RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 A0A087X002 238 aa2.45□□□□□ -2.02
CFTR-201ENST00000003084 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
CFTR-201ENST00000003084 LRBAP50851 2863 aa2.44□□□□□ -2.02
CFTR-201ENST00000003084 ACANP16112 2415 aa2.44□□□□□ -2.02
CFTR-201ENST00000003084 R4GN34 69 aa2.43□□□□□ -2.02
CFTR-201ENST00000003084 A8MU10 97 aa2.43□□□□□ -2.02
CFTR-201ENST00000003084 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
CFTR-201ENST00000003084 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
CFTR-201ENST00000003084 EPG5Q9HCE0 2579 aa2.42□□□□□ -2.02
CFTR-201ENST00000003084 HECTD1Q9ULT8 2610 aa2.42□□□□□ -2.02
CFTR-201ENST00000003084 MTORP42345 2549 aa2.42□□□□□ -2.02
CFTR-201ENST00000003084 RPL37P61927 97 aaKnown RBP2.42□□□□□ -2.02
CFTR-201ENST00000003084 KRTAP7-1Q8IUC3 87 aa2.42□□□□□ -2.02
CFTR-201ENST00000003084 MAP1AP78559 2803 aaPredicted RBP2.41□□□□□ -2.02
CFTR-201ENST00000003084 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
CFTR-201ENST00000003084 FLNAP21333 2647 aaKnown RBP2.41□□□□□ -2.02
CFTR-201ENST00000003084 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.03
CFTR-201ENST00000003084 ITPR3Q14573 2671 aa2.4□□□□□ -2.03
CFTR-201ENST00000003084 HELZ2Q9BYK8 2649 aaKnown RBP2.39□□□□□ -2.03
CFTR-201ENST00000003084 M0QZ58 72 aa2.39□□□□□ -2.03
CFTR-201ENST00000003084 ADM2Q7Z4H4 148 aa2.39□□□□□ -2.03
CFTR-201ENST00000003084 USP24Q9UPU5 2620 aa2.39□□□□□ -2.03
CFTR-201ENST00000003084 CSMD3Q7Z407 3707 aa2.37□□□□□ -2.03
CFTR-201ENST00000003084 NOTCH2NLQ7Z3S9 236 aa2.37□□□□□ -2.03
CFTR-201ENST00000003084 Q5VV11 94 aa2.36□□□□□ -2.03
CFTR-201ENST00000003084 A8MUU9 505 aa2.36□□□□□ -2.03
CFTR-201ENST00000003084 ROMO1P60602 79 aa2.36□□□□□ -2.03
CFTR-201ENST00000003084 ZNF292O60281 2723 aa2.36□□□□□ -2.03
CFTR-201ENST00000003084 C20orf166-AS1Q96NR2 134 aa2.35□□□□□ -2.03
CFTR-201ENST00000003084 HRNRQ86YZ3 2850 aaPredicted RBP2.34□□□□□ -2.03
CFTR-201ENST00000003084 COL7A1Q02388 2944 aa2.34□□□□□ -2.04
CFTR-201ENST00000003084 SETD2Q9BYW2 2564 aaPredicted RBP2.33□□□□□ -2.04
CFTR-201ENST00000003084 KRTAP1-4P0C5Y4 121 aa2.33□□□□□ -2.04
CFTR-201ENST00000003084 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
CFTR-201ENST00000003084 CYSTM1Q9H1C7 97 aa2.32□□□□□ -2.04
CFTR-201ENST00000003084 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
CFTR-201ENST00000003084 MXRA5Q9NR99 2828 aa2.31□□□□□ -2.04
CFTR-201ENST00000003084 IGSF10Q6WRI0 2623 aa2.31□□□□□ -2.04
CFTR-201ENST00000003084 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
CFTR-201ENST00000003084 NF1P21359 2839 aa2.3□□□□□ -2.04
CFTR-201ENST00000003084 SPATA8Q6RVD6 105 aa2.3□□□□□ -2.04
CFTR-201ENST00000003084 KRTAP17-1Q9BYP8 105 aa2.3□□□□□ -2.04
CFTR-201ENST00000003084 CFAP46Q8IYW2 2715 aa2.3□□□□□ -2.04
CFTR-201ENST00000003084 ZNF469Q96JG9 3925 aaPredicted RBP2.29□□□□□ -2.04
CFTR-201ENST00000003084 ATRQ13535 2644 aa2.29□□□□□ -2.04
CFTR-201ENST00000003084 FLNBO75369 2602 aaKnown RBP2.29□□□□□ -2.04
CFTR-201ENST00000003084 UNC79Q9P2D8 2635 aa2.29□□□□□ -2.04
CFTR-201ENST00000003084 BAHCC1Q9P281 2608 aa2.27□□□□□ -2.05
CFTR-201ENST00000003084 ITPR1Q14643 2758 aa2.26□□□□□ -2.05
CFTR-201ENST00000003084 ZANQ9Y493 2812 aa2.26□□□□□ -2.05
CFTR-201ENST00000003084 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
CFTR-201ENST00000003084 MAST4O15021 2626 aa2.26□□□□□ -2.05
CFTR-201ENST00000003084 CHD6Q8TD26 2715 aa2.26□□□□□ -2.05
CFTR-201ENST00000003084 TRRAPQ9Y4A5 3859 aa2.25□□□□□ -2.05
CFTR-201ENST00000003084 MGAM2Q2M2H8 2515 aa2.25□□□□□ -2.05
CFTR-201ENST00000003084 KRTAP13-3Q3SY46 172 aa2.25□□□□□ -2.05
CFTR-201ENST00000003084 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
CFTR-201ENST00000003084 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
CFTR-201ENST00000003084 TEP1Q99973 2627 aaKnown RBP2.23□□□□□ -2.05
CFTR-201ENST00000003084 P0C880 135 aa2.23□□□□□ -2.05
CFTR-201ENST00000003084 TNP1P09430 55 aa2.23□□□□□ -2.05
CFTR-201ENST00000003084 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
CFTR-201ENST00000003084 APCP25054 2843 aa2.22□□□□□ -2.05
CFTR-201ENST00000003084 ANK3Q12955 4377 aaKnown RBP2.22□□□□□ -2.05
CFTR-201ENST00000003084 PDZD2O15018 2839 aa2.22□□□□□ -2.05
CFTR-201ENST00000003084 LYSTQ99698 3801 aa2.21□□□□□ -2.06
CFTR-201ENST00000003084 VWFP04275 2813 aa2.21□□□□□ -2.06
CFTR-201ENST00000003084 UBR5O95071 2799 aaPredicted RBP2.2□□□□□ -2.06
CFTR-201ENST00000003084 FBN2P35556 2912 aa2.2□□□□□ -2.06
CFTR-201ENST00000003084 UTP20O75691 2785 aaKnown RBP2.2□□□□□ -2.06
CFTR-201ENST00000003084 ITPR2Q14571 2701 aa2.19□□□□□ -2.06
CFTR-201ENST00000003084 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
CFTR-201ENST00000003084 FBN1P35555 2871 aaKnown RBP2.19□□□□□ -2.06
CFTR-201ENST00000003084 LOC100996750A0A140TA64 210 aa2.19□□□□□ -2.06
CFTR-201ENST00000003084 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
CFTR-201ENST00000003084 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
CFTR-201ENST00000003084 SETXQ7Z333 2677 aaKnown RBP2.18□□□□□ -2.06
CFTR-201ENST00000003084 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
CFTR-201ENST00000003084 CMYA5Q8N3K9 4069 aa2.18□□□□□ -2.06
CFTR-201ENST00000003084 A6NN06 94 aa2.18□□□□□ -2.06
CFTR-201ENST00000003084 KRTAP10-10P60014 251 aa2.18□□□□□ -2.06
CFTR-201ENST00000003084 ALMS1Q8TCU4 4167 aa2.17□□□□□ -2.06
CFTR-201ENST00000003084 TEX15Q9BXT5 2789 aa2.17□□□□□ -2.06
CFTR-201ENST00000003084 ANK2Q01484 3957 aa2.16□□□□□ -2.06
CFTR-201ENST00000003084 COL6A5A8TX70 2615 aa2.16□□□□□ -2.06
CFTR-201ENST00000003084 KRTAP9-6A0A140TA67 174 aa2.16□□□□□ -2.06
CFTR-201ENST00000003084 NSD1Q96L73 2696 aaPredicted RBP2.16□□□□□ -2.06
CFTR-201ENST00000003084 KRTAP12-2P59991 146 aa2.15□□□□□ -2.07
CFTR-201ENST00000003084 HIVEP1P15822 2718 aa2.15□□□□□ -2.07
CFTR-201ENST00000003084 FLNCQ14315 2725 aa2.14□□□□□ -2.07
CFTR-201ENST00000003084 GCN1Q92616 2671 aaKnown RBP2.14□□□□□ -2.07
CFTR-201ENST00000003084 KRTAP4-8Q9BYQ9 185 aa2.14□□□□□ -2.07
CFTR-201ENST00000003084 CENPEQ02224 2701 aa2.11□□□□□ -2.07
CFTR-201ENST00000003084 H0YAA0 97 aa2.11□□□□□ -2.07
CFTR-201ENST00000003084 TENM4Q6N022 2769 aa2.11□□□□□ -2.07
CFTR-201ENST00000003084 STAB1Q9NY15 2570 aa2.1□□□□□ -2.07
CFTR-201ENST00000003084 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
CFTR-201ENST00000003084 LCE4AQ5TA78 99 aa2.09□□□□□ -2.08
CFTR-201ENST00000003084 KRTAP9-2Q9BYQ4 174 aa2.09□□□□□ -2.08
CFTR-201ENST00000003084 HUWE1Q7Z6Z7 4374 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms