RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 KRTAP7-1Q8IUC3 87 aa7.02□□□□□ -1.29
TRO-201ENST00000173898 M0R2T5 61 aa7□□□□□ -1.29
TRO-201ENST00000173898 NF1P21359 2839 aa7□□□□□ -1.29
TRO-201ENST00000173898 R4GN34 69 aa6.99□□□□□ -1.29
TRO-201ENST00000173898 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
TRO-201ENST00000173898 FBN2P35556 2912 aa6.96□□□□□ -1.3
TRO-201ENST00000173898 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
TRO-201ENST00000173898 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
TRO-201ENST00000173898 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
TRO-201ENST00000173898 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
TRO-201ENST00000173898 TNRC18O15417 2968 aaPredicted RBP6.94□□□□□ -1.3
TRO-201ENST00000173898 LOC400499M0QZD8 3231 aa6.92□□□□□ -1.3
TRO-201ENST00000173898 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
TRO-201ENST00000173898 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
TRO-201ENST00000173898 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
TRO-201ENST00000173898 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
TRO-201ENST00000173898 MYO15AQ9UKN7 3530 aa6.86□□□□□ -1.31
TRO-201ENST00000173898 ROMO1P60602 79 aa6.86□□□□□ -1.31
TRO-201ENST00000173898 M0QZ58 72 aa6.85□□□□□ -1.31
TRO-201ENST00000173898 HRNRQ86YZ3 2850 aaPredicted RBP6.84□□□□□ -1.31
TRO-201ENST00000173898 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
TRO-201ENST00000173898 MUC3AQ02505 3323 aa6.81□□□□□ -1.32
TRO-201ENST00000173898 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
TRO-201ENST00000173898 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
TRO-201ENST00000173898 H3BS24 57 aa6.77□□□□□ -1.33
TRO-201ENST00000173898 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
TRO-201ENST00000173898 A8MU10 97 aa6.72□□□□□ -1.33
TRO-201ENST00000173898 MXRA5Q9NR99 2828 aa6.71□□□□□ -1.33
TRO-201ENST00000173898 A6NN06 94 aa6.71□□□□□ -1.34
TRO-201ENST00000173898 DMDP11532 3685 aa6.7□□□□□ -1.34
TRO-201ENST00000173898 DCHS1Q96JQ0 3298 aa6.69□□□□□ -1.34
TRO-201ENST00000173898 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
TRO-201ENST00000173898 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
TRO-201ENST00000173898 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
TRO-201ENST00000173898 A8MUU9 505 aa6.61□□□□□ -1.35
TRO-201ENST00000173898 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
TRO-201ENST00000173898 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
TRO-201ENST00000173898 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
TRO-201ENST00000173898 WDFY3Q8IZQ1 3526 aa6.58□□□□□ -1.36
TRO-201ENST00000173898 RELNP78509 3460 aa6.58□□□□□ -1.36
TRO-201ENST00000173898 PDZD2O15018 2839 aa6.55□□□□□ -1.36
TRO-201ENST00000173898 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
TRO-201ENST00000173898 VWFP04275 2813 aa6.53□□□□□ -1.36
TRO-201ENST00000173898 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
TRO-201ENST00000173898 TGP01266 2768 aa6.51□□□□□ -1.37
TRO-201ENST00000173898 KRTAP21-3Q3LHN1 58 aa6.47□□□□□ -1.37
TRO-201ENST00000173898 FBN1P35555 2871 aaKnown RBP6.45□□□□□ -1.38
TRO-201ENST00000173898 ASPMQ8IZT6 3477 aa6.44□□□□□ -1.38
TRO-201ENST00000173898 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
TRO-201ENST00000173898 XP32Q5T750 250 aa6.39□□□□□ -1.39
TRO-201ENST00000173898 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
TRO-201ENST00000173898 LAMA5O15230 3695 aa6.37□□□□□ -1.39
TRO-201ENST00000173898 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
TRO-201ENST00000173898 TNP1P09430 55 aa6.33□□□□□ -1.4
TRO-201ENST00000173898 H0YAA0 97 aa6.32□□□□□ -1.4
TRO-201ENST00000173898 ZFHX4Q86UP3 3567 aa6.31□□□□□ -1.4
TRO-201ENST00000173898 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
TRO-201ENST00000173898 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
TRO-201ENST00000173898 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
TRO-201ENST00000173898 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
TRO-201ENST00000173898 P0C880 135 aa6.19□□□□□ -1.42
TRO-201ENST00000173898 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
TRO-201ENST00000173898 CSMD1Q96PZ7 3565 aa6.18□□□□□ -1.42
TRO-201ENST00000173898 SPENQ96T58 3664 aaKnown RBP6.17□□□□□ -1.42
TRO-201ENST00000173898 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
TRO-201ENST00000173898 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
TRO-201ENST00000173898 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
TRO-201ENST00000173898 ZFHX3Q15911 3703 aa6.15□□□□□ -1.42
TRO-201ENST00000173898 CUBNO60494 3623 aa6.13□□□□□ -1.43
TRO-201ENST00000173898 NBPF19A0A087WUL8 3843 aa6.08□□□□□ -1.44
TRO-201ENST00000173898 BSNQ9UPA5 3926 aa6.07□□□□□ -1.44
TRO-201ENST00000173898 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
TRO-201ENST00000173898 SMG1Q96Q15 3661 aaKnown RBP6.06□□□□□ -1.44
TRO-201ENST00000173898 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
TRO-201ENST00000173898 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
TRO-201ENST00000173898 SVEP1Q4LDE5 3571 aa6.01□□□□□ -1.45
TRO-201ENST00000173898 CSMD2Q7Z408 3487 aa5.99□□□□□ -1.45
TRO-201ENST00000173898 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
TRO-201ENST00000173898 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
TRO-201ENST00000173898 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
TRO-201ENST00000173898 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
TRO-201ENST00000173898 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
TRO-201ENST00000173898 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
TRO-201ENST00000173898 VPS13CQ709C8 3753 aa5.74□□□□□ -1.49
TRO-201ENST00000173898 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
TRO-201ENST00000173898 ANK3Q12955 4377 aaKnown RBP5.71□□□□□ -1.5
TRO-201ENST00000173898 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
TRO-201ENST00000173898 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
TRO-201ENST00000173898 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
TRO-201ENST00000173898 ZNF469Q96JG9 3925 aaPredicted RBP5.54□□□□□ -1.52
TRO-201ENST00000173898 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
TRO-201ENST00000173898 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
TRO-201ENST00000173898 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
TRO-201ENST00000173898 AKAP9Q99996 3911 aa5.38□□□□□ -1.55
TRO-201ENST00000173898 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
TRO-201ENST00000173898 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
TRO-201ENST00000173898 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
TRO-201ENST00000173898 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
TRO-201ENST00000173898 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
TRO-201ENST00000173898 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms