RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 H7BZZ5 65 aa10.09□□□□□ -0.79
VRK1-201ENST00000216639 RYR3Q15413 4870 aa10.08□□□□□ -0.8
VRK1-201ENST00000216639 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
VRK1-201ENST00000216639 MP68P56378 58 aa10.07□□□□□ -0.8
VRK1-201ENST00000216639 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
VRK1-201ENST00000216639 SPINK1P00995 79 aa10.05□□□□□ -0.8
VRK1-201ENST00000216639 TP53AIP1Q9HCN2 124 aa10.04□□□□□ -0.8
VRK1-201ENST00000216639 KRTAP10-4P60372 401 aaPredicted RBP10.03□□□□□ -0.8
VRK1-201ENST00000216639 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.8
VRK1-201ENST00000216639 C8orf87E5RJ46 101 aa10.02□□□□□ -0.8
VRK1-201ENST00000216639 FAM236CP0DP71 79 aa10.02□□□□□ -0.8
VRK1-201ENST00000216639 C1orf195Q5TG92 126 aa10.02□□□□□ -0.8
VRK1-201ENST00000216639 PRR26Q8N8Z3 221 aa10.02□□□□□ -0.8
VRK1-201ENST00000216639 MRPL34Q9BQ48 92 aaKnown RBP10.02□□□□□ -0.8
VRK1-201ENST00000216639 SPAG11AQ6PDA7 123 aa10.01□□□□□ -0.81
VRK1-201ENST00000216639 H3BPC8 53 aa10□□□□□ -0.81
VRK1-201ENST00000216639 LINC00304Q8N9R0 145 aa10□□□□□ -0.81
VRK1-201ENST00000216639 H0Y9P7 68 aa9.99□□□□□ -0.81
VRK1-201ENST00000216639 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
VRK1-201ENST00000216639 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
VRK1-201ENST00000216639 ZCCHC13Q8WW36 166 aaKnown RBP9.99□□□□□ -0.81
VRK1-201ENST00000216639 NDUFS5O43920 106 aa9.98□□□□□ -0.81
VRK1-201ENST00000216639 ATP5EP56381 51 aaPredicted RBP9.98□□□□□ -0.81
VRK1-201ENST00000216639 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
VRK1-201ENST00000216639 TRAV22A0A0B4J277 110 aa9.96□□□□□ -0.81
VRK1-201ENST00000216639 LINC00208Q96KT6 92 aa9.96□□□□□ -0.82
VRK1-201ENST00000216639 APOBP04114 4563 aaKnown RBP9.95□□□□□ -0.82
VRK1-201ENST00000216639 LINC00313P59037 77 aa9.94□□□□□ -0.82
VRK1-201ENST00000216639 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
VRK1-201ENST00000216639 C1orf64Q8NEQ6 169 aa9.9□□□□□ -0.83
VRK1-201ENST00000216639 Q5VSD8 79 aa9.86□□□□□ -0.83
VRK1-201ENST00000216639 SERP1Q9Y6X1 66 aa9.85□□□□□ -0.83
VRK1-201ENST00000216639 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
VRK1-201ENST00000216639 FAT1Q14517 4588 aa9.79□□□□□ -0.84
VRK1-201ENST00000216639 KRTAP16-1A8MUX0 517 aa9.78□□□□□ -0.84
VRK1-201ENST00000216639 SPANXA2-OT1Q8N9U9 137 aa9.76□□□□□ -0.85
VRK1-201ENST00000216639 LOC101927531A0A1B0GV80 90 aa9.76□□□□□ -0.85
VRK1-201ENST00000216639 Q5W150 140 aa9.73□□□□□ -0.85
VRK1-201ENST00000216639 CYP4F30PQ9H0H9 118 aa9.73□□□□□ -0.85
VRK1-201ENST00000216639 EPPK1P58107 5090 aaKnown RBP9.73□□□□□ -0.85
VRK1-201ENST00000216639 OXTP01178 125 aa9.73□□□□□ -0.85
VRK1-201ENST00000216639 KRTAP13-3Q3SY46 172 aa9.73□□□□□ -0.85
VRK1-201ENST00000216639 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
VRK1-201ENST00000216639 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
VRK1-201ENST00000216639 KRTAP10-8P60410 259 aa9.69□□□□□ -0.86
VRK1-201ENST00000216639 PRR4Q16378 134 aa9.69□□□□□ -0.86
VRK1-201ENST00000216639 Q8N1X5 172 aa9.67□□□□□ -0.86
VRK1-201ENST00000216639 IGLV7-46A0A075B6I9 117 aa9.66□□□□□ -0.86
VRK1-201ENST00000216639 HSPG2P98160 4391 aa9.65□□□□□ -0.86
VRK1-201ENST00000216639 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
VRK1-201ENST00000216639 RETNLBQ9BQ08 111 aa9.64□□□□□ -0.87
VRK1-201ENST00000216639 RYR1P21817 5038 aa9.64□□□□□ -0.87
VRK1-201ENST00000216639 IGKV2-30P06310 120 aa9.59□□□□□ -0.87
VRK1-201ENST00000216639 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
VRK1-201ENST00000216639 KRTAP17-1Q9BYP8 105 aa9.58□□□□□ -0.88
VRK1-201ENST00000216639 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
VRK1-201ENST00000216639 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
VRK1-201ENST00000216639 A8MUU9 505 aa9.53□□□□□ -0.88
VRK1-201ENST00000216639 FP248Q71RG6 208 aaPredicted RBP9.53□□□□□ -0.88
VRK1-201ENST00000216639 IGKV2D-30A0A075B6S6 120 aa9.51□□□□□ -0.89
VRK1-201ENST00000216639 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
VRK1-201ENST00000216639 HRES1P13985 223 aa9.5□□□□□ -0.89
VRK1-201ENST00000216639 KIAA1109Q2LD37 5005 aa9.49□□□□□ -0.89
VRK1-201ENST00000216639 COA5Q86WW8 74 aa9.48□□□□□ -0.89
VRK1-201ENST00000216639 MT1HL1P0DM35 61 aa9.46□□□□□ -0.89
VRK1-201ENST00000216639 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.89
VRK1-201ENST00000216639 TNXBP22105 4242 aa9.46□□□□□ -0.9
VRK1-201ENST00000216639 LCE2BO14633 110 aa9.44□□□□□ -0.9
VRK1-201ENST00000216639 Q75L30 129 aa9.44□□□□□ -0.9
VRK1-201ENST00000216639 MPLKIPQ8TAP9 179 aa9.43□□□□□ -0.9
VRK1-201ENST00000216639 ACYP2P14621 99 aa9.42□□□□□ -0.9
VRK1-201ENST00000216639 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
VRK1-201ENST00000216639 C4orf26Q17RF5 130 aa9.41□□□□□ -0.9
VRK1-201ENST00000216639 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
VRK1-201ENST00000216639 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
VRK1-201ENST00000216639 Q1T7F1 81 aa9.38□□□□□ -0.91
VRK1-201ENST00000216639 V9GYY9 64 aa9.38□□□□□ -0.91
VRK1-201ENST00000216639 ATP11AUNQ6ZP68 121 aa9.32□□□□□ -0.92
VRK1-201ENST00000216639 HERC2O95714 4834 aa9.3□□□□□ -0.92
VRK1-201ENST00000216639 CHKB-CPT1BH3BT56 60 aa9.3□□□□□ -0.92
VRK1-201ENST00000216639 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
VRK1-201ENST00000216639 KRTAP4-5Q9BYR2 181 aa9.29□□□□□ -0.92
VRK1-201ENST00000216639 SPINK7P58062 85 aa9.28□□□□□ -0.92
VRK1-201ENST00000216639 DMBT1Q9UGM3 2413 aaPredicted RBP9.28□□□□□ -0.92
VRK1-201ENST00000216639 XP32Q5T750 250 aa9.28□□□□□ -0.92
VRK1-201ENST00000216639 A8MUN3 132 aa9.27□□□□□ -0.93
VRK1-201ENST00000216639 PSPHP1O15172 72 aa9.2□□□□□ -0.94
VRK1-201ENST00000216639 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
VRK1-201ENST00000216639 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
VRK1-201ENST00000216639 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
VRK1-201ENST00000216639 PRR15LQ9BU68 103 aa9.16□□□□□ -0.94
VRK1-201ENST00000216639 J3QL48 77 aa9.15□□□□□ -0.94
VRK1-201ENST00000216639 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
VRK1-201ENST00000216639 Q5VV11 94 aa9.09□□□□□ -0.95
VRK1-201ENST00000216639 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
VRK1-201ENST00000216639 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
VRK1-201ENST00000216639 KRTAP3-1Q9BYR8 98 aa9.05□□□□□ -0.96
VRK1-201ENST00000216639 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
VRK1-201ENST00000216639 BRK1Q8WUW1 75 aa9.03□□□□□ -0.96
VRK1-201ENST00000216639 A0A1B0GU69 56 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms