RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939		F8WEM9	126 aa		8.34	□□□□□ -1.07
PHGDH-231	ENST00000641939	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	8.34	□□□□□ -1.07
PHGDH-231	ENST00000641939	PYY3	Q5JQD4	70 aa		8.33	□□□□□ -1.08
PHGDH-231	ENST00000641939		Q5XG85	94 aa		8.33	□□□□□ -1.08
PHGDH-231	ENST00000641939	CEND1	Q8N111	149 aa		8.33	□□□□□ -1.08
PHGDH-231	ENST00000641939	ASB16-AS1	Q495Z4	193 aa		8.31	□□□□□ -1.08
PHGDH-231	ENST00000641939	TMA7	Q9Y2S6	64 aa	Known RBP	8.31	□□□□□ -1.08
PHGDH-231	ENST00000641939	TMEM238L	A0A1B0GVL6	79 aa		8.3	□□□□□ -1.08
PHGDH-231	ENST00000641939		A6NJY4	79 aa		8.3	□□□□□ -1.08
PHGDH-231	ENST00000641939	PPDPFL	Q8WWR9	84 aa		8.3	□□□□□ -1.08
PHGDH-231	ENST00000641939	IGLV8-61	A0A075B6I0	122 aa		8.29	□□□□□ -1.08
PHGDH-231	ENST00000641939	SEC61B	P60468	96 aa	Known RBP	8.29	□□□□□ -1.08
PHGDH-231	ENST00000641939		Q6JHZ5	121 aa		8.29	□□□□□ -1.08
PHGDH-231	ENST00000641939		H0YGX0	51 aa		8.28	□□□□□ -1.08
PHGDH-231	ENST00000641939	SNCG	O76070	127 aa		8.28	□□□□□ -1.08
PHGDH-231	ENST00000641939	XP32	Q5T750	250 aa		8.28	□□□□□ -1.08
PHGDH-231	ENST00000641939	PRO1854	Q9UHT4	67 aa		8.28	□□□□□ -1.08
PHGDH-231	ENST00000641939	FAT4	Q6V0I7	4981 aa		8.27	□□□□□ -1.09
PHGDH-231	ENST00000641939	FXYD2	P54710	66 aa		8.27	□□□□□ -1.09
PHGDH-231	ENST00000641939	OCIAD2	Q56VL3	154 aa		8.27	□□□□□ -1.09
PHGDH-231	ENST00000641939	C1orf195	Q5TG92	126 aa		8.27	□□□□□ -1.09
PHGDH-231	ENST00000641939	SNHG12	Q9BXW3	62 aa		8.27	□□□□□ -1.09
PHGDH-231	ENST00000641939	TCL1B	O95988	128 aa		8.26	□□□□□ -1.09
PHGDH-231	ENST00000641939	CLEC2B	Q92478	149 aa		8.26	□□□□□ -1.09
PHGDH-231	ENST00000641939	IGFL1	Q6UW32	110 aa		8.25	□□□□□ -1.09
PHGDH-231	ENST00000641939	C9orf92	A6NGG3	77 aa		8.24	□□□□□ -1.09
PHGDH-231	ENST00000641939	HSD52	Q0P140	79 aa		8.24	□□□□□ -1.09
PHGDH-231	ENST00000641939	FAM218A	Q96MZ4	157 aa		8.24	□□□□□ -1.09
PHGDH-231	ENST00000641939	TRBV7-7	A0A0K0K1E9	115 aa		8.21	□□□□□ -1.1
PHGDH-231	ENST00000641939		A0A1B0GX51	115 aa		8.21	□□□□□ -1.1
PHGDH-231	ENST00000641939	UQCR10	Q9UDW1	63 aa		8.21	□□□□□ -1.1
PHGDH-231	ENST00000641939		H3BUT2	72 aa		8.2	□□□□□ -1.1
PHGDH-231	ENST00000641939	TRIAP1	O43715	76 aa		8.2	□□□□□ -1.1
PHGDH-231	ENST00000641939	KRTAP4-1	Q9BYQ7	146 aa		8.19	□□□□□ -1.1
PHGDH-231	ENST00000641939	GHRH	P01286	108 aa		8.18	□□□□□ -1.1
PHGDH-231	ENST00000641939		K7ERJ3	54 aa		8.17	□□□□□ -1.1
PHGDH-231	ENST00000641939	NDUFV3	P56181	108 aa	Known RBP	8.17	□□□□□ -1.1
PHGDH-231	ENST00000641939	PSMB2	P49721	201 aa		8.15	□□□□□ -1.1
PHGDH-231	ENST00000641939	LCE2A	Q5TA79	106 aa	Predicted RBP	8.15	□□□□□ -1.1
PHGDH-231	ENST00000641939	FABP2	P12104	132 aa		8.14	□□□□□ -1.11
PHGDH-231	ENST00000641939		H3BMG7	143 aa		8.13	□□□□□ -1.11
PHGDH-231	ENST00000641939	COX6C	P09669	75 aa		8.13	□□□□□ -1.11
PHGDH-231	ENST00000641939	PCOTH	Q58A44	107 aa		8.13	□□□□□ -1.11
PHGDH-231	ENST00000641939		Q6Q795	121 aa		8.13	□□□□□ -1.11
PHGDH-231	ENST00000641939	DNAL4	O96015	105 aa		8.12	□□□□□ -1.11
PHGDH-231	ENST00000641939	TEN1	Q86WV5	123 aa		8.12	□□□□□ -1.11
PHGDH-231	ENST00000641939	LST1	O00453	97 aa		8.11	□□□□□ -1.11
PHGDH-231	ENST00000641939	SS18L2	Q9UHA2	77 aa		8.11	□□□□□ -1.11
PHGDH-231	ENST00000641939	KRTAP9-2	Q9BYQ4	174 aa		8.1	□□□□□ -1.11
PHGDH-231	ENST00000641939	ORMDL1	Q9P0S3	153 aa		8.1	□□□□□ -1.11
PHGDH-231	ENST00000641939		H3BQ85	93 aa		8.09	□□□□□ -1.11
PHGDH-231	ENST00000641939	RPL37	P61927	97 aa	Known RBP	8.08	□□□□□ -1.12
PHGDH-231	ENST00000641939		A0A087WSZ3	146 aa		8.06	□□□□□ -1.12
PHGDH-231	ENST00000641939	TMEM256-PLSCR3	K7ERE1	68 aa		8.06	□□□□□ -1.12
PHGDH-231	ENST00000641939	SCGB1C2	P0DMR2	95 aa		8.04	□□□□□ -1.12
PHGDH-231	ENST00000641939		A0A1W2PNM2	257 aa		8.03	□□□□□ -1.12
PHGDH-231	ENST00000641939	TRAC	P01848	142 aa		8.03	□□□□□ -1.12
PHGDH-231	ENST00000641939	ANKRD29	Q8N6D5	301 aa		8.03	□□□□□ -1.12
PHGDH-231	ENST00000641939	OBSCN-AS1	Q96MR7	158 aa		8.03	□□□□□ -1.12
PHGDH-231	ENST00000641939		A0A1B0GV72	72 aa		8.02	□□□□□ -1.13
PHGDH-231	ENST00000641939	SMIM6	P0DI80	62 aa		8.01	□□□□□ -1.13
PHGDH-231	ENST00000641939	UBE2V1	Q13404	147 aa		8.01	□□□□□ -1.13
PHGDH-231	ENST00000641939		M0R143	59 aa		8	□□□□□ -1.13
PHGDH-231	ENST00000641939		Q96NJ1	140 aa		8	□□□□□ -1.13
PHGDH-231	ENST00000641939	TRBV7-4	A0A0J9YYF1	115 aa		7.99	□□□□□ -1.13
PHGDH-231	ENST00000641939	LCE2C	Q5TA81	110 aa		7.97	□□□□□ -1.13
PHGDH-231	ENST00000641939		Q75L30	129 aa		7.97	□□□□□ -1.13
PHGDH-231	ENST00000641939	CCK	P06307	115 aa		7.96	□□□□□ -1.14
PHGDH-231	ENST00000641939	KRTAP19-2	Q3LHN2	52 aa		7.96	□□□□□ -1.14
PHGDH-231	ENST00000641939	RBM3	P98179	157 aa	Known RBP	7.94	□□□□□ -1.14
PHGDH-231	ENST00000641939	ATP11AUN	Q6ZP68	121 aa		7.94	□□□□□ -1.14
PHGDH-231	ENST00000641939	SIGMAR1	Q99720	223 aa		7.94	□□□□□ -1.14
PHGDH-231	ENST00000641939	BAALC-AS2	P0C853	105 aa		7.93	□□□□□ -1.14
PHGDH-231	ENST00000641939	NAA38	Q9BRA0	125 aa	Known RBP	7.92	□□□□□ -1.14
PHGDH-231	ENST00000641939	TSTD3	H0UI37	97 aa		7.91	□□□□□ -1.14
PHGDH-231	ENST00000641939	IGKV4-1	P06312	121 aa		7.91	□□□□□ -1.14
PHGDH-231	ENST00000641939	ATXN8	Q156A1	80 aa		7.91	□□□□□ -1.14
PHGDH-231	ENST00000641939	C20orf166-AS1	Q96NR2	134 aa		7.91	□□□□□ -1.14
PHGDH-231	ENST00000641939	DSCR8	Q96T75	97 aa		7.91	□□□□□ -1.14
PHGDH-231	ENST00000641939	KRTAP9-6	A0A140TA67	174 aa		7.9	□□□□□ -1.14
PHGDH-231	ENST00000641939	VPS25	Q9BRG1	176 aa		7.9	□□□□□ -1.14
PHGDH-231	ENST00000641939		A8MUU9	505 aa		7.89	□□□□□ -1.15
PHGDH-231	ENST00000641939	DSCR10	P59022	87 aa		7.89	□□□□□ -1.15
PHGDH-231	ENST00000641939	LINC00472	Q9H8W2	130 aa		7.89	□□□□□ -1.15
PHGDH-231	ENST00000641939		C9JAW5	83 aa		7.87	□□□□□ -1.15
PHGDH-231	ENST00000641939	DEFB116	Q30KQ4	102 aa		7.87	□□□□□ -1.15
PHGDH-231	ENST00000641939	LOC105371267	A0A1B0GV96	52 aa		7.86	□□□□□ -1.15
PHGDH-231	ENST00000641939	LINC00313	P59037	77 aa		7.86	□□□□□ -1.15
PHGDH-231	ENST00000641939	MT1H	P80294	61 aa		7.86	□□□□□ -1.15
PHGDH-231	ENST00000641939	BATF	Q16520	125 aa		7.85	□□□□□ -1.15
PHGDH-231	ENST00000641939	LYRM7	Q5U5X0	104 aa		7.85	□□□□□ -1.15
PHGDH-231	ENST00000641939	COX6B2	Q6YFQ2	88 aa		7.84	□□□□□ -1.15
PHGDH-231	ENST00000641939	FLG	P20930	4061 aa	Predicted RBP	7.83	□□□□□ -1.16
PHGDH-231	ENST00000641939	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.83	□□□□□ -1.16
PHGDH-231	ENST00000641939	C21orf62-AS1	Q17RA5	79 aa		7.83	□□□□□ -1.16
PHGDH-231	ENST00000641939	TRBV20-1	A0A075B6N2	111 aa		7.82	□□□□□ -1.16
PHGDH-231	ENST00000641939	KRTAP16-1	A8MUX0	517 aa		7.81	□□□□□ -1.16
PHGDH-231	ENST00000641939	IGHV6-1	A0A0B4J1U7	121 aa		7.8	□□□□□ -1.16
PHGDH-231	ENST00000641939		Q6ZQT0	140 aa		7.8	□□□□□ -1.16
PHGDH-231	ENST00000641939	NOTCH2NL	Q7Z3S9	236 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms