RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 KRTAP10-2P60368 255 aa12.98□□□□□ -0.33
NIPSNAP1-201ENST00000216121 ALMS1Q8TCU4 4167 aa12.98□□□□□ -0.33
NIPSNAP1-201ENST00000216121 IGLV7-46A0A075B6I9 117 aa12.97□□□□□ -0.33
NIPSNAP1-201ENST00000216121 NDUFS5O43920 106 aa12.97□□□□□ -0.33
NIPSNAP1-201ENST00000216121 DNAH5Q8TE73 4624 aa12.97□□□□□ -0.33
NIPSNAP1-201ENST00000216121 SSBP3-AS1Q7Z2R9 100 aa12.96□□□□□ -0.33
NIPSNAP1-201ENST00000216121 BRK1Q8WUW1 75 aa12.94□□□□□ -0.34
NIPSNAP1-201ENST00000216121 SPINK6Q6UWN8 80 aa12.92□□□□□ -0.34
NIPSNAP1-201ENST00000216121 PCOTHQ58A44 107 aa12.91□□□□□ -0.34
NIPSNAP1-201ENST00000216121 V9GYY9 64 aa12.9□□□□□ -0.34
NIPSNAP1-201ENST00000216121 Q6ZSA8 131 aa12.88□□□□□ -0.35
NIPSNAP1-201ENST00000216121 PSPHP1O15172 72 aa12.85□□□□□ -0.35
NIPSNAP1-201ENST00000216121 COA5Q86WW8 74 aa12.84□□□□□ -0.35
NIPSNAP1-201ENST00000216121 KRTAP10-1P60331 282 aa12.82□□□□□ -0.36
NIPSNAP1-201ENST00000216121 C1orf195Q5TG92 126 aa12.81□□□□□ -0.36
NIPSNAP1-201ENST00000216121 Q8N9P0 234 aaPredicted RBP12.81□□□□□ -0.36
NIPSNAP1-201ENST00000216121 C8orf87E5RJ46 101 aa12.81□□□□□ -0.36
NIPSNAP1-201ENST00000216121 PKD1P98161 4303 aa12.79□□□□□ -0.36
NIPSNAP1-201ENST00000216121 KRTAP13-3Q3SY46 172 aa12.79□□□□□ -0.36
NIPSNAP1-201ENST00000216121 KRTAP13-2Q52LG2 175 aa12.79□□□□□ -0.36
NIPSNAP1-201ENST00000216121 A8MUN3 132 aa12.78□□□□□ -0.36
NIPSNAP1-201ENST00000216121 Q5W150 140 aa12.78□□□□□ -0.36
NIPSNAP1-201ENST00000216121 LOC101927531A0A1B0GV80 90 aa12.77□□□□□ -0.36
NIPSNAP1-201ENST00000216121 LIMD2Q9BT23 127 aa12.77□□□□□ -0.37
NIPSNAP1-201ENST00000216121 FAT2Q9NYQ8 4349 aa12.75□□□□□ -0.37
NIPSNAP1-201ENST00000216121 LRP1BQ9NZR2 4599 aa12.74□□□□□ -0.37
NIPSNAP1-201ENST00000216121 HYDINQ4G0P3 5121 aa12.72□□□□□ -0.37
NIPSNAP1-201ENST00000216121 Q5VV11 94 aa12.72□□□□□ -0.37
NIPSNAP1-201ENST00000216121 LINC00313P59037 77 aa12.7□□□□□ -0.38
NIPSNAP1-201ENST00000216121 KRTAP1-4P0C5Y4 121 aa12.68□□□□□ -0.38
NIPSNAP1-201ENST00000216121 HRES1P13985 223 aa12.66□□□□□ -0.38
NIPSNAP1-201ENST00000216121 PRR15LQ9BU68 103 aa12.64□□□□□ -0.39
NIPSNAP1-201ENST00000216121 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
NIPSNAP1-201ENST00000216121 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
NIPSNAP1-201ENST00000216121 CHKB-CPT1BH3BT56 60 aa12.57□□□□□ -0.4
NIPSNAP1-201ENST00000216121 KRTAP16-1A8MUX0 517 aa12.56□□□□□ -0.4
NIPSNAP1-201ENST00000216121 Q75L30 129 aa12.56□□□□□ -0.4
NIPSNAP1-201ENST00000216121 LINC01558Q9Y6Z2 57 aa12.56□□□□□ -0.4
NIPSNAP1-201ENST00000216121 SPAG11AQ6PDA7 123 aa12.54□□□□□ -0.4
NIPSNAP1-201ENST00000216121 PLA2G1BP04054 148 aaKnown RBP12.53□□□□□ -0.4
NIPSNAP1-201ENST00000216121 C4orf48Q5BLP8 95 aa12.5□□□□□ -0.41
NIPSNAP1-201ENST00000216121 IGKV2-30P06310 120 aa12.49□□□□□ -0.41
NIPSNAP1-201ENST00000216121 KRTAP21-3Q3LHN1 58 aa12.49□□□□□ -0.41
NIPSNAP1-201ENST00000216121 TYMSOSQ8TAI1 123 aa12.49□□□□□ -0.41
NIPSNAP1-201ENST00000216121 ACYP2P14621 99 aa12.49□□□□□ -0.41
NIPSNAP1-201ENST00000216121 RETNLBQ9BQ08 111 aa12.48□□□□□ -0.41
NIPSNAP1-201ENST00000216121 SPINK1P00995 79 aa12.47□□□□□ -0.41
NIPSNAP1-201ENST00000216121 DMAC1Q96GE9 116 aa12.46□□□□□ -0.42
NIPSNAP1-201ENST00000216121 A8MU10 97 aa12.45□□□□□ -0.42
NIPSNAP1-201ENST00000216121 PRR26Q8N8Z3 221 aa12.43□□□□□ -0.42
NIPSNAP1-201ENST00000216121 A6NED7 52 aa12.41□□□□□ -0.42
NIPSNAP1-201ENST00000216121 LCA10Q71F78 164 aa12.38□□□□□ -0.43
NIPSNAP1-201ENST00000216121 PKHD1P08F94 4074 aa12.37□□□□□ -0.43
NIPSNAP1-201ENST00000216121 SACSQ9NZJ4 4579 aa12.36□□□□□ -0.43
NIPSNAP1-201ENST00000216121 RPS29P62273 56 aaKnown RBP12.34□□□□□ -0.43
NIPSNAP1-201ENST00000216121 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
NIPSNAP1-201ENST00000216121 CDC42SE1Q9NRR8 79 aa12.3□□□□□ -0.44
NIPSNAP1-201ENST00000216121 IGKV2D-30A0A075B6S6 120 aa12.29□□□□□ -0.44
NIPSNAP1-201ENST00000216121 ATP11AUNQ6ZP68 121 aa12.26□□□□□ -0.45
NIPSNAP1-201ENST00000216121 SPINK7P58062 85 aa12.25□□□□□ -0.45
NIPSNAP1-201ENST00000216121 DYNC1H1Q14204 4646 aaKnown RBP12.25□□□□□ -0.45
NIPSNAP1-201ENST00000216121 PMAIP1Q13794 54 aa12.24□□□□□ -0.45
NIPSNAP1-201ENST00000216121 SMR3BP02814 79 aaPredicted RBP12.23□□□□□ -0.45
NIPSNAP1-201ENST00000216121 A0A1B0GVY2 172 aa12.21□□□□□ -0.46
NIPSNAP1-201ENST00000216121 SPTSSBQ8NFR3 76 aa12.21□□□□□ -0.46
NIPSNAP1-201ENST00000216121 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
NIPSNAP1-201ENST00000216121 C7orf65Q6ZTY9 151 aa12.15□□□□□ -0.46
NIPSNAP1-201ENST00000216121 PKHD1L1Q86WI1 4243 aa12.13□□□□□ -0.47
NIPSNAP1-201ENST00000216121 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
NIPSNAP1-201ENST00000216121 A0A1B0GU69 56 aa12.1□□□□□ -0.47
NIPSNAP1-201ENST00000216121 FAT1Q14517 4588 aa12.08□□□□□ -0.47
NIPSNAP1-201ENST00000216121 A6NN06 94 aa12.06□□□□□ -0.48
NIPSNAP1-201ENST00000216121 A8MUU9 505 aa12.04□□□□□ -0.48
NIPSNAP1-201ENST00000216121 C20orf166-AS1Q96NR2 134 aa12.04□□□□□ -0.48
NIPSNAP1-201ENST00000216121 C9orf92A6NGG3 77 aa12.01□□□□□ -0.49
NIPSNAP1-201ENST00000216121 Q8N1X5 172 aa11.98□□□□□ -0.49
NIPSNAP1-201ENST00000216121 KTN1-AS1Q86SY8 53 aa11.97□□□□□ -0.49
NIPSNAP1-201ENST00000216121 RYR2Q92736 4967 aa11.94□□□□□ -0.5
NIPSNAP1-201ENST00000216121 SPATA8Q6RVD6 105 aa11.91□□□□□ -0.5
NIPSNAP1-201ENST00000216121 UQCR11O14957 56 aa11.88□□□□□ -0.51
NIPSNAP1-201ENST00000216121 MIR22HGQ0VDD5 57 aa11.83□□□□□ -0.52
NIPSNAP1-201ENST00000216121 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
NIPSNAP1-201ENST00000216121 KRTAP3-1Q9BYR8 98 aa11.79□□□□□ -0.52
NIPSNAP1-201ENST00000216121 SEC61GP60059 68 aa11.76□□□□□ -0.53
NIPSNAP1-201ENST00000216121 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
NIPSNAP1-201ENST00000216121 TNXBP22105 4242 aa11.7□□□□□ -0.54
NIPSNAP1-201ENST00000216121 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
NIPSNAP1-201ENST00000216121 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
NIPSNAP1-201ENST00000216121 COX6B2Q6YFQ2 88 aa11.63□□□□□ -0.55
NIPSNAP1-201ENST00000216121 LRP1Q07954 4544 aaKnown RBP11.62□□□□□ -0.55
NIPSNAP1-201ENST00000216121 Q5VSD8 79 aa11.62□□□□□ -0.55
NIPSNAP1-201ENST00000216121 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
NIPSNAP1-201ENST00000216121 HSPG2P98160 4391 aa11.6□□□□□ -0.55
NIPSNAP1-201ENST00000216121 RPL37P61927 97 aaKnown RBP11.5□□□□□ -0.57
NIPSNAP1-201ENST00000216121 H0YAA0 97 aa11.49□□□□□ -0.57
NIPSNAP1-201ENST00000216121 A0A1B0GU33 70 aa11.48□□□□□ -0.57
NIPSNAP1-201ENST00000216121 RYR1P21817 5038 aa11.45□□□□□ -0.58
NIPSNAP1-201ENST00000216121 H1FX-AS1Q4G0G2 97 aa11.44□□□□□ -0.58
NIPSNAP1-201ENST00000216121 XP32Q5T750 250 aa11.44□□□□□ -0.58
NIPSNAP1-201ENST00000216121 ADM2Q7Z4H4 148 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms