RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 KRTAP7-1Q8IUC3 87 aa7.02□□□□□ -1.29
TRO-201ENST00000173898 M0R2T5 61 aa7□□□□□ -1.29
TRO-201ENST00000173898 NF1P21359 2839 aa7□□□□□ -1.29
TRO-201ENST00000173898 R4GN34 69 aa6.99□□□□□ -1.29
TRO-201ENST00000173898 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
TRO-201ENST00000173898 FBN2P35556 2912 aa6.96□□□□□ -1.3
TRO-201ENST00000173898 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
TRO-201ENST00000173898 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
TRO-201ENST00000173898 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
TRO-201ENST00000173898 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
TRO-201ENST00000173898 TNRC18O15417 2968 aaPredicted RBP6.94□□□□□ -1.3
TRO-201ENST00000173898 LOC400499M0QZD8 3231 aa6.92□□□□□ -1.3
TRO-201ENST00000173898 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
TRO-201ENST00000173898 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
TRO-201ENST00000173898 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
TRO-201ENST00000173898 KRTAP13-1Q8IUC0 172 aa6.86□□□□□ -1.31
TRO-201ENST00000173898 MYO15AQ9UKN7 3530 aa6.86□□□□□ -1.31
TRO-201ENST00000173898 ROMO1P60602 79 aa6.86□□□□□ -1.31
TRO-201ENST00000173898 M0QZ58 72 aa6.85□□□□□ -1.31
TRO-201ENST00000173898 HRNRQ86YZ3 2850 aaPredicted RBP6.84□□□□□ -1.31
TRO-201ENST00000173898 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
TRO-201ENST00000173898 MUC3AQ02505 3323 aa6.81□□□□□ -1.32
TRO-201ENST00000173898 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
TRO-201ENST00000173898 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
TRO-201ENST00000173898 H3BS24 57 aa6.77□□□□□ -1.33
TRO-201ENST00000173898 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
TRO-201ENST00000173898 A8MU10 97 aa6.72□□□□□ -1.33
TRO-201ENST00000173898 MXRA5Q9NR99 2828 aa6.71□□□□□ -1.33
TRO-201ENST00000173898 A6NN06 94 aa6.71□□□□□ -1.34
TRO-201ENST00000173898 DMDP11532 3685 aa6.7□□□□□ -1.34
TRO-201ENST00000173898 DCHS1Q96JQ0 3298 aa6.69□□□□□ -1.34
TRO-201ENST00000173898 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
TRO-201ENST00000173898 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
TRO-201ENST00000173898 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
TRO-201ENST00000173898 A8MUU9 505 aa6.61□□□□□ -1.35
TRO-201ENST00000173898 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
TRO-201ENST00000173898 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
TRO-201ENST00000173898 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
TRO-201ENST00000173898 WDFY3Q8IZQ1 3526 aa6.58□□□□□ -1.36
TRO-201ENST00000173898 RELNP78509 3460 aa6.58□□□□□ -1.36
TRO-201ENST00000173898 PDZD2O15018 2839 aa6.55□□□□□ -1.36
TRO-201ENST00000173898 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
TRO-201ENST00000173898 VWFP04275 2813 aa6.53□□□□□ -1.36
TRO-201ENST00000173898 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
TRO-201ENST00000173898 TGP01266 2768 aa6.51□□□□□ -1.37
TRO-201ENST00000173898 KRTAP21-3Q3LHN1 58 aa6.47□□□□□ -1.37
TRO-201ENST00000173898 FBN1P35555 2871 aaKnown RBP6.45□□□□□ -1.38
TRO-201ENST00000173898 ASPMQ8IZT6 3477 aa6.44□□□□□ -1.38
TRO-201ENST00000173898 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
TRO-201ENST00000173898 XP32Q5T750 250 aa6.39□□□□□ -1.39
TRO-201ENST00000173898 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
TRO-201ENST00000173898 LAMA5O15230 3695 aa6.37□□□□□ -1.39
TRO-201ENST00000173898 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
TRO-201ENST00000173898 TNP1P09430 55 aa6.33□□□□□ -1.4
TRO-201ENST00000173898 H0YAA0 97 aa6.32□□□□□ -1.4
TRO-201ENST00000173898 ZFHX4Q86UP3 3567 aa6.31□□□□□ -1.4
TRO-201ENST00000173898 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
TRO-201ENST00000173898 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
TRO-201ENST00000173898 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
TRO-201ENST00000173898 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
TRO-201ENST00000173898 P0C880 135 aa6.19□□□□□ -1.42
TRO-201ENST00000173898 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
TRO-201ENST00000173898 CSMD1Q96PZ7 3565 aa6.18□□□□□ -1.42
TRO-201ENST00000173898 SPENQ96T58 3664 aaKnown RBP6.17□□□□□ -1.42
TRO-201ENST00000173898 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
TRO-201ENST00000173898 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
TRO-201ENST00000173898 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
TRO-201ENST00000173898 ZFHX3Q15911 3703 aa6.15□□□□□ -1.42
TRO-201ENST00000173898 CUBNO60494 3623 aa6.13□□□□□ -1.43
TRO-201ENST00000173898 NBPF19A0A087WUL8 3843 aa6.08□□□□□ -1.44
TRO-201ENST00000173898 BSNQ9UPA5 3926 aa6.07□□□□□ -1.44
TRO-201ENST00000173898 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
TRO-201ENST00000173898 SMG1Q96Q15 3661 aaKnown RBP6.06□□□□□ -1.44
TRO-201ENST00000173898 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
TRO-201ENST00000173898 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
TRO-201ENST00000173898 SVEP1Q4LDE5 3571 aa6.01□□□□□ -1.45
TRO-201ENST00000173898 CSMD2Q7Z408 3487 aa5.99□□□□□ -1.45
TRO-201ENST00000173898 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
TRO-201ENST00000173898 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
TRO-201ENST00000173898 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
TRO-201ENST00000173898 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
TRO-201ENST00000173898 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
TRO-201ENST00000173898 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
TRO-201ENST00000173898 VPS13CQ709C8 3753 aa5.74□□□□□ -1.49
TRO-201ENST00000173898 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
TRO-201ENST00000173898 ANK3Q12955 4377 aaKnown RBP5.71□□□□□ -1.5
TRO-201ENST00000173898 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
TRO-201ENST00000173898 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
TRO-201ENST00000173898 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
TRO-201ENST00000173898 ZNF469Q96JG9 3925 aaPredicted RBP5.54□□□□□ -1.52
TRO-201ENST00000173898 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
TRO-201ENST00000173898 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
TRO-201ENST00000173898 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
TRO-201ENST00000173898 AKAP9Q99996 3911 aa5.38□□□□□ -1.55
TRO-201ENST00000173898 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
TRO-201ENST00000173898 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
TRO-201ENST00000173898 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
TRO-201ENST00000173898 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
TRO-201ENST00000173898 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
TRO-201ENST00000173898 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms