RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 KRTAP16-1A8MUX0 517 aa9.15□□□□□ -0.94
MRPL28-201ENST00000199706 C8orf87E5RJ46 101 aa9.15□□□□□ -0.94
MRPL28-201ENST00000199706 LCE2CQ5TA81 110 aa9.15□□□□□ -0.94
MRPL28-201ENST00000199706 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
MRPL28-201ENST00000199706 DEFB116Q30KQ4 102 aa9.14□□□□□ -0.95
MRPL28-201ENST00000199706 SPCS1Q9Y6A9 102 aa9.13□□□□□ -0.95
MRPL28-201ENST00000199706 IGHV6-1A0A0B4J1U7 121 aa9.11□□□□□ -0.95
MRPL28-201ENST00000199706 NOTCH2NLQ7Z3S9 236 aa9.09□□□□□ -0.95
MRPL28-201ENST00000199706 NDUFB1O75438 58 aa9.08□□□□□ -0.96
MRPL28-201ENST00000199706 A8MWP4 228 aa9.07□□□□□ -0.96
MRPL28-201ENST00000199706 MTURNQ8N3F0 131 aa9.06□□□□□ -0.96
MRPL28-201ENST00000199706 K7EP34 96 aa9.03□□□□□ -0.96
MRPL28-201ENST00000199706 NREPQ16612 68 aa9.03□□□□□ -0.96
MRPL28-201ENST00000199706 MT1HP80294 61 aa9.02□□□□□ -0.97
MRPL28-201ENST00000199706 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
MRPL28-201ENST00000199706 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
MRPL28-201ENST00000199706 PRO0461Q9UI25 63 aa9.01□□□□□ -0.97
MRPL28-201ENST00000199706 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
MRPL28-201ENST00000199706 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
MRPL28-201ENST00000199706 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
MRPL28-201ENST00000199706 Q8N9P0 234 aaPredicted RBP8.98□□□□□ -0.97
MRPL28-201ENST00000199706 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
MRPL28-201ENST00000199706 GTF2H5Q6ZYL4 71 aa8.96□□□□□ -0.98
MRPL28-201ENST00000199706 ZCCHC13Q8WW36 166 aaKnown RBP8.92□□□□□ -0.98
MRPL28-201ENST00000199706 Q6ZVQ6 151 aa8.91□□□□□ -0.98
MRPL28-201ENST00000199706 F8W1H4 67 aa8.89□□□□□ -0.99
MRPL28-201ENST00000199706 BPY2O14599 106 aa8.89□□□□□ -0.99
MRPL28-201ENST00000199706 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
MRPL28-201ENST00000199706 MMP24-AS1A0A0U1RRL7 71 aa8.88□□□□□ -0.99
MRPL28-201ENST00000199706 K7EQZ3 153 aa8.87□□□□□ -0.99
MRPL28-201ENST00000199706 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
MRPL28-201ENST00000199706 KRTAP9-2Q9BYQ4 174 aa8.87□□□□□ -0.99
MRPL28-201ENST00000199706 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
MRPL28-201ENST00000199706 HRES1P13985 223 aa8.84□□□□□ -0.99
MRPL28-201ENST00000199706 hDV103S1A0JD37 113 aa8.83□□□□□ -1
MRPL28-201ENST00000199706 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
MRPL28-201ENST00000199706 UBL5Q9BZL1 73 aa8.83□□□□□ -1
MRPL28-201ENST00000199706 M0R2T5 61 aa8.82□□□□□ -1
MRPL28-201ENST00000199706 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
MRPL28-201ENST00000199706 LINC00846Q9NV44 126 aa8.81□□□□□ -1
MRPL28-201ENST00000199706 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
MRPL28-201ENST00000199706 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
MRPL28-201ENST00000199706 A0A1B0GV90 55 aa8.78□□□□□ -1
MRPL28-201ENST00000199706 SPINK7P58062 85 aa8.78□□□□□ -1
MRPL28-201ENST00000199706 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
MRPL28-201ENST00000199706 FAM236DA0A1B0GTK5 79 aa8.73□□□□□ -1.01
MRPL28-201ENST00000199706 FAM236CP0DP71 79 aa8.73□□□□□ -1.01
MRPL28-201ENST00000199706 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
MRPL28-201ENST00000199706 Q8N9L7 120 aa8.72□□□□□ -1.01
MRPL28-201ENST00000199706 CXCL6P80162 114 aa8.71□□□□□ -1.02
MRPL28-201ENST00000199706 NDUFS5O43920 106 aa8.69□□□□□ -1.02
MRPL28-201ENST00000199706 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
MRPL28-201ENST00000199706 HCG22E2RYF7 251 aa8.67□□□□□ -1.02
MRPL28-201ENST00000199706 FAM240AA0A1B0GVK7 77 aa8.66□□□□□ -1.02
MRPL28-201ENST00000199706 ACYP1P07311 99 aa8.66□□□□□ -1.02
MRPL28-201ENST00000199706 Q5W150 140 aa8.61□□□□□ -1.03
MRPL28-201ENST00000199706 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
MRPL28-201ENST00000199706 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
MRPL28-201ENST00000199706 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
MRPL28-201ENST00000199706 TP53AIP1Q9HCN2 124 aa8.56□□□□□ -1.04
MRPL28-201ENST00000199706 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
MRPL28-201ENST00000199706 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
MRPL28-201ENST00000199706 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
MRPL28-201ENST00000199706 FSIP2Q5CZC0 6907 aa8.5□□□□□ -1.05
MRPL28-201ENST00000199706 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
MRPL28-201ENST00000199706 MT2AP02795 61 aa8.46□□□□□ -1.06
MRPL28-201ENST00000199706 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
MRPL28-201ENST00000199706 CRCT1Q9UGL9 99 aa8.42□□□□□ -1.06
MRPL28-201ENST00000199706 MT1FP04733 61 aa8.38□□□□□ -1.07
MRPL28-201ENST00000199706 C4orf26Q17RF5 130 aa8.37□□□□□ -1.07
MRPL28-201ENST00000199706 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
MRPL28-201ENST00000199706 TRAV22A0A0B4J277 110 aa8.35□□□□□ -1.07
MRPL28-201ENST00000199706 J3QR89 54 aa8.35□□□□□ -1.07
MRPL28-201ENST00000199706 K7ERU9 68 aa8.33□□□□□ -1.08
MRPL28-201ENST00000199706 KRTAP10-10P60014 251 aa8.33□□□□□ -1.08
MRPL28-201ENST00000199706 LOC101927531A0A1B0GV80 90 aa8.31□□□□□ -1.08
MRPL28-201ENST00000199706 UQCRQO14949 82 aa8.31□□□□□ -1.08
MRPL28-201ENST00000199706 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
MRPL28-201ENST00000199706 CYP4F30PQ9H0H9 118 aa8.3□□□□□ -1.08
MRPL28-201ENST00000199706 ATOX1O00244 68 aa8.29□□□□□ -1.08
MRPL28-201ENST00000199706 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
MRPL28-201ENST00000199706 C1orf64Q8NEQ6 169 aa8.27□□□□□ -1.09
MRPL28-201ENST00000199706 USH2AO75445 5202 aa8.27□□□□□ -1.09
MRPL28-201ENST00000199706 A0A087WVE0 104 aa8.26□□□□□ -1.09
MRPL28-201ENST00000199706 H0Y9P7 68 aa8.21□□□□□ -1.1
MRPL28-201ENST00000199706 S4R3F8 94 aa8.21□□□□□ -1.1
MRPL28-201ENST00000199706 LCE2BO14633 110 aa8.19□□□□□ -1.1
MRPL28-201ENST00000199706 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
MRPL28-201ENST00000199706 SSPOA2VEC9 5147 aa8.15□□□□□ -1.1
MRPL28-201ENST00000199706 SVIPQ8NHG7 77 aa8.15□□□□□ -1.1
MRPL28-201ENST00000199706 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
MRPL28-201ENST00000199706 LCA10Q71F78 164 aa8.14□□□□□ -1.11
MRPL28-201ENST00000199706 MP68P56378 58 aa8.12□□□□□ -1.11
MRPL28-201ENST00000199706 C5orf47Q569G3 176 aa8.12□□□□□ -1.11
MRPL28-201ENST00000199706 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
MRPL28-201ENST00000199706 A8MUN3 132 aa8.08□□□□□ -1.12
MRPL28-201ENST00000199706 H3BPC8 53 aa8.08□□□□□ -1.12
MRPL28-201ENST00000199706 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
MRPL28-201ENST00000199706 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
MRPL28-201ENST00000199706 SCGB1A1P11684 91 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms