RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 A0A1B0GVX0 72 aa7.83□□□□□ -1.16
ERCC1-201ENST00000013807 K7ERJ3 54 aa7.83□□□□□ -1.16
ERCC1-201ENST00000013807 A0A1B0GV72 72 aa7.82□□□□□ -1.16
ERCC1-201ENST00000013807 RBM3P98179 157 aaKnown RBP7.81□□□□□ -1.16
ERCC1-201ENST00000013807 PYY3Q5JQD4 70 aa7.81□□□□□ -1.16
ERCC1-201ENST00000013807 FCGBPQ9Y6R7 5405 aaPredicted RBP7.8□□□□□ -1.16
ERCC1-201ENST00000013807 C21orf62-AS1Q17RA5 79 aa7.8□□□□□ -1.16
ERCC1-201ENST00000013807 KRTAP10-10P60014 251 aa7.79□□□□□ -1.16
ERCC1-201ENST00000013807 J3KT08 172 aa7.78□□□□□ -1.16
ERCC1-201ENST00000013807 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
ERCC1-201ENST00000013807 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
ERCC1-201ENST00000013807 DSCR8Q96T75 97 aa7.77□□□□□ -1.17
ERCC1-201ENST00000013807 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
ERCC1-201ENST00000013807 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
ERCC1-201ENST00000013807 UQCR10Q9UDW1 63 aa7.75□□□□□ -1.17
ERCC1-201ENST00000013807 SPINK7P58062 85 aa7.74□□□□□ -1.17
ERCC1-201ENST00000013807 Q6ZQT0 140 aa7.74□□□□□ -1.17
ERCC1-201ENST00000013807 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
ERCC1-201ENST00000013807 C9JAW5 83 aa7.73□□□□□ -1.17
ERCC1-201ENST00000013807 SCGB1C2P0DMR2 95 aa7.72□□□□□ -1.17
ERCC1-201ENST00000013807 A0A1B0GW54 56 aa7.71□□□□□ -1.18
ERCC1-201ENST00000013807 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.18
ERCC1-201ENST00000013807 LOC105371267A0A1B0GV96 52 aa7.7□□□□□ -1.18
ERCC1-201ENST00000013807 NDUFB1O75438 58 aa7.69□□□□□ -1.18
ERCC1-201ENST00000013807 A8MWP4 228 aa7.66□□□□□ -1.18
ERCC1-201ENST00000013807 JMJD7-PLA2G4BH0Y9G9 81 aa7.65□□□□□ -1.18
ERCC1-201ENST00000013807 C8orf17Q9NRJ1 99 aa7.65□□□□□ -1.18
ERCC1-201ENST00000013807 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
ERCC1-201ENST00000013807 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
ERCC1-201ENST00000013807 PDE6GP18545 87 aa7.63□□□□□ -1.19
ERCC1-201ENST00000013807 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
ERCC1-201ENST00000013807 IGKV3D-7A0A0C4DH55 119 aa7.62□□□□□ -1.19
ERCC1-201ENST00000013807 WFDC13Q8IUB5 93 aa7.6□□□□□ -1.19
ERCC1-201ENST00000013807 LINC00846Q9NV44 126 aa7.6□□□□□ -1.19
ERCC1-201ENST00000013807 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
ERCC1-201ENST00000013807 ATXN8Q156A1 80 aa7.59□□□□□ -1.19
ERCC1-201ENST00000013807 Q6ZVQ6 151 aa7.59□□□□□ -1.19
ERCC1-201ENST00000013807 PRR15Q8IV56 129 aa7.58□□□□□ -1.2
ERCC1-201ENST00000013807 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
ERCC1-201ENST00000013807 M0R143 59 aa7.53□□□□□ -1.2
ERCC1-201ENST00000013807 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
ERCC1-201ENST00000013807 SYNE2Q8WXH0 6885 aaKnown RBP7.53□□□□□ -1.2
ERCC1-201ENST00000013807 MMP24-AS1A0A0U1RRL7 71 aa7.52□□□□□ -1.21
ERCC1-201ENST00000013807 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
ERCC1-201ENST00000013807 C14orf132Q9NPU4 83 aa7.52□□□□□ -1.21
ERCC1-201ENST00000013807 NREPQ16612 68 aa7.51□□□□□ -1.21
ERCC1-201ENST00000013807 H1FX-AS1Q4G0G2 97 aa7.5□□□□□ -1.21
ERCC1-201ENST00000013807 NAA38Q9BRA0 125 aaKnown RBP7.49□□□□□ -1.21
ERCC1-201ENST00000013807 hDV103S1A0JD37 113 aa7.46□□□□□ -1.22
ERCC1-201ENST00000013807 K7EQZ3 153 aa7.43□□□□□ -1.22
ERCC1-201ENST00000013807 SMIM6P0DI80 62 aa7.41□□□□□ -1.22
ERCC1-201ENST00000013807 Q5W150 140 aa7.39□□□□□ -1.23
ERCC1-201ENST00000013807 H3BT86 120 aa7.38□□□□□ -1.23
ERCC1-201ENST00000013807 NDUFS5O43920 106 aa7.38□□□□□ -1.23
ERCC1-201ENST00000013807 KRTAP6-3Q3LI67 103 aa7.38□□□□□ -1.23
ERCC1-201ENST00000013807 C7orf65Q6ZTY9 151 aa7.37□□□□□ -1.23
ERCC1-201ENST00000013807 BPY2O14599 106 aa7.36□□□□□ -1.23
ERCC1-201ENST00000013807 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
ERCC1-201ENST00000013807 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
ERCC1-201ENST00000013807 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
ERCC1-201ENST00000013807 C9orf118A6NHY6 69 aa7.3□□□□□ -1.24
ERCC1-201ENST00000013807 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
ERCC1-201ENST00000013807 A0A1W2PPM0 123 aa7.27□□□□□ -1.25
ERCC1-201ENST00000013807 HCG22E2RYF7 251 aa7.27□□□□□ -1.25
ERCC1-201ENST00000013807 CXCL6P80162 114 aa7.27□□□□□ -1.25
ERCC1-201ENST00000013807 C4orf26Q17RF5 130 aa7.27□□□□□ -1.25
ERCC1-201ENST00000013807 TSTD3H0UI37 97 aa7.26□□□□□ -1.25
ERCC1-201ENST00000013807 TAX1BP3O14907 124 aa7.25□□□□□ -1.25
ERCC1-201ENST00000013807 BATFQ16520 125 aa7.25□□□□□ -1.25
ERCC1-201ENST00000013807 Q8N9L7 120 aa7.25□□□□□ -1.25
ERCC1-201ENST00000013807 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
ERCC1-201ENST00000013807 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
ERCC1-201ENST00000013807 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
ERCC1-201ENST00000013807 MT1BP07438 61 aa7.18□□□□□ -1.26
ERCC1-201ENST00000013807 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
ERCC1-201ENST00000013807 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
ERCC1-201ENST00000013807 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
ERCC1-201ENST00000013807 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
ERCC1-201ENST00000013807 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
ERCC1-201ENST00000013807 A6NN06 94 aa7.14□□□□□ -1.27
ERCC1-201ENST00000013807 S4R3F8 94 aa7.14□□□□□ -1.27
ERCC1-201ENST00000013807 Q5VV11 94 aa7.13□□□□□ -1.27
ERCC1-201ENST00000013807 UBL5Q9BZL1 73 aa7.13□□□□□ -1.27
ERCC1-201ENST00000013807 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
ERCC1-201ENST00000013807 SPCS1Q9Y6A9 102 aa7.12□□□□□ -1.27
ERCC1-201ENST00000013807 LCA10Q71F78 164 aa7.11□□□□□ -1.27
ERCC1-201ENST00000013807 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
ERCC1-201ENST00000013807 PRO0461Q9UI25 63 aa7.09□□□□□ -1.27
ERCC1-201ENST00000013807 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
ERCC1-201ENST00000013807 NEBP20929 6669 aa7.06□□□□□ -1.28
ERCC1-201ENST00000013807 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
ERCC1-201ENST00000013807 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
ERCC1-201ENST00000013807 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
ERCC1-201ENST00000013807 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
ERCC1-201ENST00000013807 K7EP34 96 aa6.98□□□□□ -1.29
ERCC1-201ENST00000013807 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
ERCC1-201ENST00000013807 A0A1B0GV90 55 aa6.97□□□□□ -1.29
ERCC1-201ENST00000013807 COL5A1-AS1Q5SY13 56 aa6.97□□□□□ -1.29
ERCC1-201ENST00000013807 PCP4P48539 62 aa6.95□□□□□ -1.3
ERCC1-201ENST00000013807 A0A087WVE0 104 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms