RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
LAPTM4A-201ENST00000175091 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
LAPTM4A-201ENST00000175091 C1orf195Q5TG92 126 aa8.94□□□□□ -0.98
LAPTM4A-201ENST00000175091 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
LAPTM4A-201ENST00000175091 IGHV6-1A0A0B4J1U7 121 aa8.93□□□□□ -0.98
LAPTM4A-201ENST00000175091 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
LAPTM4A-201ENST00000175091 hDV103S1A0JD37 113 aa8.91□□□□□ -0.98
LAPTM4A-201ENST00000175091 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.98
LAPTM4A-201ENST00000175091 KRTAP17-1Q9BYP8 105 aa8.9□□□□□ -0.98
LAPTM4A-201ENST00000175091 C20orf197Q8N268 126 aa8.89□□□□□ -0.99
LAPTM4A-201ENST00000175091 CYSTM1Q9H1C7 97 aa8.89□□□□□ -0.99
LAPTM4A-201ENST00000175091 TNXBP22105 4242 aa8.88□□□□□ -0.99
LAPTM4A-201ENST00000175091 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
LAPTM4A-201ENST00000175091 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
LAPTM4A-201ENST00000175091 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
LAPTM4A-201ENST00000175091 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
LAPTM4A-201ENST00000175091 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
LAPTM4A-201ENST00000175091 Q8N1X5 172 aa8.84□□□□□ -0.99
LAPTM4A-201ENST00000175091 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
LAPTM4A-201ENST00000175091 SNURFQ9Y675 71 aa8.81□□□□□ -1
LAPTM4A-201ENST00000175091 A0A0U1RQV1 116 aa8.81□□□□□ -1
LAPTM4A-201ENST00000175091 C5orf47Q569G3 176 aa8.79□□□□□ -1
LAPTM4A-201ENST00000175091 MYCBP2O75592 4640 aa8.79□□□□□ -1
LAPTM4A-201ENST00000175091 KRTAP10-8P60410 259 aa8.78□□□□□ -1
LAPTM4A-201ENST00000175091 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
LAPTM4A-201ENST00000175091 LINC00313P59037 77 aa8.77□□□□□ -1.01
LAPTM4A-201ENST00000175091 TP53AIP1Q9HCN2 124 aa8.77□□□□□ -1.01
LAPTM4A-201ENST00000175091 H7BZZ5 65 aa8.75□□□□□ -1.01
LAPTM4A-201ENST00000175091 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
LAPTM4A-201ENST00000175091 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 NDUFS5O43920 106 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 TMEM258P61165 79 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 H0Y9P7 68 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 NDUFC1O43677 76 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 MP68P56378 58 aa8.73□□□□□ -1.01
LAPTM4A-201ENST00000175091 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.02
LAPTM4A-201ENST00000175091 H3BPC8 53 aa8.7□□□□□ -1.02
LAPTM4A-201ENST00000175091 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
LAPTM4A-201ENST00000175091 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
LAPTM4A-201ENST00000175091 MT1HL1P0DM35 61 aa8.67□□□□□ -1.02
LAPTM4A-201ENST00000175091 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.02
LAPTM4A-201ENST00000175091 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
LAPTM4A-201ENST00000175091 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
LAPTM4A-201ENST00000175091 FAM236DA0A1B0GTK5 79 aa8.63□□□□□ -1.03
LAPTM4A-201ENST00000175091 FAM236CP0DP71 79 aa8.63□□□□□ -1.03
LAPTM4A-201ENST00000175091 Q5W150 140 aa8.62□□□□□ -1.03
LAPTM4A-201ENST00000175091 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
LAPTM4A-201ENST00000175091 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
LAPTM4A-201ENST00000175091 OXTP01178 125 aa8.58□□□□□ -1.04
LAPTM4A-201ENST00000175091 HERC2O95714 4834 aa8.58□□□□□ -1.04
LAPTM4A-201ENST00000175091 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
LAPTM4A-201ENST00000175091 C9orf92A6NGG3 77 aa8.57□□□□□ -1.04
LAPTM4A-201ENST00000175091 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
LAPTM4A-201ENST00000175091 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
LAPTM4A-201ENST00000175091 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
LAPTM4A-201ENST00000175091 C20orf166-AS1Q96NR2 134 aa8.53□□□□□ -1.04
LAPTM4A-201ENST00000175091 A8MUU9 505 aa8.52□□□□□ -1.05
LAPTM4A-201ENST00000175091 SVIPQ8NHG7 77 aa8.52□□□□□ -1.05
LAPTM4A-201ENST00000175091 SPANXA2-OT1Q8N9U9 137 aa8.49□□□□□ -1.05
LAPTM4A-201ENST00000175091 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
LAPTM4A-201ENST00000175091 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
LAPTM4A-201ENST00000175091 IGKV2-30P06310 120 aa8.46□□□□□ -1.05
LAPTM4A-201ENST00000175091 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
LAPTM4A-201ENST00000175091 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
LAPTM4A-201ENST00000175091 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
LAPTM4A-201ENST00000175091 Q75L30 129 aa8.43□□□□□ -1.06
LAPTM4A-201ENST00000175091 PRR4Q16378 134 aa8.43□□□□□ -1.06
LAPTM4A-201ENST00000175091 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
LAPTM4A-201ENST00000175091 XP32Q5T750 250 aa8.37□□□□□ -1.07
LAPTM4A-201ENST00000175091 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
LAPTM4A-201ENST00000175091 HRES1P13985 223 aa8.35□□□□□ -1.07
LAPTM4A-201ENST00000175091 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
LAPTM4A-201ENST00000175091 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
LAPTM4A-201ENST00000175091 J3QL48 77 aa8.31□□□□□ -1.08
LAPTM4A-201ENST00000175091 ATP11AUNQ6ZP68 121 aa8.27□□□□□ -1.09
LAPTM4A-201ENST00000175091 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
LAPTM4A-201ENST00000175091 LPAP08519 4548 aa8.26□□□□□ -1.09
LAPTM4A-201ENST00000175091 LRP2P98164 4655 aa8.25□□□□□ -1.09
LAPTM4A-201ENST00000175091 SPINK7P58062 85 aa8.24□□□□□ -1.09
LAPTM4A-201ENST00000175091 COA5Q86WW8 74 aa8.24□□□□□ -1.09
LAPTM4A-201ENST00000175091 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
LAPTM4A-201ENST00000175091 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
LAPTM4A-201ENST00000175091 ACYP2P14621 99 aa8.17□□□□□ -1.1
LAPTM4A-201ENST00000175091 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
LAPTM4A-201ENST00000175091 A8MUN3 132 aa8.12□□□□□ -1.11
LAPTM4A-201ENST00000175091 HERC1Q15751 4861 aa8.08□□□□□ -1.12
LAPTM4A-201ENST00000175091 MPLKIPQ8TAP9 179 aa8.07□□□□□ -1.12
LAPTM4A-201ENST00000175091 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
LAPTM4A-201ENST00000175091 Q1T7F1 81 aa8.06□□□□□ -1.12
LAPTM4A-201ENST00000175091 COX6B2Q6YFQ2 88 aa8.06□□□□□ -1.12
LAPTM4A-201ENST00000175091 CHKB-CPT1BH3BT56 60 aa8.05□□□□□ -1.12
LAPTM4A-201ENST00000175091 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
LAPTM4A-201ENST00000175091 V9GYY9 64 aa8□□□□□ -1.13
LAPTM4A-201ENST00000175091 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
LAPTM4A-201ENST00000175091 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
LAPTM4A-201ENST00000175091 LINC01558Q9Y6Z2 57 aa7.93□□□□□ -1.14
LAPTM4A-201ENST00000175091 PSPHP1O15172 72 aa7.9□□□□□ -1.14
LAPTM4A-201ENST00000175091 PRR15LQ9BU68 103 aa7.88□□□□□ -1.15
LAPTM4A-201ENST00000175091 Q5VV11 94 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms