-201ENST00000226359 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
AFP-201ENST00000226359 A0A1W2PNM2 257 aa3.24□□□□□ -1.89
AFP-201ENST00000226359 C8orf87E5RJ46 101 aa3.24□□□□□ -1.89
AFP-201ENST00000226359 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
AFP-201ENST00000226359 UBR4Q5T4S7 5183 aa3.24□□□□□ -1.89
AFP-201ENST00000226359 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
AFP-201ENST00000226359 IGHV6-1A0A0B4J1U7 121 aa3.23□□□□□ -1.89
AFP-201ENST00000226359 TMEM254Q8TBM7 123 aa3.23□□□□□ -1.89
AFP-201ENST00000226359 BPY2O14599 106 aa3.22□□□□□ -1.89
AFP-201ENST00000226359 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
AFP-201ENST00000226359 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
AFP-201ENST00000226359 A0A0G2JQZ4 141 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms